Literature DB >> 22965078

Draft genome sequence of Yersinia pestis strain 2501, an isolate from the great gerbil plague focus in Xinjiang, China.

Surong Sun1, Xianwei Yang, Yanting Yuan, Xiang Dai, Yanfeng Yan, Hanli Cao, Tao Luo, Rong Guo, Xinhui Wang, Yajun Song, Ruifu Yang, Yujiang Zhang, Yujun Cui.   

Abstract

We deciphered the genome of Yersinia pestis strain 2501, isolated from the Junggar Basin, a newly discovered great gerbil plague focus in Xinjiang, China. The total length of assembly was 4,597,322 bp, and 4,265 coding sequences were predicted within the genome. It is the first Y. pestis genome from this plague focus.

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Year:  2012        PMID： 22965078      PMCID： PMC3457213          DOI： 10.1128/JB.01150-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

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Authors: 
Journal:  Wkly Epidemiol Rec       Date:  2004-08-13

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

3.  De novo assembly of human genomes with massively parallel short read sequencing.

Authors:  Ruiqiang Li; Hongmei Zhu; Jue Ruan; Wubin Qian; Xiaodong Fang; Zhongbin Shi; Yingrui Li; Shengting Li; Gao Shan; Karsten Kristiansen; Songgang Li; Huanming Yang; Jian Wang; Jun Wang
Journal:  Genome Res       Date:  2009-12-17       Impact factor: 9.043

Review 4.  Yersinia pestis--etiologic agent of plague.

Authors:  R D Perry; J D Fetherston
Journal:  Clin Microbiol Rev       Date:  1997-01       Impact factor: 26.132

Review 5.  Intraspecific diversity of Yersinia pestis.

Authors:  Andrey P Anisimov; Luther E Lindler; Gerald B Pier
Journal:  Clin Microbiol Rev       Date:  2004-04       Impact factor: 26.132

6.  Modeling the epidemiological history of plague in Central Asia: palaeoclimatic forcing on a disease system over the past millennium.

Authors:  Kyrre Linné Kausrud; Mike Begon; Tamara Ben Ari; Hildegunn Viljugrein; Jan Esper; Ulf Büntgen; Herwig Leirs; Claudia Junge; Bao Yang; Meixue Yang; Lei Xu; Nils Chr Stenseth
Journal:  BMC Biol       Date:  2010-08-27       Impact factor: 7.431

7.  [Study on the situation of plague in Junggar Basin of China].

Authors:  Yu-Jiang Zhang; Xiang Dai; Wei Jiang; Xin-Hui Wang; Bing Li; Gang Lei; Wei-Wei Meng; Xiao-Bing Zhang; Qi-Guo Wang; Tao Luo; Rong Guo; Zhong Wang; Jian-Guo Tang; Cheng-Quan Liu; Rui-Yu Ye; Xin Yu; Han-Li Cao
Journal:  Zhonghua Liu Xing Bing Xue Za Zhi       Date:  2008-02

8.  Genotyping and phylogenetic analysis of Yersinia pestis by MLVA: insights into the worldwide expansion of Central Asia plague foci.

Authors:  Yanjun Li; Yujun Cui; Yolande Hauck; Mikhail E Platonov; Erhei Dai; Yajun Song; Zhaobiao Guo; Christine Pourcel; Svetlana V Dentovskaya; Andrey P Anisimov; Ruifu Yang; Gilles Vergnaud
Journal:  PLoS One       Date:  2009-06-22       Impact factor: 3.240

Review 9.  Plague: past, present, and future.

Authors:  Nils Chr Stenseth; Bakyt B Atshabar; Mike Begon; Steven R Belmain; Eric Bertherat; Elisabeth Carniel; Kenneth L Gage; Herwig Leirs; Lila Rahalison
Journal:  PLoS Med       Date:  2008-01-15       Impact factor: 11.069

10.  Insight into microevolution of Yersinia pestis by clustered regularly interspaced short palindromic repeats.

Authors:  Yujun Cui; Yanjun Li; Olivier Gorgé; Mikhail E Platonov; Yanfeng Yan; Zhaobiao Guo; Christine Pourcel; Svetlana V Dentovskaya; Sergey V Balakhonov; Xiaoyi Wang; Yajun Song; Andrey P Anisimov; Gilles Vergnaud; Ruifu Yang
Journal:  PLoS One       Date:  2008-07-09       Impact factor: 3.240
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