Literature DB >> 22959149

Computational multiscale modeling of embryo development.

Pawel Krupinski1, Vijay Chickarmane, Carsten Peterson.   

Abstract

Recent advances in live imaging and genetics of mammalian development which integrate observations of biochemical activity, cell-cell signaling and mechanical interactions between cells pave the way for predictive mathematical multi-scale modeling. In early mammalian embryo development, two of the most critical events which lead to tissue patterning involve changes in gene expression as well as mechanical interactions between cells. We discuss the relevance of mathematical modeling of multi-cellular systems and in particular in simulating these patterns and describe some of the technical challenges one encounters. Many of these issues are not unique for the embryonic system but are shared by other multi-cellular modeling areas.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22959149     DOI: 10.1016/j.gde.2012.08.006

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  6 in total

Review 1.  A close look at the mammalian blastocyst: epiblast and primitive endoderm formation.

Authors:  Jérôme Artus; Claire Chazaud
Journal:  Cell Mol Life Sci       Date:  2014-05-04       Impact factor: 9.261

2.  Quantitative multivariate analysis of dynamic multicellular morphogenic trajectories.

Authors:  Douglas E White; Jonathan B Sylvester; Thomas J Levario; Hang Lu; J Todd Streelman; Todd C McDevitt; Melissa L Kemp
Journal:  Integr Biol (Camb)       Date:  2015-07       Impact factor: 2.192

3.  Multi-scale Dynamical Modeling of T Cell Development from an Early Thymic Progenitor State to Lineage Commitment.

Authors:  Victor Olariu; Mary A Yui; Pawel Krupinski; Wen Zhou; Julia Deichmann; Emil Andersson; Ellen V Rothenberg; Carsten Peterson
Journal:  Cell Rep       Date:  2021-01-12       Impact factor: 9.423

4.  Four simple rules that are sufficient to generate the mammalian blastocyst.

Authors:  Silas Boye Nissen; Marta Perera; Javier Martin Gonzalez; Sophie M Morgani; Mogens H Jensen; Kim Sneppen; Joshua M Brickman; Ala Trusina
Journal:  PLoS Biol       Date:  2017-07-12       Impact factor: 8.029

Review 5.  Kinetic models of hematopoietic differentiation.

Authors:  Victor Olariu; Carsten Peterson
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2018-04-16

Review 6.  Towards understanding the roles of position and geometry on cell fate decisions during preimplantation development.

Authors:  John S Biggins; Christophe Royer; Tomoko Watanabe; Shankar Srinivas
Journal:  Semin Cell Dev Biol       Date:  2015-09-05       Impact factor: 7.727

  6 in total

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