Literature DB >> 22949207

Crystallization and preliminary X-ray characterization of the Vitis vinifera fucokinase:GDP-fucose pyrophosphorylase.

Stephen Quirk1.   

Abstract

The Vitis vinifera dual-activity fucose and nucleotide-sugar metabolizing enzyme L-fucokinase:GDP-fucose pyrophosphorylase (FKP) has been purified to homogeneity and the 118.8 kDa monomeric protein has been crystallized by vapor diffusion in Zeppezauer tubes at 277 K. Crystals of the apoenzyme diffracted to 2.6 Å resolution and belonged to the tetragonal space group P4(1)2(1)2. There is a single FKP monomer in the asymmetric unit, giving a Matthews coefficient of 3.22 Å(3) Da(-1) and a solvent content of 61.8%. A complete native data set has been collected as a first step in determining the three-dimensional structure of this enzyme.

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Year:  2012        PMID: 22949207      PMCID: PMC3433210          DOI: 10.1107/S1744309112033155

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

1.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

Review 2.  Physical aspects of protein crystal growth investigated with the Advanced Protein Crystallization Facility in reduced-gravity environments.

Authors:  Alessandro Vergara; Bernard Lorber; Adriana Zagari; Richard Giegé
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-12-19

3.  Role and regulation of sigma S in general resistance conferred by low-shear simulated microgravity in Escherichia coli.

Authors:  S V Lynch; E L Brodie; A Matin
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

Review 4.  Extracting trends from two decades of microgravity macromolecular crystallization history.

Authors:  Russell A Judge; Edward H Snell; Mark J van der Woerd
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-05-26

5.  Micro diffusion cells for the growth of single protein crystals by means of equilibrium dialysis.

Authors:  M Zeppezauer; H Eklund; E S Zeppezauer
Journal:  Arch Biochem Biophys       Date:  1968-08       Impact factor: 4.013

6.  GDP-L-fucose pyrophosphorylase. Purification, cDNA cloning, and properties of the enzyme.

Authors:  I Pastuszak; C Ketchum; G Hermanson; E J Sjoberg; R Drake; A D Elbein
Journal:  J Biol Chem       Date:  1998-11-13       Impact factor: 5.157

7.  A bifunctional enzyme with L-fucokinase and GDP-L-fucose pyrophosphorylase activities salvages free L-fucose in Arabidopsis.

Authors:  Toshihisa Kotake; Sachiko Hojo; Noriaki Tajima; Koji Matsuoka; Tetsuo Koyama; Yoichi Tsumuraya
Journal:  J Biol Chem       Date:  2008-01-16       Impact factor: 5.157

8.  Equilibration of fucosyl glycoprotein pools in HeLa cells.

Authors:  P D Yurchenco; P H Atkinson
Journal:  Biochemistry       Date:  1977-03-08       Impact factor: 3.162

Review 9.  Fucose: biosynthesis and biological function in mammals.

Authors:  Daniel J Becker; John B Lowe
Journal:  Glycobiology       Date:  2003-03-19       Impact factor: 4.313

10.  Study of the conversion of GDP-mannose into GDP-fucose in Nereids: a biochemical marker of oocyte maturation.

Authors:  P Bulet; B Hoflack; M Porchet; A Verbert
Journal:  Eur J Biochem       Date:  1984-10-15
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