Literature DB >> 22966184

Complete genome sequence of a novel human enterovirus C (HEV-C117) identified in a child with community-acquired pneumonia.

Cristina Daleno1, Antonio Piralla, Alessia Scala, Fausto Baldanti, Vytautas Usonis, Nicola Principi, Susanna Esposito.   

Abstract

The new enterovirus C-117 strain belongs to the human enterovirus C species in the Picornaviridae family. We describe the characterization of the complete genome of this strain identified in a respiratory specimen of a child enrolled in the Community-Acquired Pneumonia Pediatric Research Initiative (CAP-PRI) study evaluating the etiology of community-acquired pneumonia (CAP).

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Year:  2012        PMID： 22966184      PMCID： PMC3457295          DOI： 10.1128/JVI.01721-12

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  7 in total

1.  Comparison of classic and molecular approaches for the identification of untypeable enteroviruses.

Authors:  M S Oberste; K Maher; M R Flemister; G Marchetti; D R Kilpatrick; M A Pallansch
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948

2.  Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens.

Authors:  W Allan Nix; M Steven Oberste; Mark A Pallansch
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

5.  Human enterovirus 109: a novel interspecies recombinant enterovirus isolated from a case of acute pediatric respiratory illness in Nicaragua.

Authors:  Nathan L Yozwiak; Peter Skewes-Cox; Aubree Gordon; Saira Saborio; Guillermina Kuan; Angel Balmaseda; Don Ganem; Eva Harris; Joseph L DeRisi
Journal:  J Virol       Date:  2010-06-30       Impact factor: 5.103

6.  Resolving ambiguities in genetic typing of human enterovirus species C clinical isolates and identification of enterovirus 96, 99 and 102.

Authors:  Betty A Brown; Kaija Maher; Mary R Flemister; Pejman Naraghi-Arani; Moyez Uddin; M Steven Oberste; Mark A Pallansch
Journal:  J Gen Virol       Date:  2009-03-04       Impact factor: 3.891

7.  Enterovirus 104 infection in adult, Japan, 2011.

Authors:  Atsushi Kaida; Hideyuki Kubo; Jun-ichiro Sekiguchi; Atsushi Hase; Nobuhiro Iritani
Journal:  Emerg Infect Dis       Date:  2012-05       Impact factor: 6.883
  7 in total
  15 in total

1.  Genomic analysis of coxsackieviruses A1, A19, A22, enteroviruses 113 and 104: viruses representing two clades with distinct tropism within enterovirus C.

Authors:  Rafal Tokarz; Saddef Haq; Stephen Sameroff; Stephen R C Howie; W Ian Lipkin
Journal:  J Gen Virol       Date:  2013-06-12       Impact factor: 3.891

2.  Respiratory infection with enterovirus genotype C117, China and Mongolia.

Authors:  Zichun Xiang; Sosorbaramyn Tsatsral; Chunyan Liu; Linlin Li; Lili Ren; Yan Xiao; Zhengde Xie; Hongli Zhou; Guy Vernet; Pagbajabyn Nymadawa; Kunling Shen; Jianwei Wang
Journal:  Emerg Infect Dis       Date:  2014-06       Impact factor: 6.883

3.  Circulation of multiple serotypes of highly divergent enterovirus C in the Xinjiang Uighur Autonomous Region of China.

Authors:  Yong Zhang; Qiang Sun; Hui Cui; Dongmei Yan; Qin Fan; Yang Song; Shuangli Zhu; Xiaolei Li; Guohong Huang; Tianjiao Ji; Lan Hu; Dongyan Wang; Qian Yang; Wenbo Xu
Journal:  Sci Rep       Date:  2016-09-19       Impact factor: 4.379

4.  Newly Identified Enterovirus C Genotypes, Identified in the Netherlands through Routine Sequencing of All Enteroviruses Detected in Clinical Materials from 2008 to 2015.

Authors:  Coretta C Van Leer-Buter; Randy Poelman; Renze Borger; Hubert G M Niesters
Journal:  J Clin Microbiol       Date:  2016-06-29       Impact factor: 5.948

5.  Enteroviruses as major cause of microbiologically unexplained acute respiratory tract infections in hospitalized pediatric patients.

Authors:  Fanny Renois; Nicolas Lévêque; Pierre-Guillaume Deliège; Caroline Fichel; Alexis Bouin; Michel Abely; Yohan N'guyen; Laurent Andréoletti
Journal:  J Infect       Date:  2013-03-28       Impact factor: 6.072

6.  Genome characterisation of enteroviruses 117 and 118: a new group within human enterovirus species C.

Authors:  Antonio Piralla; Cristina Daleno; Alessia Scala; David Greenberg; Vytautas Usonis; Nicola Principi; Fausto Baldanti; Susanna Esposito
Journal:  PLoS One       Date:  2013-04-02       Impact factor: 3.240

7.  Full Genome Sequence of a Novel Human Enterovirus C (EV-C118) Isolated from Two Children with Acute Otitis Media and Community-Acquired Pneumonia in Israel.

Authors:  Cristina Daleno; Antonio Piralla; Alessia Scala; Fausto Baldanti; David Greenberg; Nicola Principi; Susanna Esposito
Journal:  Genome Announc       Date:  2013-01-31

Review 8.  Rhinoviruses and Respiratory Enteroviruses: Not as Simple as ABC.

Authors:  Léna Royston; Caroline Tapparel
Journal:  Viruses       Date:  2016-01-11       Impact factor: 5.048

9.  Genetic characterization and molecular epidemiological analysis of novel enterovirus EV-B80 in China.

Authors:  Zhenzhi Han; Yong Zhang; Keqiang Huang; Hui Cui; Mei Hong; Haishu Tang; Yang Song; Qian Yang; Shuangli Zhu; Dongmei Yan; Wenbo Xu
Journal:  Emerg Microbes Infect       Date:  2018-11-28       Impact factor: 7.163

10.  Detection by Direct Next Generation Sequencing Analysis of Emerging Enterovirus D68 and C109 Strains in an Environmental Sample From Scotland.

Authors:  Manasi Majumdar; Javier Martin
Journal:  Front Microbiol       Date:  2018-08-21       Impact factor: 5.640
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