Literature DB >> 22933771

Draft genome sequence of Escherichia coli W26, an enteric strain isolated from cow feces.

Mincheol Kim1, Hana Yi, Yong-Joon Cho, Jeonghwan Jang, Hor-Gil Hur, Jongsik Chun.   

Abstract

An enteric bacterium, Escherichia coli W26 (KACC 16630), was isolated from feces from a healthy cow in South Korea. Here, we report the draft genome sequence of the isolate, which is closely affiliated with commensal strains belonging to E. coli phylogroup B1.

Entities:  

Mesh：

Substances：

Year:  2012        PMID： 22933771      PMCID： PMC3430335          DOI： 10.1128/JB.01180-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species.

Authors:  Ok-Sun Kim; Yong-Joon Cho; Kihyun Lee; Seok-Hwan Yoon; Mincheol Kim; Hyunsoo Na; Sang-Cheol Park; Yoon Seong Jeon; Jae-Hak Lee; Hana Yi; Sungho Won; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2011-11-25       Impact factor: 2.747

2.  DNA-DNA hybridization values and their relationship to whole-genome sequence similarities.

Authors:  Johan Goris; Konstantinos T Konstantinidis; Joel A Klappenbach; Tom Coenye; Peter Vandamme; James M Tiedje
Journal:  Int J Syst Evol Microbiol       Date:  2007-01       Impact factor: 2.747

3.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

Review 4.  A genomic perspective on protein families.

Authors:  R L Tatusov; E V Koonin; D J Lipman
Journal:  Science       Date:  1997-10-24       Impact factor: 47.728

5.  Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species.

Authors:  Chengwei Luo; Seth T Walk; David M Gordon; Michael Feldgarden; James M Tiedje; Konstantinos T Konstantinidis
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

6.  Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies.

Authors:  G M Pupo; D K Karaolis; R Lan; P R Reeves
Journal:  Infect Immun       Date:  1997-07       Impact factor: 3.441

7.  Phylogenetic analysis of Escherichia coli strains causing neonatal meningitis suggests horizontal gene transfer from a predominant pool of highly virulent B2 group strains.

Authors:  E Bingen; B Picard; N Brahimi; S Mathy; P Desjardins; J Elion; E Denamur
Journal:  J Infect Dis       Date:  1998-03       Impact factor: 5.226

8.  Accessing the SEED genome databases via Web services API: tools for programmers.

Authors:  Terry Disz; Sajia Akhter; Daniel Cuevas; Robert Olson; Ross Overbeek; Veronika Vonstein; Rick Stevens; Robert A Edwards
Journal:  BMC Bioinformatics       Date:  2010-06-14       Impact factor: 3.169

9.  Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae.

Authors:  Jongsik Chun; Christopher J Grim; Nur A Hasan; Je Hee Lee; Seon Young Choi; Bradd J Haley; Elisa Taviani; Yoon-Seong Jeon; Dong Wook Kim; Jae-Hak Lee; Thomas S Brettin; David C Bruce; Jean F Challacombe; J Chris Detter; Cliff S Han; A Christine Munk; Olga Chertkov; Linda Meincke; Elizabeth Saunders; Ronald A Walters; Anwar Huq; G Balakrish Nair; Rita R Colwell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-31       Impact factor: 11.205

10.  Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.

Authors:  Marie Touchon; Claire Hoede; Olivier Tenaillon; Valérie Barbe; Simon Baeriswyl; Philippe Bidet; Edouard Bingen; Stéphane Bonacorsi; Christiane Bouchier; Odile Bouvet; Alexandra Calteau; Hélène Chiapello; Olivier Clermont; Stéphane Cruveiller; Antoine Danchin; Médéric Diard; Carole Dossat; Meriem El Karoui; Eric Frapy; Louis Garry; Jean Marc Ghigo; Anne Marie Gilles; James Johnson; Chantal Le Bouguénec; Mathilde Lescat; Sophie Mangenot; Vanessa Martinez-Jéhanne; Ivan Matic; Xavier Nassif; Sophie Oztas; Marie Agnès Petit; Christophe Pichon; Zoé Rouy; Claude Saint Ruf; Dominique Schneider; Jérôme Tourret; Benoit Vacherie; David Vallenet; Claudine Médigue; Eduardo P C Rocha; Erick Denamur
Journal:  PLoS Genet       Date:  2009-01-23       Impact factor: 5.917
  10 in total
  1 in total

1.  No evidence for a bovine mastitis Escherichia coli pathotype.

Authors:  Andreas Leimbach; Anja Poehlein; John Vollmers; Dennis Görlich; Rolf Daniel; Ulrich Dobrindt
Journal:  BMC Genomics       Date:  2017-05-08       Impact factor: 3.969
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.