Literature DB >> 22966888

Integrative systems biology approaches in asthma pharmacogenomics.

Amber Dahlin1, Kelan G Tantisira.   

Abstract

In order to improve therapeutic outcomes, there is a tremendous need to identify patients who are likely to respond to a given asthma treatment. Pharmacogenomic studies have explained a portion of the variability in drug response and provided an increasing list of candidate genes and SNPs. However, as phenotypic variation arises from a network of complex interactions among genetic and environmental factors, rather than individual genes or SNPs, a multidisciplinary, systems-level approach is required in order to understand the inter-relationships among these factors. Systems biology, which seeks to capture interactions between genetic factors and other variables, offers a promising approach to improved therapeutic outcomes in asthma. This aritcle will review and update progress in the pharmacogenomics of asthma and then discuss the application of systems biology approaches to asthma pharmacogenomics.

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Year:  2012        PMID: 22966888      PMCID: PMC3553555          DOI: 10.2217/pgs.12.126

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  118 in total

1.  The Childhood Asthma Management Program (CAMP): design, rationale, and methods. Childhood Asthma Management Program Research Group.

Authors: 
Journal:  Control Clin Trials       Date:  1999-02

2.  Prediction of chronic obstructive pulmonary disease (COPD) in asthma patients using electronic medical records.

Authors:  Blanca E Himes; Yi Dai; Isaac S Kohane; Scott T Weiss; Marco F Ramoni
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

Review 3.  Systems biology in pharmacogenomic research: the way to personalized prescribing?

Authors:  Ellen S Koster; Andrei S Rodin; Jan A M Raaijmakers; Anke-Hilse Maitland-van der Zee
Journal:  Pharmacogenomics       Date:  2009-06       Impact factor: 2.533

4.  Genetic variants of GSNOR and ADRB2 influence response to albuterol in African-American children with severe asthma.

Authors:  Paul E Moore; Kelli K Ryckman; Scott M Williams; Neal Patel; Marshall L Summar; James R Sheller
Journal:  Pediatr Pulmonol       Date:  2009-07

5.  Asthma pharmacogenetic study using finite mixture models to handle drug-response heterogeneity.

Authors:  Timothy P York; Cristina Vargas-Irwin; Wayne H Anderson; Edwin J C G van den Oord
Journal:  Pharmacogenomics       Date:  2009-05       Impact factor: 2.533

6.  Genome-wide association analysis identifies PDE4D as an asthma-susceptibility gene.

Authors:  Blanca E Himes; Gary M Hunninghake; James W Baurley; Nicholas M Rafaels; Patrick Sleiman; David P Strachan; Jemma B Wilk; Saffron A G Willis-Owen; Barbara Klanderman; Jessica Lasky-Su; Ross Lazarus; Amy J Murphy; Manuel E Soto-Quiros; Lydiana Avila; Terri Beaty; Rasika A Mathias; Ingo Ruczinski; Kathleen C Barnes; Juan C Celedón; William O C Cookson; W James Gauderman; Frank D Gilliland; Hakon Hakonarson; Christoph Lange; Miriam F Moffatt; George T O'Connor; Benjamin A Raby; Edwin K Silverman; Scott T Weiss
Journal:  Am J Hum Genet       Date:  2009-05-07       Impact factor: 11.025

Review 7.  Asthma genetics and genomics 2009.

Authors:  Scott T Weiss; Benjamin A Raby; Angela Rogers
Journal:  Curr Opin Genet Dev       Date:  2009-05-28       Impact factor: 5.578

Review 8.  Leukotriene pathway genetics and pharmacogenetics in allergy.

Authors:  N P Duroudier; A S Tulah; I Sayers
Journal:  Allergy       Date:  2009-03-26       Impact factor: 13.146

9.  The glucocorticoid receptor heterocomplex gene STIP1 is associated with improved lung function in asthmatic subjects treated with inhaled corticosteroids.

Authors:  Gregory A Hawkins; Ross Lazarus; Richard S Smith; Kelan G Tantisira; Deborah A Meyers; Stephen P Peters; Scott T Weiss; Eugene R Bleecker
Journal:  J Allergy Clin Immunol       Date:  2009-02-28       Impact factor: 10.793

10.  A graphical model approach for inferring large-scale networks integrating gene expression and genetic polymorphism.

Authors:  Jen-hwa Chu; Scott T Weiss; Vincent J Carey; Benjamin A Raby
Journal:  BMC Syst Biol       Date:  2009-05-27
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  7 in total

1.  Genetic risk factors for decreased bone mineral accretion in children with asthma receiving multiple oral corticosteroid bursts.

Authors:  Heung-Woo Park; Bing Ge; Szeman Tse; Elin Grundberg; Tomi Pastinen; H William Kelly; Kelan G Tantisira
Journal:  J Allergy Clin Immunol       Date:  2015-05-27       Impact factor: 10.793

Review 2.  Systems biology of asthma and allergic diseases: a multiscale approach.

Authors:  Supinda Bunyavanich; Eric E Schadt
Journal:  J Allergy Clin Immunol       Date:  2014-11-21       Impact factor: 10.793

Review 3.  Pharmacogenetics: implications of race and ethnicity on defining genetic profiles for personalized medicine.

Authors:  Victor E Ortega; Deborah A Meyers
Journal:  J Allergy Clin Immunol       Date:  2014-01       Impact factor: 10.793

Review 4.  Using systems approaches to address challenges for clinical implementation of pharmacogenomics.

Authors:  Jason H Karnes; Sara Van Driest; Erica A Bowton; Peter E Weeke; Jonathan D Mosley; Josh F Peterson; Joshua C Denny; Dan M Roden
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2013-12-06

5.  The Effect of Chinese Herbal Medicine Formula mKG on Allergic Asthma by Regulating Lung and Plasma Metabolic Alternations.

Authors:  Meng Yu; Hong-Mei Jia; Feng-Xia Cui; Yong Yang; Yang Zhao; Mao-Hua Yang; Zhong-Mei Zou
Journal:  Int J Mol Sci       Date:  2017-03-10       Impact factor: 5.923

6.  The phosphatidylinositide 3-kinase (PI3K) signaling pathway is a determinant of zileuton response in adults with asthma.

Authors:  Amber Dahlin; Weiliang Qiu; Augusto A Litonjua; John J Lima; Mayumi Tamari; Michiaki Kubo; Charles G Irvin; Stephen P Peters; Ann C Wu; Scott T Weiss; Kelan G Tantisira
Journal:  Pharmacogenomics J       Date:  2018-01-03       Impact factor: 3.550

7.  Lung function, airway and peripheral basophils and eosinophils are associated with molecular pharmacogenomic endotypes of steroid response in severe asthma.

Authors:  Alvin T Kho; Michael J McGeachie; Jiang Li; Robert P Chase; Sami S Amr; Annette T Hastie; Gregory A Hawkins; Xingnan Li; Geoffrey L Chupp; Deborah A Meyers; Eugene R Bleecker; Scott T Weiss; Kelan G Tantisira
Journal:  Thorax       Date:  2021-09-27       Impact factor: 9.102

  7 in total

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