| Literature DB >> 22960089 |
Hyun Soo Kim1, Jeongwon Hyun, Jae-Seok Kim, Wonkeun Song, Hee Jung Kang, Kyu Man Lee.
Abstract
The analytical and clinical performance of a new rapid immunochromatography test, the SD Bioline Norovirus test, was evaluated for the detection of human norovirus in fecal specimens. The analytical performance studies were performed for detection limit, reproducibility, cross-reactivity, and interference. For comparison, 92 norovirus-positive stool samples and 126 norovirus-negative samples for which the results were confirmed by 2 different real-time PCR kits were used. The rapid immunochromatography test detected the equivalent of 4.48×10(6) copies/mL of the norovirus genome in stool samples. On performing the repeatability/reproducibility test, samples above this concentration all provided positive results (100%) and 97.8% of the samples slightly below this concentration (2.45×10(6) copies/mL) provided negative results. No cross-reactivity or interference was detected. Positive percent agreement (sensitivity), negative percent agreement (specificity), and overall percent agreement of the rapid immunochromatography test compared with testing by real-time PCR were 90.2%, 100%, and 95.9%, respectively. In addition, the rapid immunochromatography test was completed within 20 min. The SD Bioline Norovirus test was, therefore, easier and more rapid to perform and showed excellent reproducibility, no cross-reactivity, no interference, and high agreement compared with real-time PCR. Thus, this test is useful for rapid screening to identity norovirus infection.Entities:
Mesh:
Year: 2012 PMID: 22960089 PMCID: PMC7119779 DOI: 10.1016/j.jviromet.2012.08.014
Source DB: PubMed Journal: J Virol Methods ISSN: 0166-0934 Impact factor: 2.014
Comparison of the results of rapid immunochromatography test and real-time PCR assays for the detection of norovirus in stools.
| Immunochromatography | Real-time PCR | No. of specimen (%) |
|---|---|---|
| Positive | Positive | 83 (38.1%) |
| Negative | Positive | 9 (4.1%) |
| Positive | Negative | 0 (0.0%) |
| Negative | Negative | 126 (57.8%) |
| Total | 218 (100%) |
Percent positive agreement of rapid immunochromatography test compared to PCR: 90.2% (83/92) (95% confidence interval, 82.2–95.4%).
Percent negative agreement of rapid immunochromatography test compared to PCR: 100% (126/126) (95% confidence interval, 97.1–100%).
Overall percent agreement of rapid immunochromatography test compared to PCR: 95.9% (209/218) (95% confidence interval, 92.3–98.1%).
Detectability of norovirus genotypes by the immunochromatography (ICG) test.
| Genotype | No. of samples | No. of ICG-positive samples | Detection rate |
|---|---|---|---|
| GI.3 | 1 | 1 | 100% |
| GII.3 | 14 | 14 | 100% |
| GII.4 | 65 | 59 | 90.8% |
| GII.6 | 1 | 1 | 100% |
| GII.12 | 2 | 1 | 50% |
| GII, untyped | 9 | 7 | 77.8% |
| Total | 92 | 83 | 90.2% |
Specimens showing discrepant results between the rapid ICG test and the real-time PCR assays for the detection of norovirus in stool.
| Specimen | ICG | Real-time PCR (Ct by A kit | Real-time PCR (Ct by B kit | Genotype | Age/Sex | Clinical characteristics |
|---|---|---|---|---|---|---|
| 1 | N | P (30.23) | P (35.09) | GII.4 | 12 mo/M | AGE |
| 2 | N | P (22.76) | P (24.36) | GII.4 | 24 mo/M | AGE |
| 3 | N | P (31.29) | P (25.89) | GII.4 | 27 mo/F | AGE |
| 4 | N | P (33.75) | P (33.04) | GII | 3 mo/M | AGE |
| 5 | N | P (33.09) | P (34.63) | GII.4 | 11 mo/F | AGE |
| 6 | N | P (33.75) | N (37.02) | GII.4 | 3 d/M | Fever |
| 7 | N | P (31.06) | P (22.51) | GII.12 | 6 y/M | AGE |
| 8 | N | P (33.52) | P (29.05) | GII.4 | 74 y/M | AGE |
| 9 | N | P (33.34) | P (15.31) | GII | 8 y/M | AGE |
Abbreviations: ICG, immunochromatography; Ct, threshold cycle; P, Positive; N, negative; G2, norovirus genogroup II; M, male; F, female; AGE, acute gastroenteritis.
A kit is RIDA GENE Norovirus V assay and B kit is AccuPower Norovirus Real-time RT-PCR assay.
Fig. 1Correlation of rapid immunochromatography test results with real time PCR results.
Abbreviation: Ct, threshold cycle. The specimens showing discrepant results among the rapid test and real-time PCR assay are presented as “x”.
Positive rates obtained in the repeatability/reproducibility test performed by immunochromatography (ICG) assay.
| Real-time PCR (copies/mL) | ICG (Lot 1: 189001) ( | ICG (Lot 2: 189002) ( | ICG (Lot 3: 189003) ( | Total ( | |
|---|---|---|---|---|---|
| Pooled fecal suspension (1:80 dilution) | Positive (2.08 × 107) | 100% | 100% | 100% | 100% |
| Pooled fecal suspension (1:160 dilution) | Positive (1.25 × 107) | 100% | 100% | 100% | 100% |
| Pooled fecal suspension (1:320 dilution) | Positive (4.48 × 106) | 86.7% | 100% | 100% | 95.6% |
| Pooled fecal suspension (1:640 dilution) | Positive (2.45 × 106) | 0% | 0% | 6.7% | 2.2% |
| Pooled fecal suspension (1:1280 dilution) | Positive (1.09 × 106) | 0% | 0% | 0% | 0% |
| Pooled fecal suspension (Negative sample) | Negative | 0% | 0% | 0% | 0% |