Literature DB >> 22942012

iBRAIN2: automated analysis and data handling for RNAi screens.

Vincent Rouilly1, Eva Pujadas, Béla Hullár, Csaba Balázs, Peter Kunszt, Michael Podvinec.   

Abstract

We report on the implementation of a software suite dedicated to the management and analysis of large scale RNAi High Content Screening (HCS). We describe the requirements identified amongst our different users, the supported data flow, and the implemented software. Our system is already supporting productively three different laboratories operating in distinct IT infrastructures. The system was already used to analyze hundreds of RNAi HCS plates.

Mesh：

Year:  2012        PMID： 22942012

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN： 0926-9630


  2 in total

1.  Simultaneous analysis of large-scale RNAi screens for pathogen entry.

Authors:  Pauli Rämö; Anna Drewek; Cécile Arrieumerlou; Niko Beerenwinkel; Houchaima Ben-Tekaya; Bettina Cardel; Alain Casanova; Raquel Conde-Alvarez; Pascale Cossart; Gábor Csúcs; Simone Eicher; Mario Emmenlauer; Urs Greber; Wolf-Dietrich Hardt; Ari Helenius; Christoph Kasper; Andreas Kaufmann; Saskia Kreibich; Andreas Kühbacher; Peter Kunszt; Shyan Huey Low; Jason Mercer; Daria Mudrak; Simone Muntwiler; Lucas Pelkmans; Javier Pizarro-Cerdá; Michael Podvinec; Eva Pujadas; Bernd Rinn; Vincent Rouilly; Fabian Schmich; Juliane Siebourg-Polster; Berend Snijder; Michael Stebler; Gabriel Studer; Ewa Szczurek; Matthias Truttmann; Christian von Mering; Andreas Vonderheit; Artur Yakimovich; Peter Bühlmann; Christoph Dehio
Journal:  BMC Genomics       Date:  2014-12-22       Impact factor: 3.969

2.  Anima: modular workflow system for comprehensive image data analysis.

Authors:  Ville Rantanen; Miko Valori; Sampsa Hautaniemi
Journal:  Front Bioeng Biotechnol       Date:  2014-07-30
  2 in total

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