Literature DB >> 22951960

Phosphopeptide characterization by mass spectrometry using reversed-phase supports for solid-phase β-elimination/Michael addition.

Heinz Nika1, JaeHoon Lee, Ian M Willis, Ruth Hogue Angeletti, David H Hawke.   

Abstract

We have adapted the Ba(2+) ion-catalyzed concurrent Michael addition reaction to solid-phase derivatization on ZipTip(C18) pipette tips using 2-aminoethanethiol as a nucleophile. This approach provides several advantages over the classical in-solution-based techniques, including ease of operation, completeness of reaction, improved throughput, efficient use of dilute samples, and amenability to automation. Phosphoseryl and phosphothreonyl peptides, as well as phosphoserine peptides with adjoining prolines, were used to optimize the reaction conditions, which proved highly compatible with the integrity of the samples. The analyte was recovered from the silica-based C18 resin at minimal sample loss. The use of the protocol for improved phosphopeptide detection by signal enhancement was demonstrated with low-level amounts of proteolytic digests from model proteins and experimental samples, an effect found especially prominent with multiple phosphorylated species. The reaction products proved highly suitable for structural characterization by collisionally induced dissociation (CID), and the resultant increased spectral information content, greatly facilitating mapping of the site of phosphorylation. In select cases, the method enables phosphorylation site localization within known protein sequences on the basis of single-stage data alone. The solid-phase strategy presented here provides a simple, versatile, and efficient tool for phosphopeptide structural characterization equipment readily available in most biological laboratories.

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Year:  2012        PMID: 22951960      PMCID: PMC3324170          DOI: 10.7171/jbt.2012-2302-002

Source DB:  PubMed          Journal:  J Biomol Tech        ISSN: 1524-0215


  37 in total

1.  The role of the phosphate group for the structure of phosphopeptide products of adenosine 3',5'-cyclic monophosphate-dependent protein kinase.

Authors:  R C Hider; U Ragnarsson; O Zetterqvist
Journal:  Biochem J       Date:  1985-07-15       Impact factor: 3.857

2.  Improvement of in-gel digestion protocol for peptide mass fingerprinting by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  H Katayama; T Nagasu; Y Oda
Journal:  Rapid Commun Mass Spectrom       Date:  2001       Impact factor: 2.419

3.  Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1.

Authors:  Robyn D Moir; JaeHoon Lee; Rebecca A Haeusler; Neelam Desai; David R Engelke; Ian M Willis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-27       Impact factor: 11.205

4.  Accelerated on-column lysine derivatization and cysteine methylation by imidazole reaction in a deuterated environment for enhanced product ion analysis.

Authors:  Mario Cindrić; Tina Cepo; Ana Skrlin; Marko Vuletić; Laura Bindila
Journal:  Rapid Commun Mass Spectrom       Date:  2006       Impact factor: 2.419

5.  Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.

Authors:  An Chi; Curtis Huttenhower; Lewis Y Geer; Joshua J Coon; John E P Syka; Dina L Bai; Jeffrey Shabanowitz; Daniel J Burke; Olga G Troyanskaya; Donald F Hunt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-07       Impact factor: 11.205

6.  Elimination and sulfite addition as a means of localization and identification of substituted seryl and threonyl residues in proteins and proteoglycans.

Authors:  D L Simpson; J Hranisavljevic; E A Davidson
Journal:  Biochemistry       Date:  1972-05-09       Impact factor: 3.162

7.  An approach to locate phosphorylation sites in a phosphoprotein: mass mapping by combining specific enzymatic degradation with matrix-assisted laser desorption/ionization mass spectrometry.

Authors:  P C Liao; J Leykam; P C Andrews; D A Gage; J Allison
Journal:  Anal Biochem       Date:  1994-05-15       Impact factor: 3.365

8.  Phosphorylation of both serine residues in cardiac troponin I is required to decrease the Ca2+ affinity of cardiac troponin C.

Authors:  R Zhang; J Zhao; J D Potter
Journal:  J Biol Chem       Date:  1995-12-22       Impact factor: 5.157

9.  Characterization of protein kinase A phosphorylation: multi-technique approach to phosphate mapping.

Authors:  Jianwei Shen; Richard A Smith; Vincent S Stoll; Rohinton Edalji; Clarissa Jakob; Karl Walter; Emily Gramling; Sally Dorwin; Diane Bartley; Angelo Gunasekera; Jianguo Yang; Thomas Holzman; Robert W Johnson
Journal:  Anal Biochem       Date:  2004-01-15       Impact factor: 3.365

10.  Rapid and selective modification of phosphoserine residues catalysed by Ba2+ ions for their detection during peptide microsequencing.

Authors:  M F Byford
Journal:  Biochem J       Date:  1991-11-15       Impact factor: 3.857

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  9 in total

1.  N-terminal protein characterization by mass spectrometry after cyanogen bromide cleavage using combined microscale liquid- and solid-phase derivatization.

Authors:  Heinz Nika; David H Hawke; Ruth Hogue Angeletti
Journal:  J Biomol Tech       Date:  2014-04

2.  C-terminal protein characterization by mass spectrometry: isolation of C-terminal fragments from cyanogen bromide-cleaved protein.

Authors:  Heinz Nika; David H Hawke; Ruth Hogue Angeletti
Journal:  J Biomol Tech       Date:  2014-04

Review 3.  Recent advances in enrichment and separation strategies for mass spectrometry-based phosphoproteomics.

Authors:  Chenxi Yang; Xuefei Zhong; Lingjun Li
Journal:  Electrophoresis       Date:  2014-06-16       Impact factor: 3.535

4.  Phosphopeptide enrichment by covalent chromatography after derivatization of protein digests immobilized on reversed-phase supports.

Authors:  Heinz Nika; Edward Nieves; David H Hawke; Ruth Hogue Angeletti
Journal:  J Biomol Tech       Date:  2013-09

5.  Optimization of the β-elimination/michael addition chemistry on reversed-phase supports for mass spectrometry analysis of O-linked protein modifications.

Authors:  Heinz Nika; Edward Nieves; David H Hawke; Ruth Hogue Angeletti
Journal:  J Biomol Tech       Date:  2013-09

6.  Recovery of RNA polymerase III transcription from the glycerol-repressed state: revisiting the role of protein kinase CK2 in Maf1 phosphoregulation.

Authors:  Robyn D Moir; Jaehoon Lee; Ian M Willis
Journal:  J Biol Chem       Date:  2012-07-18       Impact factor: 5.157

7.  N-terminal protein characterization by mass spectrometry using combined microscale liquid and solid-phase derivatization.

Authors:  Heinz Nika; Ruth Hogue Angeletti; David H Hawke
Journal:  J Biomol Tech       Date:  2014-09

8.  C-terminal protein characterization by mass spectrometry using combined micro scale liquid and solid-phase derivatization.

Authors:  Heinz Nika; Edward Nieves; David H Hawke; Ruth Hogue Angeletti
Journal:  J Biomol Tech       Date:  2013-04

Review 9.  Regulation of pol III transcription by nutrient and stress signaling pathways.

Authors:  Robyn D Moir; Ian M Willis
Journal:  Biochim Biophys Acta       Date:  2012-11-16
  9 in total

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