Literature DB >> 22933765

Genome sequence of Ralstonia sp. strain PBA, a bacterium involved in the biodegradation of 4-aminobenzenesulfonate.

Han Ming Gan1, Teong Han Chew, Yea-Ling Tay, Siew Fen Lye, Adibah Yahya.   

Abstract

Ralstonia sp. strain PBA was isolated from textile wastewater in a coculture with Hydrogenophaga sp. strain PBC. Here we present the assembly and annotation of its genome, which may provide further insights into the mechanism of its interaction with strain PBC during 4-aminobenzenesulfonate degradation.

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Year:  2012        PMID： 22933765      PMCID： PMC3430363          DOI： 10.1128/JB.01165-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Biodegradation of 4-aminobenzenesulfonate by Ralstonia sp. PBA and Hydrogenophaga sp. PBC isolated from textile wastewater treatment plant.

Authors:  Han Ming Gan; Shafinaz Shahir; Zaharah Ibrahim; Adibah Yahya
Journal:  Chemosphere       Date:  2010-11-20       Impact factor: 7.086

Review 2.  The beta-ketoadipate pathway and the biology of self-identity.

Authors:  C S Harwood; R E Parales
Journal:  Annu Rev Microbiol       Date:  1996       Impact factor: 15.500

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Cloning and functional analysis of the genes coding for 4-aminobenzenesulfonate 3,4-dioxygenase from Hydrogenophaga sp. PBC.

Authors:  Han Ming Gan; Shafinaz Shahir; Adibah Yahya
Journal:  Microbiology (Reading)       Date:  2012-05-18       Impact factor: 2.777

5.  Genome sequence of the bioplastic-producing "Knallgas" bacterium Ralstonia eutropha H16.

Authors:  Anne Pohlmann; Wolfgang Florian Fricke; Frank Reinecke; Bernhard Kusian; Heiko Liesegang; Rainer Cramm; Thomas Eitinger; Christian Ewering; Markus Pötter; Edward Schwartz; Axel Strittmatter; Ingo Voss; Gerhard Gottschalk; Alexander Steinbüchel; Bärbel Friedrich; Botho Bowien
Journal:  Nat Biotechnol       Date:  2006-09-10       Impact factor: 54.908

6.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

Review 7.  Ralstonia pickettii in environmental biotechnology: potential and applications.

Authors:  M P Ryan; J T Pembroke; C C Adley
Journal:  J Appl Microbiol       Date:  2007-10       Impact factor: 3.772

8.  Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

Authors:  Ana Conesa; Stefan Götz; Juan Miguel García-Gómez; Javier Terol; Manuel Talón; Montserrat Robles
Journal:  Bioinformatics       Date:  2005-08-04       Impact factor: 6.937

9.  Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence.

Authors:  Benoît Remenant; Bénédicte Coupat-Goutaland; Alice Guidot; Gilles Cellier; Emmanuel Wicker; Caitilyn Allen; Mark Fegan; Olivier Pruvost; Mounira Elbaz; Alexandra Calteau; Gregory Salvignol; Damien Mornico; Sophie Mangenot; Valérie Barbe; Claudine Médigue; Philippe Prior
Journal:  BMC Genomics       Date:  2010-06-15       Impact factor: 3.969

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  10 in total
  2 in total

1.  A glimpse into the genetic basis of symbiosis between Hydrogenophaga and their helper strains in the biodegradation of 4-aminobenzenesulfonate.

Authors:  Kangsan Kim; Han Ming Gan
Journal:  J Genomics       Date:  2017-07-10

2.  Nanopore Long-Read Guided Complete Genome Assembly of Hydrogenophaga intermedia, and Genomic Insights into 4-Aminobenzenesulfonate, p-Aminobenzoic Acid and Hydrogen Metabolism in the Genus Hydrogenophaga.

Authors:  Han M Gan; Yin P Lee; Christopher M Austin
Journal:  Front Microbiol       Date:  2017-10-04       Impact factor: 5.640
  2 in total

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