Literature DB >> 22944673

Protein O-glycosylation analysis.

Gerhild Zauner1, Radoslaw P Kozak, Richard A Gardner, Daryl L Fernandes, André M Deelder, Manfred Wuhrer.   

Abstract

This review provides an overview on the methods available for analysis of O-glycosylation. Three major themes are addressed: analysis of released O-glycans including different O-glycan liberation, derivatization, and detection methods; analysis of formerly O-glycosylated peptides yielding information on O-glycan attachment sites; analysis of O-glycopeptides, representing by far the most informative but also most challenging approach for O-glycan analysis. Although there are various techniques available for the identification of O-linked oligosaccharides, the focus here is on MS fragmentation techniques such as collision-induced fragmentation, electron capture dissociation, and electron transfer dissociation. Finally, the O-glycan analytical challenges that need to be met will be discussed.

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Year:  2012        PMID: 22944673     DOI: 10.1515/hsz-2012-0144

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  23 in total

Review 1.  Toward a platform for comprehensive glycan sequencing.

Authors:  Vernon Reinhold; Hailong Zhang; Andrew Hanneman; David Ashline
Journal:  Mol Cell Proteomics       Date:  2013-02-25       Impact factor: 5.911

Review 2.  Analysis of Mammalian O-Glycopeptides-We Have Made a Good Start, but There is a Long Way to Go.

Authors:  Zsuzsanna Darula; Katalin F Medzihradszky
Journal:  Mol Cell Proteomics       Date:  2017-11-21       Impact factor: 5.911

Review 3.  Liquid chromatography-tandem mass spectrometry-based fragmentation analysis of glycopeptides.

Authors:  Jonas Nilsson
Journal:  Glycoconj J       Date:  2016-01-18       Impact factor: 2.916

4.  Characterizing O-linked glycopeptides by electron transfer dissociation: fragmentation rules and applications in data analysis.

Authors:  Zhikai Zhu; Xiaomeng Su; Daniel F Clark; Eden P Go; Heather Desaire
Journal:  Anal Chem       Date:  2013-08-22       Impact factor: 6.986

Review 5.  Targeted methods for quantitative analysis of protein glycosylation.

Authors:  Radoslav Goldman; Miloslav Sanda
Journal:  Proteomics Clin Appl       Date:  2015-01-19       Impact factor: 3.494

6.  Characterizing sialic acid variants at the glycopeptide level.

Authors:  Katalin F Medzihradszky; Krista Kaasik; Robert J Chalkley
Journal:  Anal Chem       Date:  2015-02-17       Impact factor: 6.986

Review 7.  Mass Spectrometry-Based Techniques to Elucidate the Sugar Code.

Authors:  Márkó Grabarics; Maike Lettow; Carla Kirschbaum; Kim Greis; Christian Manz; Kevin Pagel
Journal:  Chem Rev       Date:  2021-09-07       Impact factor: 72.087

8.  Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology.

Authors:  Catharina Steentoft; Sergey Y Vakhrushev; Hiren J Joshi; Yun Kong; Malene B Vester-Christensen; Katrine T-B G Schjoldager; Kirstine Lavrsen; Sally Dabelsteen; Nis B Pedersen; Lara Marcos-Silva; Ramneek Gupta; Eric Paul Bennett; Ulla Mandel; Søren Brunak; Hans H Wandall; Steven B Levery; Henrik Clausen
Journal:  EMBO J       Date:  2013-04-12       Impact factor: 11.598

9.  LC-MS3 quantification of O-glycopeptides in human serum.

Authors:  Miloslav Sanda; Petr Pompach; Julius Benicky; Radoslav Goldman
Journal:  Electrophoresis       Date:  2013-07-24       Impact factor: 3.535

10.  Glycan side reaction may compromise ETD-based glycopeptide identification.

Authors:  Zsuzsanna Darula; Katalin F Medzihradszky
Journal:  J Am Soc Mass Spectrom       Date:  2014-03-25       Impact factor: 3.109

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