| Literature DB >> 22967353 |
Michael Scott Killian1, Girish N Vyas, Rochak Mehta, Karen Young, Osman Ebrahim.
Abstract
INTRODUCTION: Most individuals infected with human immunodeficiency virus-1, in the absence of antiretroviral therapy, exhibit persistent virus replication and declining CD4+ cell numbers, and progress to acquired immunodeficiency syndrome within 10 years of infection. Elite controllers are rare individuals with human immunodeficiency virus-1 infection who can maintain undetectable plasma virus levels and remain asymptomatic without antiretroviral therapy. It has been proposed that elite controllers benefit from being infected with attenuated human immunodeficiency virus-1 variants. CASEEntities:
Year: 2012 PMID: 22967353 PMCID: PMC3469400 DOI: 10.1186/1752-1947-6-291
Source DB: PubMed Journal: J Med Case Rep ISSN: 1752-1947
Figure 1Longitudinal measurements of CD4+ cells and human immunodeficiency virus-1 levels. During a period of 10 years, CD4+ cell percentages and absolute counts were monitored in blood from patient MM. Also performed were measurements of human immunodeficiency virus-1 ribonucleic acid, deoxyribonucleic acid, and p24 levels and anti-human immunodeficiency virus-1 antibodies. EIA, enzymatic immunoassay; (+), positive test result; (-), negative test result; n.d., test not performed; HIV-1, human immunodeficiency virus-1; PCR-RNA, polymerase chain reaction-ribonucleic acid; PCR-DNA, polymerase chain reaction-deoxyribonucleic acid.
Figure 2Analysis of the patients’ human immunodeficiency virus-1 sequencesA highly-conserved 255 base pair region of the human immunodeficiency virus-1 gag gene was sequenced. (A) Shown are the nucleotide sequences obtained from FF and MM, as compared with the consensus human immunodeficiency virus-1 clade C sequence. Standard ambiguity codes are used (R = G or A; Y = T or C). (B) The human immunodeficiency virus-1 gag sequences from MM and FF, along with 27 human immunodeficiency virus-1 clade C sequences from South Africa, were aligned and then analyzed with the PhyML tool [8]. Shown is a phylogenetic tree made with the maximum likelihood method. The human immunodeficiency virus-1 clade B HXB2 gag sequence is included as an outgroup. GenBank accession numbers are given for the comparison sequences. (C) The human immunodeficiency virus-1 gag sequence from MM was compared with other human immunodeficiency virus-1 clade C viruses published in the Los Alamos human immunodeficiency virus-1 database using the QuickAlign tool [8]. Shown is a frequency histogram of the published clade C sequences based on the number of nucleotides that differ from the MM human immunodeficiency virus-1 gag sequence.