Literature DB >> 22961722

Cold-active hydrolases producing bacteria from two different sub-glacial Himalayan lakes.

Harmesh Sahay1, Bandamaravuri Kishore Babu, Surendra Singh, Rajeev Kaushik, Anil K Saxena, Dilip K Arora.   

Abstract

Microorganisms, native to the cold environments have successfully acclimatized their physiological, metabolic, and biological features, exhibiting uniqueness in their enzymes, proteins, and membrane structures. These cold-active enzymes have immense biotechnological potential. The diversity of culturable bacteria in two different water lakes (the sub-glacial freshwater and the brackish) of Himalayas was analyzed using SYBR green staining and cultural methods. A total of 140 bacteria were isolated and were grouped as psychrophiles, psychrotrophs, and psychrotolerant organisms, based on their optimal temperature for growth. The amplified ribosomal DNA restriction analysis using three restriction enzymes facilitated the grouping of these isolates into 96 genotypes at ≥85% polymorphism. Phylogenetic analysis using 16S rRNA gene sequences revealed that the bacterial strains from both lakes belonged to Firmicutes, Proteobacteria (α, β, and γ) or Actinobacteria. Screening of the germplasm for the activity of different cold-active hydrolases such as protease, amylase, xylanase, and cellulase, revealed that about 16 isolates were positive, and exhibiting a wide range of stability at various temperature and pH. Our results suggest that the distinctly different ecosystems of sub-glacial freshwater and brackish water lakes have diverse groups of bacteria, which can be an excellent source of extracellular hydrolases with a wide range of thermal stability.
© 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  16S rRNA gene; Cold-active hydrolases; Himalayan lakes; Psychrophiles

Mesh:

Substances:

Year:  2012        PMID: 22961722     DOI: 10.1002/jobm.201200126

Source DB:  PubMed          Journal:  J Basic Microbiol        ISSN: 0233-111X            Impact factor:   2.281


  6 in total

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4.  Culturable and culture-independent bacterial diversity and the prevalence of cold-adapted enzymes from the Himalayan mountain ranges of India and Nepal.

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Journal:  Microb Ecol       Date:  2014-09-10       Impact factor: 4.552

5.  Microbial diversity and soil physiochemical characteristic of higher altitude.

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Journal:  PLoS One       Date:  2019-03-15       Impact factor: 3.240

6.  Analysis on evolutionary relationship of amylases from archaea, bacteria and eukaryota.

Authors:  Shaomin Yan; Guang Wu
Journal:  World J Microbiol Biotechnol       Date:  2016-01-08       Impact factor: 3.312

  6 in total

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