Literature DB >> 22945576

Recent trends in statistical QSAR modeling of environmental chemical toxicity.

Alexander Tropsha1.   

Abstract

Quantitative cheminformatics approaches such as QSAR modeling find growing applications in chemical risk assessment. Traditional methods rely on the use of calculated chemical descriptors of molecules and relatively small training sets. However, in recent years, there is a trend toward the increased use of in vitro biological testing approaches to reduce both the length of experimental studies and the animal use for chemical risk assessment. Furthermore, there is also much greater emphasis on model validation using external datasets to enable the reliable use of computational models as part of regulatory decision making. In this chapter, recent trends emphasizing the need for both careful curation of experimental data prior to model development and rigorous model validation are investigated. Furthermore, recent approaches to chemical toxicity prediction that employ both chemical descriptors and in vitro screening data for developing novel hybrid chemical/biological models are being reviewed. Examples of respective application studies that employ novel workflows for model developments are described and recent important efforts by several academic, nonprofit, and industrial groups to start placing both data and, especially, models in the public domain are discussed.

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Year:  2012        PMID: 22945576     DOI: 10.1007/978-3-7643-8340-4_13

Source DB:  PubMed          Journal:  Exp Suppl        ISSN: 1664-431X


  3 in total

1.  Mechanism-Driven Read-Across of Chemical Hepatotoxicants Based on Chemical Structures and Biological Data.

Authors:  Linlin Zhao; Daniel P Russo; Wenyi Wang; Lauren M Aleksunes; Hao Zhu
Journal:  Toxicol Sci       Date:  2020-04-01       Impact factor: 4.849

2.  Perceiving the Concealed and Unreported Pharmacophoric Features of the 5-Hydroxytryptamine Receptor Using Balanced QSAR Analysis.

Authors:  Syed Nasir Abbas Bukhari; Mervat Abdelaziz Elsherif; Kashaf Junaid; Hasan Ejaz; Pravej Alam; Abdul Samad; Rahul D Jawarkar; Vijay H Masand
Journal:  Pharmaceuticals (Basel)       Date:  2022-07-05

3.  Interrogation of Bacillus anthracis SrtA active site loop forming open/close lid conformations through extensive MD simulations for understanding binding selectivity of SrtA inhibitors.

Authors:  Chandrabose Selvaraj; Gurudeeban Selvaraj; Randa Mohamed Ismail; Rajendran Vijayakumar; Alaa Baazeem; Dong-Qing Wei; Sanjeev Kumar Singh
Journal:  Saudi J Biol Sci       Date:  2021-05-08       Impact factor: 4.219

  3 in total

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