Literature DB >> 22917471

Combination of crossflow ultrafiltration, monolithic affinity filtration, and quantitative reverse transcriptase PCR for rapid concentration and quantification of model viruses in water.

Lu Pei1, Martin Rieger, Sandra Lengger, Sonja Ott, Claudia Zawadsky, Nils Marten Hartmann, Hans-Christoph Selinka, Andreas Tiehm, Reinhard Niessner, Michael Seidel.   

Abstract

We present a rapid and effective adsorption-elution method based on monolithic affinity filtration (MAF) for the concentration and purification of waterborne viruses. The MAF column consists of a hydrolyzed macroporous epoxy-based polymer. High recoveries were achieved by columns for the bacterial virus (bacteriophage) MS2 110 (±19)%, as model organism, as well as for human adenoviruses 42.4 (±3.4)% and murine noroviruses 42.6 (±1.9)%. This new concentration and purification method was combined with crossflow ultrafiltration (CUF). Because of the adsorption of the examined viruses to the macroporous surface of the MAF column at pH 3, concentrated matrix components by CUF can be removed. Bacteriophages MS2 were spiked in tap water and concentrated with the new CUF-MAF concentration method by a volumetric factor of 10(4) within 33 min. Furthermore, the detection limit for quantification of bacteriophage MS2 by quantitative reverse transcriptase PCR (qRT-PCR) could be improved from 79.47 to 0.0056 GU mL(-1) by a factor of 1.4 × 10(4). In a first study, we have shown that this method could also be applied for river water containing naturally MS2 and MS2-like phages.

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Year:  2012        PMID: 22917471     DOI: 10.1021/es302304t

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  5 in total

1.  Elution Is a Critical Step for Recovering Human Adenovirus 40 from Tap Water and Surface Water by Cross-Flow Ultrafiltration.

Authors:  Hang Shi; Irene Xagoraraki; Kristin N Parent; Merlin L Bruening; Volodymyr V Tarabara
Journal:  Appl Environ Microbiol       Date:  2016-07-29       Impact factor: 4.792

2.  Rapid and efficient filtration-based procedure for separation and safe analysis of CBRN mixed samples.

Authors:  Mostafa Bentahir; Frederic Laduron; Leonid Irenge; Jérôme Ambroise; Jean-Luc Gala
Journal:  PLoS One       Date:  2014-02-05       Impact factor: 3.240

3.  Evaluation of Methods for the Concentration and Extraction of Viruses from Sewage in the Context of Metagenomic Sequencing.

Authors:  Mathis Hjort Hjelmsø; Maria Hellmér; Xavier Fernandez-Cassi; Natàlia Timoneda; Oksana Lukjancenko; Michael Seidel; Dennis Elsässer; Frank M Aarestrup; Charlotta Löfström; Sílvia Bofill-Mas; Josep F Abril; Rosina Girones; Anna Charlotte Schultz
Journal:  PLoS One       Date:  2017-01-18       Impact factor: 3.240

Review 4.  Recent Advances in Nanoparticle Concentration and Their Application in Viral Detection Using Integrated Sensors.

Authors:  Brian M Dincau; Yongkuk Lee; Jong-Hoon Kim; Woon-Hong Yeo
Journal:  Sensors (Basel)       Date:  2017-10-11       Impact factor: 3.576

5.  Macroporous epoxy-based monoliths for rapid quantification of Pseudomonas aeruginosa by adsorption elution method optimized for qPCR.

Authors:  Lisa Göpfert; Julia Klüpfel; Charlotte Heinritz; Martin Elsner; Michael Seidel
Journal:  Anal Bioanal Chem       Date:  2020-10-03       Impact factor: 4.142

  5 in total

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