Literature DB >> 22905870

Biosynthesis and function of posttranscriptional modifications of transfer RNAs.

Basma El Yacoubi1, Marc Bailly, Valérie de Crécy-Lagard.   

Abstract

Posttranscriptional modifications of transfer RNAs (tRNAs) are critical for all core aspects of tRNA function, such as folding, stability, and decoding. Most tRNA modifications were discovered in the 1970s; however, the near-complete description of the genes required to introduce the full set of modifications in both yeast and Escherichia coli is very recent. This led to a new appreciation of the key roles of tRNA modifications and tRNA modification enzymes as checkpoints for tRNA integrity and for integrating translation with other cellular functions such as transcription, primary metabolism, and stress resistance. A global survey of tRNA modification enzymes shows that the functional constraints that drive the presence of modifications are often conserved, but the solutions used to fulfill these constraints differ among different kingdoms, organisms, and species.

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Year:  2012        PMID: 22905870     DOI: 10.1146/annurev-genet-110711-155641

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  253 in total

1.  Can Protein Expression Be Regulated by Modulation of tRNA Modification Profiles?

Authors:  Leticia Pollo-Oliveira; Valérie de Crécy-Lagard
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

Review 2.  Intersections of post-transcriptional gene regulatory mechanisms with intermediary metabolism.

Authors:  Waqar Arif; Gandhar Datar; Auinash Kalsotra
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-01-11       Impact factor: 4.490

3.  AtTrm5a catalyses 1-methylguanosine and 1-methylinosine formation on tRNAs and is important for vegetative and reproductive growth in Arabidopsis thaliana.

Authors:  Xiaohuan Jin; Zhengyi Lv; Junbao Gao; Rui Zhang; Ting Zheng; Ping Yin; Dongqin Li; Liangcai Peng; Xintao Cao; Yan Qin; Staffan Persson; Bo Zheng; Peng Chen
Journal:  Nucleic Acids Res       Date:  2019-01-25       Impact factor: 16.971

Review 4.  RNA modifications and structures cooperate to guide RNA-protein interactions.

Authors:  Cole J T Lewis; Tao Pan; Auinash Kalsotra
Journal:  Nat Rev Mol Cell Biol       Date:  2017-02-01       Impact factor: 94.444

5.  The MiaA tRNA modification enzyme is necessary for robust RpoS expression in Escherichia coli.

Authors:  Karl M Thompson; Susan Gottesman
Journal:  J Bacteriol       Date:  2013-12-02       Impact factor: 3.490

6.  Manipulation of cytokinin level in the ergot fungus Claviceps purpurea emphasizes its contribution to virulence.

Authors:  Sabine Kind; Janine Hinsch; Josef Vrabka; Michaela Hradilová; Mária Majeská-Čudejková; Paul Tudzynski; Petr Galuszka
Journal:  Curr Genet       Date:  2018-05-30       Impact factor: 3.886

7.  Mitochondria Export Sulfur Species Required for Cytosolic tRNA Thiolation.

Authors:  Alok Pandey; Jayashree Pain; Nathaniel Dziuba; Ashutosh K Pandey; Andrew Dancis; Paul A Lindahl; Debkumar Pain
Journal:  Cell Chem Biol       Date:  2018-04-26       Impact factor: 8.116

8.  The t6A modification acts as a positive determinant for the anticodon nuclease PrrC, and is distinctively nonessential in Streptococcus mutans.

Authors:  Jo Marie Bacusmo; Silvia S Orsini; Jennifer Hu; Michael DeMott; Patrick C Thiaville; Ameer Elfarash; Mellie June Paulines; Diego Rojas-Benítez; Birthe Meineke; Chris Deutsch; Dirk Iwata-Reuyl; Patrick A Limbach; Peter C Dedon; Kelly C Rice; Stewart Shuman; Valérie de Crécy-Lagard
Journal:  RNA Biol       Date:  2017-09-13       Impact factor: 4.652

9.  Kinetic Analysis and Probing with Substrate Analogues of the Reaction Pathway of the Nitrile Reductase QueF from Escherichia coli.

Authors:  Jihye Jung; Tibor Czabany; Birgit Wilding; Norbert Klempier; Bernd Nidetzky
Journal:  J Biol Chem       Date:  2016-10-17       Impact factor: 5.157

10.  A cyclic form of N6-threonylcarbamoyladenosine as a widely distributed tRNA hypermodification.

Authors:  Kenjyo Miyauchi; Satoshi Kimura; Tsutomu Suzuki
Journal:  Nat Chem Biol       Date:  2012-12-16       Impact factor: 15.040

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