Literature DB >> 22933754

Draft genome sequence of Actinomyces massiliensis strain 4401292T.

Véronique Roux1, Catherine Robert, Grégory Gimenez, Reem Gharbi, Didier Raoult.   

Abstract

A draft genome sequence of Actinomyces massiliensis, an anaerobic bacterium isolated from a patient's blood culture, is described here. CRISPR-associated proteins, insertion sequences, and toxin-antitoxin loci were found on the genome.

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Year:  2012        PMID： 22933754      PMCID： PMC3430310          DOI： 10.1128/JB.01039-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

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Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
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5.  The COG database: a tool for genome-scale analysis of protein functions and evolution.

Authors:  R L Tatusov; M Y Galperin; D A Natale; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

6.  Actinomyces massiliensis sp. nov., isolated from a patient blood culture.

Authors:  Aurélie Renvoise; Didier Raoult; Véronique Roux
Journal:  Int J Syst Evol Microbiol       Date:  2009-03       Impact factor: 2.747

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Journal:  Database (Oxford)       Date:  2011-03-29       Impact factor: 3.451

8.  CharProtDB: a database of experimentally characterized protein annotations.

Authors:  Ramana Madupu; Alexander Richter; Robert J Dodson; Lauren Brinkac; Derek Harkins; Scott Durkin; Susmita Shrivastava; Granger Sutton; Daniel Haft
Journal:  Nucleic Acids Res       Date:  2011-12-02       Impact factor: 16.971

9.  The Pfam protein families database.

Authors:  Marco Punta; Penny C Coggill; Ruth Y Eberhardt; Jaina Mistry; John Tate; Chris Boursnell; Ningze Pang; Kristoffer Forslund; Goran Ceric; Jody Clements; Andreas Heger; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
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1.  Genome sequence and description of Actinomyces polynesiensis str. MS2 sp. nov. isolated from the human gut.

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  1 in total

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