Literature DB >> 22947515

G-quadruplex DNA aptamers for zeatin recognizing.

Cui Qi1, Tao Bing, Hongcheng Mei, Xiaojuan Yang, Xiangjun Liu, Dihua Shangguan.   

Abstract

Zeatins, a major type of cytokinin, are ubiquitous in higher plants, and involve in regulating a wide range of developmental processes. The development of highly specific ligands to zeatins would be very useful in plant biological research. Here we describe a group of oligonucleotide ligands (aptamers) generated against trans-zeatin. The optimized aptamers possess strong affinity to trans-zeatin and trans-zeatin riboside (Kd=3-5 μM), and relatively weak affinity (Kd=27-30 μM) to cis-zeatin and dihydrozeatin. These aptamers adopt a hairpin-G-quadruplex structure for binding to zeatin. A fluorescence turn-on aptasensor based on graphene oxide (GO) was developed for the recognition of zeatins. The specificity assay of this aptasensor shows good response to zeatins, and no response to the adenine derivatives (analog of zeatins) abundantly existing in biological samples. These results show the great potential of these aptamers in chemical analysis and biological investigation of zeatins.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22947515     DOI: 10.1016/j.bios.2012.08.004

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  7 in total

Review 1.  Graphene/aptamer probes for small molecule detection: from in vitro test to in situ imaging.

Authors:  Yi Dong; Ting Zhang; Xiaoya Lin; Jiangtao Feng; Fang Luo; Hong Gao; Yangping Wu; Ruijie Deng; Qiang He
Journal:  Mikrochim Acta       Date:  2020-02-19       Impact factor: 5.833

2.  Triplex-quadruplex structural scaffold: a new binding structure of aptamer.

Authors:  Tao Bing; Wei Zheng; Xin Zhang; Luyao Shen; Xiangjun Liu; Fuyi Wang; Jie Cui; Zehui Cao; Dihua Shangguan
Journal:  Sci Rep       Date:  2017-11-13       Impact factor: 4.379

3.  Selection and Characterization of Vimentin-Binding Aptamer Motifs for Ovarian Cancer.

Authors:  Andrea M Costello; Miguel-Angel Elizondo-Riojas; Xin Li; David E Volk; Anil K Pillai; Hongyu Wang
Journal:  Molecules       Date:  2021-10-28       Impact factor: 4.411

4.  Selection and identification of high-affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection.

Authors:  Yunxiang Bao; Dengzhao Zhu; Yang Zhao; Xinzhu Li; Chunmei Gu; Hansong Yu
Journal:  Food Sci Nutr       Date:  2022-01-19       Impact factor: 2.863

Review 5.  Generating Cell Targeting Aptamers for Nanotheranostics Using Cell-SELEX.

Authors:  Yifan Lyu; Guang Chen; Dihua Shangguan; Liqin Zhang; Shuo Wan; Yuan Wu; Hui Zhang; Lian Duan; Chao Liu; Mingxu You; Jie Wang; Weihong Tan
Journal:  Theranostics       Date:  2016-06-15       Impact factor: 11.556

6.  Oxidative degradation of polyamines by serum supplement causes cytotoxicity on cultured cells.

Authors:  Linlin Wang; Ying Liu; Cui Qi; Luyao Shen; Junyan Wang; Xiangjun Liu; Nan Zhang; Tao Bing; Dihua Shangguan
Journal:  Sci Rep       Date:  2018-07-10       Impact factor: 4.379

7.  Aptamer-Based Colorimetric Probe for trans-Zeatin Detection Using Unmodified Gold Nanoparticle.

Authors:  Ping Sun; Xiwei Zhang; Xianxiang Wang
Journal:  Int J Anal Chem       Date:  2020-10-26       Impact factor: 1.885

  7 in total

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