Literature DB >> 22923412

Versatility in corrinoid salvaging and remodeling pathways supports corrinoid-dependent metabolism in Dehalococcoides mccartyi.

Shan Yi1, Erica C Seth, Yu-Jie Men, Sally P Stabler, Robert H Allen, Lisa Alvarez-Cohen, Michiko E Taga.   

Abstract

Corrinoids are cobalt-containing molecules that function as enzyme cofactors in a wide variety of organisms but are produced solely by a subset of prokaryotes. Specific corrinoids are identified by the structure of their axial ligands. The lower axial ligand of a corrinoid can be a benzimidazole, purine, or phenolic compound. Though it is known that many organisms obtain corrinoids from the environment, the variety of corrinoids that can serve as cofactors for any one organism is largely unstudied. Here, we examine the range of corrinoids that function as cofactors for corrinoid-dependent metabolism in Dehalococcoides mccartyi strain 195. Dehalococcoides bacteria play an important role in the bioremediation of chlorinated solvents in the environment because of their unique ability to convert the common groundwater contaminants perchloroethene and trichloroethene to the innocuous end product ethene. All isolated D. mccartyi strains require exogenous corrinoids such as vitamin B(12) for growth. However, like many other corrinoid-dependent bacteria, none of the well-characterized D. mccartyi strains has been shown to be capable of synthesizing corrinoids de novo. In this study, we investigate the ability of D. mccartyi strain 195 to use specific corrinoids, as well as its ability to modify imported corrinoids to a functional form. We show that strain 195 can use only specific corrinoids containing benzimidazole lower ligands but is capable of remodeling other corrinoids by lower ligand replacement when provided a functional benzimidazole base. This study of corrinoid utilization and modification by D. mccartyi provides insight into the array of strategies that microorganisms employ in acquiring essential nutrients from the environment.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22923412      PMCID: PMC3485714          DOI: 10.1128/AEM.02150-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  52 in total

1.  MAMMALIAN METHYLMALONYL ISOMERASE AND VITAMIN B(12) COENZYMES.

Authors:  P Lengyel; R Mazumder; S Ochoa
Journal:  Proc Natl Acad Sci U S A       Date:  1960-10       Impact factor: 11.205

2.  The genome of Rhodobacter sphaeroides strain 2.4.1 encodes functional cobinamide salvaging systems of archaeal and bacterial origins.

Authors:  Michael J Gray; Norbert K Tavares; Jorge C Escalante-Semerena
Journal:  Mol Microbiol       Date:  2008-09-18       Impact factor: 3.501

Review 3.  The function of adenosylcobalamin in the mechanism of ribonucleoside triphosphate reductase from Lactobacillus leichmannii.

Authors:  C C Lawrence; J Stubbe
Journal:  Curr Opin Chem Biol       Date:  1998-10       Impact factor: 8.822

4.  Diversity of corrinoids in acetogenic bacteria. P-cresolylcobamide from Sporomusa ovata, 5-methoxy-6-methylbenzimidazolylcobamide from Clostridium formicoaceticum and vitamin B12 from Acetobacterium woodii.

Authors:  E Stupperich; H J Eisinger; B Kräutler
Journal:  Eur J Biochem       Date:  1988-03-01

5.  The E. coli BtuCD structure: a framework for ABC transporter architecture and mechanism.

Authors:  Kaspar P Locher; Allen T Lee; Douglas C Rees
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

6.  Absorption, plasma transport, and cellular retention of cobalamin analogues in the rabbit. Evidence for the existence of multiple mechanisms that prevent the absorption and tissue dissemination of naturally occurring cobalamin analogues.

Authors:  J F Kolhouse; R H Allen
Journal:  J Clin Invest       Date:  1977-12       Impact factor: 14.808

7.  Reductive dechlorination of tetrachloroethene to ethene by a two-component enzyme pathway.

Authors:  J K Magnuson; R V Stern; J M Gossett; S H Zinder; D R Burris
Journal:  Appl Environ Microbiol       Date:  1998-04       Impact factor: 4.792

8.  Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi.

Authors:  Frank E Löffler; Jun Yan; Kirsti M Ritalahti; Lorenz Adrian; Elizabeth A Edwards; Konstantinos T Konstantinidis; Jochen A Müller; Heather Fullerton; Stephen H Zinder; Alfred M Spormann
Journal:  Int J Syst Evol Microbiol       Date:  2012-04-27       Impact factor: 2.747

9.  Selective utilization of exogenous amino acids by Dehalococcoides ethenogenes strain 195 and its effects on growth and dechlorination activity.

Authors:  Wei-Qin Zhuang; Shan Yi; Xueyang Feng; Stephen H Zinder; Yinjie J Tang; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2011-09-02       Impact factor: 4.792

10.  Apparent ruminal synthesis and intestinal disappearance of vitamin B12 and its analogs in dairy cows.

Authors:  C L Girard; D E Santschi; S P Stabler; R H Allen
Journal:  J Dairy Sci       Date:  2009-09       Impact factor: 4.034

View more
  45 in total

1.  Effects of Sulfate Reduction on Trichloroethene Dechlorination by Dehalococcoides-Containing Microbial Communities.

Authors:  Xinwei Mao; Alexandra Polasko; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

2.  Identification of specific corrinoids reveals corrinoid modification in dechlorinating microbial communities.

Authors:  Yujie Men; Erica C Seth; Shan Yi; Terence S Crofts; Robert H Allen; Michiko E Taga; Lisa Alvarez-Cohen
Journal:  Environ Microbiol       Date:  2014-06-02       Impact factor: 5.491

3.  Structural insights into the function of the nicotinate mononucleotide:phenol/p-cresol phosphoribosyltransferase (ArsAB) enzyme from Sporomusa ovata.

Authors:  Sean A Newmister; Chi Ho Chan; Jorge C Escalante-Semerena; Ivan Rayment
Journal:  Biochemistry       Date:  2012-10-15       Impact factor: 3.162

4.  Human gut microbes use multiple transporters to distinguish vitamin B₁₂ analogs and compete in the gut.

Authors:  Patrick H Degnan; Natasha A Barry; Kenny C Mok; Michiko E Taga; Andrew L Goodman
Journal:  Cell Host Microbe       Date:  2014-01-15       Impact factor: 21.023

5.  Gut microbes take their vitamins.

Authors:  Erica D Sonnenburg; Justin L Sonnenburg
Journal:  Cell Host Microbe       Date:  2014-01-15       Impact factor: 21.023

6.  Functional heterologous production of reductive dehalogenases from Desulfitobacterium hafniense strains.

Authors:  Anita Mac Nelly; Marco Kai; Aleš Svatoš; Gabriele Diekert; Torsten Schubert
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

7.  Sustainable growth of Dehalococcoides mccartyi 195 by corrinoid salvaging and remodeling in defined lactate-fermenting consortia.

Authors:  Yujie Men; Erica C Seth; Shan Yi; Robert H Allen; Michiko E Taga; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2014-01-24       Impact factor: 4.792

8.  Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions.

Authors:  Yujie Men; Ke Yu; Jacob Bælum; Ying Gao; Julien Tremblay; Emmanuel Prestat; Ben Stenuit; Susannah G Tringe; Janet Jansson; Tong Zhang; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

9.  Selective Utilization of Benzimidazolyl-Norcobamides as Cofactors by the Tetrachloroethene Reductive Dehalogenase of Sulfurospirillum multivorans.

Authors:  Sebastian Keller; Cindy Kunze; Martin Bommer; Christian Paetz; Riya C Menezes; Aleš Svatoš; Holger Dobbek; Torsten Schubert
Journal:  J Bacteriol       Date:  2018-03-26       Impact factor: 3.490

10.  Organic cofactors in the metabolism of Dehalococcoides mccartyi strains.

Authors:  Christian J Schipp; Ernest Marco-Urrea; Anja Kublik; Jana Seifert; Lorenz Adrian
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.