Literature DB >> 22941077

Proteorhodopsin-like genes present in thermoacidophilic high-mountain microbial communities.

Laura C Bohorquez1, Carlos A Ruiz-Pérez, María Mercedes Zambrano.   

Abstract

Proteorhodopsin (PR) sequences were PCR amplified from three Andean acidic hot spring samples. These sequences were similar to freshwater and marine PRs and they contained residues indicative of proton-pumping activity and of proteins that absorb green light; these findings suggest that PRs might contribute to cellular metabolism in these habitats.

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Year:  2012        PMID： 22941077      PMCID： PMC3485705          DOI： 10.1128/AEM.01683-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  22 in total

1.  Proteorhodopsin phototrophy in the ocean.

Authors:  O Béjà; E N Spudich; J L Spudich; M Leclerc; E F DeLong
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

2.  The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin.

Authors:  Ulrich Stingl; Russell A Desiderio; Jang-Cheon Cho; Kevin L Vergin; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2007-02-09       Impact factor: 4.792

3.  Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host.

Authors:  A Martinez; A S Bradley; J R Waldbauer; R E Summons; E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

4.  Cloning of complete genes for novel hydrolytic enzymes from Antarctic sea water bacteria by use of an improved genome walking technique.

Authors:  Juan Pablo Acevedo; Fernando Reyes; Loreto P Parra; Oriana Salazar; Barbara A Andrews; Juan A Asenjo
Journal:  J Biotechnol       Date:  2007-12-04       Impact factor: 3.307

5.  Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas.

Authors:  Gazalah Sabehi; Benjamin C Kirkup; Mira Rozenberg; Noga Stambler; Martin F Polz; Oded Béjà
Journal:  ISME J       Date:  2007-05       Impact factor: 10.302

6.  Actinorhodopsins: proteorhodopsin-like gene sequences found predominantly in non-marine environments.

Authors:  Adrian K Sharma; Olga Zhaxybayeva; R Thane Papke; W Ford Doolittle
Journal:  Environ Microbiol       Date:  2008-01-24       Impact factor: 5.491

7.  Light stimulates growth of proteorhodopsin-containing marine Flavobacteria.

Authors:  Laura Gómez-Consarnau; José M González; Montserrat Coll-Lladó; Pontus Gourdon; Torbjörn Pascher; Richard Neutze; Carlos Pedrós-Alió; Jarone Pinhassi
Journal:  Nature       Date:  2007-01-11       Impact factor: 49.962

8.  Abundant proteorhodopsin genes in the North Atlantic Ocean.

Authors:  Barbara J Campbell; Lisa A Waidner; Matthew T Cottrell; David L Kirchman
Journal:  Environ Microbiol       Date:  2008-01       Impact factor: 5.491

9.  New insights into metabolic properties of marine bacteria encoding proteorhodopsins.

Authors:  Gazalah Sabehi; Alexander Loy; Kwang-Hwan Jung; Ranga Partha; John L Spudich; Tal Isaacson; Joseph Hirschberg; Michael Wagner; Oded Béjà
Journal:  PLoS Biol       Date:  2005-07-19       Impact factor: 8.029

10.  The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific.

Authors:  Douglas B Rusch; Aaron L Halpern; Granger Sutton; Karla B Heidelberg; Shannon Williamson; Shibu Yooseph; Dongying Wu; Jonathan A Eisen; Jeff M Hoffman; Karin Remington; Karen Beeson; Bao Tran; Hamilton Smith; Holly Baden-Tillson; Clare Stewart; Joyce Thorpe; Jason Freeman; Cynthia Andrews-Pfannkoch; Joseph E Venter; Kelvin Li; Saul Kravitz; John F Heidelberg; Terry Utterback; Yu-Hui Rogers; Luisa I Falcón; Valeria Souza; Germán Bonilla-Rosso; Luis E Eguiarte; David M Karl; Shubha Sathyendranath; Trevor Platt; Eldredge Bermingham; Victor Gallardo; Giselle Tamayo-Castillo; Michael R Ferrari; Robert L Strausberg; Kenneth Nealson; Robert Friedman; Marvin Frazier; J Craig Venter
Journal:  PLoS Biol       Date:  2007-03       Impact factor: 8.029
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  4 in total

Review 1.  Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology.

Authors:  Jarone Pinhassi; Edward F DeLong; Oded Béjà; José M González; Carlos Pedrós-Alió
Journal:  Microbiol Mol Biol Rev       Date:  2016-09-14       Impact factor: 11.056

2.  Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake.

Authors:  Marta F Gorriti; Graciela M Dias; Luciane A Chimetto; Amaro E Trindade-Silva; Bruno S Silva; Milene M A Mesquita; Gustavo B Gregoracci; Maria E Farias; Cristiane C Thompson; Fabiano L Thompson
Journal:  BMC Genomics       Date:  2014-06-13       Impact factor: 3.969

3.  Diversity of Aerobic Anoxygenic Phototrophs and Rhodopsin-Containing Bacteria in the Surface Microlayer, Water Column and Epilithic Biofilms of Lake Baikal.

Authors:  Agnia Dmitrievna Galachyants; Andrey Yurjevich Krasnopeev; Galina Vladimirovna Podlesnaya; Sergey Anatoljevich Potapov; Elena Viktorovna Sukhanova; Irina Vasiljevna Tikhonova; Ekaterina Andreevna Zimens; Marsel Rasimovich Kabilov; Natalia Albertovna Zhuchenko; Anna Sergeevna Gorshkova; Maria Yurjevna Suslova; Olga Ivanovna Belykh
Journal:  Microorganisms       Date:  2021-04-14

4.  Functional Green-Tuned Proteorhodopsin from Modern Stromatolites.

Authors:  Virginia Helena Albarracín; Ivana Kraiselburd; Christian Bamann; Phillip G Wood; Ernst Bamberg; María Eugenia Farias; Wolfgang Gärtner
Journal:  PLoS One       Date:  2016-05-17       Impact factor: 3.240
  4 in total

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