Literature DB >> 22968950

A new versatile system for rapid control of gene expression in the fission yeast Schizosaccharomyces pombe.

Nicola Zilio1, Sophie Wehrkamp-Richter, Michael Nicholas Boddy.   

Abstract

The ability to regulate the expression of a gene greatly aids the process of uncovering its functions. The fission yeast Schizosaccharomyces pombe has so far lacked a system for rapidly controlling the expression of chromosomal genes, hindering its full potential as a model organism. Although the widely used nmt1 promoter displays a wide dynamic range of activity, it takes > 14-15 h to derepress. The urg1 promoter also shows a large dynamic range and can be induced quickly (< 2 h), but its implementation requires laborious strain construction and it cannot be used to study meiosis. To overcome these limitations, we constructed a tetracycline-regulated system for inducible expression of chromosomal genes in fission yeast, which is easily established and implemented. In this system the promoter of a gene is replaced by simple one-step substitution techniques with a tetracycline-regulated promoter cassette (tetO(7) -TATA(CYC1) ) in cells where TetR/TetR'-based transcription activators/repressors are also produced. Using top1 and nse6 as reporter genes, we show that Top1 and Nse6 appear after just 30 min of activating tetO(7) -TATA(CYC1) and plateau after -4-6 h. The amount of synthesised protein is comparable to that produced from the attenuated nmt1 promoter P(nmt8) , which should be closer to wild-type levels for most genes than those generated from excessively strong promoters and can be controlled by changing the concentration of the effector antibiotic. This system also works efficiently during meiosis, thus making it a useful addition to the toolkit of the fission yeast community. 2012 John Wiley & Sons, Ltd

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Year:  2012        PMID: 22968950      PMCID: PMC3478897          DOI: 10.1002/yea.2920

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  25 in total

1.  A truncated derivative of nmt 1 promoter exhibits temperature-dependent induction of gene expression in Schizosaccharomyces pombe.

Authors:  Raj Kumar; Jagmohan Singh
Journal:  Yeast       Date:  2006-01-15       Impact factor: 3.239

2.  The Nse5-Nse6 dimer mediates DNA repair roles of the Smc5-Smc6 complex.

Authors:  Stephanie Pebernard; James Wohlschlegel; W Hayes McDonald; John R Yates; Michael N Boddy
Journal:  Mol Cell Biol       Date:  2006-03       Impact factor: 4.272

3.  Functional analysis of yeast essential genes using a promoter-substitution cassette and the tetracycline-regulatable dual expression system.

Authors:  G Bellí; E Garí; M Aldea; E Herrero
Journal:  Yeast       Date:  1998-09-15       Impact factor: 3.239

4.  An activator/repressor dual system allows tight tetracycline-regulated gene expression in budding yeast.

Authors:  G Bellí; E Garí; L Piedrafita; M Aldea; E Herrero
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

5.  Distinct TPR motifs of Cyc8 are involved in recruiting the Cyc8-Tup1 corepressor complex to differentially regulated promoters.

Authors:  D Tzamarias; K Struhl
Journal:  Genes Dev       Date:  1995-04-01       Impact factor: 11.361

6.  Functional dissection of the yeast Cyc8-Tup1 transcriptional co-repressor complex.

Authors:  D Tzamarias; K Struhl
Journal:  Nature       Date:  1994-06-30       Impact factor: 49.962

7.  Recombineering reagents for improved inducible expression and selection marker re-use in Schizosaccharomyces pombe.

Authors:  Axel Erler; Marcello Maresca; Jun Fu; A Francis Stewart
Journal:  Yeast       Date:  2006-08       Impact factor: 3.239

8.  Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe.

Authors:  J Bähler; J Q Wu; M S Longtine; N G Shah; A McKenzie; A B Steever; A Wach; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

9.  TATA box mutations in the Schizosaccharomyces pombe nmt1 promoter affect transcription efficiency but not the transcription start point or thiamine repressibility.

Authors:  G Basi; E Schmid; K Maundrell
Journal:  Gene       Date:  1993-01-15       Impact factor: 3.688

10.  Transient, meiosis-induced expression of the rec6 and rec12 genes of Schizosaccharomyces pombe.

Authors:  Y Lin; G R Smith
Journal:  Genetics       Date:  1994-03       Impact factor: 4.562

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  19 in total

1.  A second Wpl1 anti-cohesion pathway requires dephosphorylation of fission yeast kleisin Rad21 by PP4.

Authors:  Adrien Birot; Karen Eguienta; Stéphanie Vazquez; Stéphane Claverol; Marc Bonneu; Karl Ekwall; Jean-Paul Javerzat; Sabine Vaur
Journal:  EMBO J       Date:  2017-04-24       Impact factor: 11.598

2.  An estradiol-inducible promoter enables fast, graduated control of gene expression in fission yeast.

Authors:  Makoto J Ohira; David G Hendrickson; R Scott McIsaac; Nicholas Rhind
Journal:  Yeast       Date:  2017-06-08       Impact factor: 3.239

3.  Disentangling the molecular determinants for Cenp-F localization to nuclear pores and kinetochores.

Authors:  Alessandro Berto; Jinchao Yu; Stéphanie Morchoisne-Bolhy; Chiara Bertipaglia; Richard Vallee; Julien Dumont; Francoise Ochsenbein; Raphael Guerois; Valérie Doye
Journal:  EMBO Rep       Date:  2018-04-09       Impact factor: 8.807

4.  A novel histone deacetylase complex in the control of transcription and genome stability.

Authors:  Nicola Zilio; Sandra Codlin; Ajay A Vashisht; Danny A Bitton; Steven R Head; James A Wohlschlegel; Jürg Bähler; Michael N Boddy
Journal:  Mol Cell Biol       Date:  2014-07-07       Impact factor: 4.272

5.  Rapid regulation of nuclear proteins by rapamycin-induced translocation in fission yeast.

Authors:  Lin Ding; Dana Laor; Ronit Weisman; Susan L Forsburg
Journal:  Yeast       Date:  2014-04-29       Impact factor: 3.239

6.  Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex.

Authors:  Emily D Egan; Craig R Braun; Steven P Gygi; Danesh Moazed
Journal:  RNA       Date:  2014-04-08       Impact factor: 4.942

7.  Module-based construction of plasmids for chromosomal integration of the fission yeast Schizosaccharomyces pombe.

Authors:  Yasutaka Kakui; Tomonari Sunaga; Kunio Arai; James Dodgson; Liang Ji; Attila Csikász-Nagy; Rafael Carazo-Salas; Masamitsu Sato
Journal:  Open Biol       Date:  2015-06       Impact factor: 6.411

8.  Functional Crosstalk between the PP2A and SUMO Pathways Revealed by Analysis of STUbL Suppressor, razor 1-1.

Authors:  Minghua Nie; Emily Arner; John Prudden; Lana Schaffer; Steven Head; Michael N Boddy
Journal:  PLoS Genet       Date:  2016-07-11       Impact factor: 5.917

9.  Histone H2B ubiquitylation represses gametogenesis by opposing RSC-dependent chromatin remodeling at the ste11 master regulator locus.

Authors:  Philippe Materne; Enrique Vázquez; Mar Sánchez; Carlo Yague-Sanz; Jayamani Anandhakumar; Valerie Migeot; Francisco Antequera; Damien Hermand
Journal:  Elife       Date:  2016-05-12       Impact factor: 8.140

10.  The Loss of Lam2 and Npr2-Npr3 Diminishes the Vacuolar Localization of Gtr1-Gtr2 and Disinhibits TORC1 Activity in Fission Yeast.

Authors:  Ning Ma; Yan Ma; Akio Nakashima; Ushio Kikkawa; Tomoyuki Furuyashiki
Journal:  PLoS One       Date:  2016-05-26       Impact factor: 3.240

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