Literature DB >> 22936167

Evaluating protein interactions through cross-linking mass spectrometry.

David L Tabb.   

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Year:  2012        PMID： 22936167      PMCID： PMC3730130          DOI： 10.1038/nmeth.2139

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  7 in total

1.  A modular cross-linking approach for exploring protein interactions.

Authors:  Michelle Trester-Zedlitz; Katsuhiko Kamada; Stephen K Burley; David Fenyö; Brian T Chait; Tom W Muir
Journal:  J Am Chem Soc       Date:  2003-03-05       Impact factor: 15.419

2.  False discovery rate estimation for cross-linked peptides identified by mass spectrometry.

Authors:  Thomas Walzthoeni; Manfred Claassen; Alexander Leitner; Franz Herzog; Stefan Bohn; Friedrich Förster; Martin Beck; Ruedi Aebersold
Journal:  Nat Methods       Date:  2012-07-08       Impact factor: 28.547

3.  Identification of cross-linked peptides from complex samples.

Authors:  Bing Yang; Yan-Jie Wu; Ming Zhu; Sheng-Bo Fan; Jinzhong Lin; Kun Zhang; Shuang Li; Hao Chi; Yu-Xin Li; Hai-Feng Chen; Shu-Kun Luo; Yue-He Ding; Le-Heng Wang; Zhiqi Hao; Li-Yun Xiu; She Chen; Keqiong Ye; Si-Min He; Meng-Qiu Dong
Journal:  Nat Methods       Date:  2012-07-08       Impact factor: 28.547

4.  Peptide identification from mixture tandem mass spectra.

Authors:  Jian Wang; Josué Pérez-Santiago; Jonathan E Katz; Parag Mallick; Nuno Bandeira
Journal:  Mol Cell Proteomics       Date:  2010-03-27       Impact factor: 5.911

5.  pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry.

Authors:  Dequan Li; Yan Fu; Ruixiang Sun; Charles X Ling; Yonggang Wei; Hu Zhou; Rong Zeng; Qiang Yang; Simin He; Wen Gao
Journal:  Bioinformatics       Date:  2005-04-07       Impact factor: 6.937

6.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

Review 7.  Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics.

Authors:  Alexander Leitner; Thomas Walzthoeni; Abdullah Kahraman; Franz Herzog; Oliver Rinner; Martin Beck; Ruedi Aebersold
Journal:  Mol Cell Proteomics       Date:  2010-03-31       Impact factor: 5.911
  7 in total
  5 in total

1.  MS-based cross-linking analysis reveals the location of the PsbQ protein in cyanobacterial photosystem II.

Authors:  Haijun Liu; Hao Zhang; Daniel A Weisz; Ilan Vidavsky; Michael L Gross; Himadri B Pakrasi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

2.  Characterization of the Raptor/4E-BP1 interaction by chemical cross-linking coupled with mass spectrometry analysis.

Authors:  Kimberly Coffman; Bing Yang; Jie Lu; Ashley L Tetlow; Emelia Pelliccio; Shan Lu; Da-Chuan Guo; Chun Tang; Meng-Qiu Dong; Fuyuhiko Tamanoi
Journal:  J Biol Chem       Date:  2014-01-08       Impact factor: 5.157

3.  Dramatic Domain Rearrangements of the Cyanobacterial Orange Carotenoid Protein upon Photoactivation.

Authors:  Haijun Liu; Hao Zhang; Gregory S Orf; Yue Lu; Jing Jiang; Jeremy D King; Nathan R Wolf; Michael L Gross; Robert E Blankenship
Journal:  Biochemistry       Date:  2016-02-09       Impact factor: 3.162

4.  A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides.

Authors:  Zhen-Lin Chen; Jia-Ming Meng; Yong Cao; Ji-Li Yin; Run-Qian Fang; Sheng-Bo Fan; Chao Liu; Wen-Feng Zeng; Yue-He Ding; Dan Tan; Long Wu; Wen-Jing Zhou; Hao Chi; Rui-Xiang Sun; Meng-Qiu Dong; Si-Min He
Journal:  Nat Commun       Date:  2019-07-30       Impact factor: 14.919

Review 5.  Proteomic insights into synaptic signaling in the brain: the past, present and future.

Authors:  Yalan Xu; Xiuyue Song; Dong Wang; Yin Wang; Peifeng Li; Jing Li
Journal:  Mol Brain       Date:  2021-02-17       Impact factor: 4.041
  5 in total

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