Literature DB >> 22904996

(1S,2R)-1-[(E)-(Thio-phen-2-yl-methyl-idene)amino]-indan-2-ol.

Min Jeong Go1, Ka Hyun Park, Hwi Hyun Lee, Junseong Lee.   

Abstract

In the title compound, C(14)H(13)NOS, the dihedral angle formed by the mean planes through the indane ring system and the thio-phene ring is 85.04 (11)°. The imine bond is located in the thio-phene plane [the S-C-C-N torsion angle is 0.00 (3)°] and an intra-molecular O-H⋯N hydrogen bond is observed.

Entities:  

Year:  2012        PMID: 22904996      PMCID: PMC3415009          DOI: 10.1107/S1600536812032783

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal complexes containing amino­indanol ligands, see: Lee et al. (2007 ▶); Flores-Lopes et al. (2000 ▶). For metal comlexes with thio­phene-type ligands, see: Jeong et al. (2011 ▶); Dong et al. (2006 ▶); Lee et al. (1999 ▶).

Experimental

Crystal data

C14H13NOS M = 243.31 Monoclinic, a = 5.8640 (2) Å b = 13.4454 (5) Å c = 8.0118 (3) Å β = 92.258 (2)° V = 631.19 (4) Å3 Z = 2 Mo Kα radiation μ = 0.24 mm−1 T = 296 K 0.25 × 0.20 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.943, T max = 0.965 7148 measured reflections 3182 independent reflections 2848 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.131 S = 1.03 3182 reflections 155 parameters 1 restraint H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.27 e Å−3 Absolute structure: Flack (1983 ▶), 1201 Friedel pairs Flack parameter: 0.06 (8) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032783/ff2077sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032783/ff2077Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812032783/ff2077Isup3.cdx Supplementary material file. DOI: 10.1107/S1600536812032783/ff2077Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13NOSF(000) = 256
Mr = 243.31Dx = 1.280 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 5424 reflections
a = 5.8640 (2) Åθ = 2.5–30.4°
b = 13.4454 (5) ŵ = 0.24 mm1
c = 8.0118 (3) ÅT = 296 K
β = 92.258 (2)°Block, white
V = 631.19 (4) Å30.25 × 0.20 × 0.15 mm
Z = 2
Bruker APEXII CCD diffractometer3182 independent reflections
Radiation source: fine-focus sealed tube2848 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
φ and ω scansθmax = 30.7°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −8→7
Tmin = 0.943, Tmax = 0.965k = −15→18
7148 measured reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H-atom parameters constrained
wR(F2) = 0.131w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3182 reflectionsΔρmax = 0.25 e Å3
155 parametersΔρmin = −0.27 e Å3
1 restraintAbsolute structure: Flack (1983), 1201 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.06 (8)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O0.3762 (3)0.41344 (15)0.6763 (2)0.0694 (4)
H10.39620.47360.68450.104*
S0.84192 (7)0.69970 (5)0.55448 (6)0.05798 (16)
C90.3596 (3)0.40337 (14)1.0537 (2)0.0437 (4)
C140.5379 (3)0.46986 (12)1.0333 (2)0.0431 (3)
C41.0148 (3)0.64078 (15)0.7010 (2)0.0473 (4)
C130.5668 (4)0.55083 (16)1.1369 (3)0.0602 (5)
H130.68660.59501.12320.072*
C31.2263 (3)0.68631 (19)0.7167 (3)0.0552 (5)
H31.34330.66570.79040.066*
C11.0474 (3)0.78383 (18)0.5133 (3)0.0567 (5)
H1A1.02860.83490.43560.068*
C50.9397 (3)0.55622 (17)0.7985 (3)0.0524 (4)
H51.04160.52740.87610.063*
C60.6804 (3)0.43819 (15)0.8891 (3)0.0508 (4)
H60.81900.40430.93120.061*
C21.2422 (3)0.76835 (17)0.6062 (3)0.0573 (5)
H21.37240.80730.59850.069*
C80.3710 (4)0.32062 (16)0.9292 (3)0.0570 (5)
H8A0.22040.30410.88300.068*
H8B0.43950.26160.97940.068*
C70.5206 (4)0.36346 (16)0.7957 (3)0.0574 (5)
H70.60850.31100.74280.069*
C120.4134 (6)0.5654 (2)1.2626 (3)0.0789 (8)
H120.43140.61941.33450.095*
C100.2064 (4)0.4177 (2)1.1781 (3)0.0594 (5)
H100.08740.37321.19250.071*
C110.2347 (5)0.5002 (3)1.2812 (3)0.0742 (7)
H110.13130.51171.36410.089*
N0.7401 (3)0.52068 (15)0.7810 (2)0.0549 (4)
U11U22U33U12U13U23
O0.0800 (10)0.0776 (11)0.0494 (8)−0.0161 (9)−0.0110 (7)0.0048 (8)
S0.0389 (2)0.0805 (3)0.0542 (3)0.0031 (2)−0.00272 (16)0.0050 (3)
C90.0500 (8)0.0434 (8)0.0370 (8)0.0001 (6)−0.0051 (6)0.0072 (6)
C140.0453 (8)0.0416 (8)0.0418 (8)0.0025 (6)−0.0075 (6)0.0049 (7)
C40.0335 (7)0.0623 (10)0.0462 (9)0.0047 (6)0.0029 (6)0.0021 (8)
C130.0775 (14)0.0474 (10)0.0549 (12)−0.0071 (9)−0.0102 (10)0.0007 (9)
C30.0331 (6)0.0706 (13)0.0619 (11)0.0030 (8)0.0003 (6)0.0081 (10)
C10.0487 (9)0.0717 (12)0.0505 (11)0.0071 (9)0.0133 (8)0.0074 (9)
C50.0376 (7)0.0647 (12)0.0548 (10)0.0089 (7)0.0015 (7)0.0091 (9)
C60.0395 (8)0.0552 (10)0.0576 (11)0.0098 (7)0.0010 (7)0.0069 (8)
C20.0385 (8)0.0706 (13)0.0634 (12)−0.0013 (8)0.0105 (8)0.0034 (10)
C80.0693 (12)0.0416 (9)0.0596 (13)−0.0063 (8)−0.0029 (9)0.0023 (8)
C70.0661 (12)0.0512 (10)0.0552 (11)0.0080 (8)0.0043 (9)−0.0086 (9)
C120.125 (2)0.0626 (15)0.0490 (13)0.0113 (14)−0.0034 (13)−0.0128 (11)
C100.0629 (12)0.0736 (14)0.0417 (10)−0.0035 (9)0.0018 (8)0.0130 (9)
C110.0851 (17)0.0953 (19)0.0427 (11)0.0132 (14)0.0091 (10)0.0013 (12)
N0.0383 (7)0.0697 (11)0.0569 (10)0.0033 (7)0.0031 (6)0.0104 (8)
O—C71.421 (3)C1—H1A0.9300
O—H10.8200C5—N1.267 (3)
S—C11.695 (2)C5—H50.9300
S—C41.7143 (19)C6—N1.458 (3)
C9—C101.381 (3)C6—C71.546 (3)
C9—C141.390 (2)C6—H60.9800
C9—C81.498 (3)C2—H20.9300
C14—C131.376 (3)C8—C71.523 (3)
C14—C61.513 (3)C8—H8A0.9700
C4—C31.384 (3)C8—H8B0.9700
C4—C51.457 (3)C7—H70.9800
C13—C121.390 (4)C12—C111.379 (5)
C13—H130.9300C12—H120.9300
C3—C21.420 (3)C10—C111.390 (4)
C3—H30.9300C10—H100.9300
C1—C21.355 (3)C11—H110.9300
C7—O—H1109.5C14—C6—H6110.1
C1—S—C492.06 (10)C7—C6—H6110.1
C10—C9—C14120.60 (19)C1—C2—C3112.79 (18)
C10—C9—C8129.15 (19)C1—C2—H2123.6
C14—C9—C8110.23 (16)C3—C2—H2123.6
C13—C14—C9120.86 (19)C9—C8—C7103.23 (16)
C13—C14—C6128.70 (18)C9—C8—H8A111.1
C9—C14—C6110.44 (16)C7—C8—H8A111.1
C3—C4—C5125.80 (18)C9—C8—H8B111.1
C3—C4—S111.18 (15)C7—C8—H8B111.1
C5—C4—S122.99 (14)H8A—C8—H8B109.1
C14—C13—C12118.8 (2)O—C7—C8107.87 (19)
C14—C13—H13120.6O—C7—C6110.60 (17)
C12—C13—H13120.6C8—C7—C6105.13 (18)
C4—C3—C2111.57 (17)O—C7—H7111.0
C4—C3—H3124.2C8—C7—H7111.0
C2—C3—H3124.2C6—C7—H7111.0
C2—C1—S112.40 (17)C11—C12—C13120.3 (2)
C2—C1—H1A123.8C11—C12—H12119.8
S—C1—H1A123.8C13—C12—H12119.8
N—C5—C4122.17 (19)C9—C10—C11118.3 (2)
N—C5—H5118.9C9—C10—H10120.9
C4—C5—H5118.9C11—C10—H10120.9
N—C6—C14113.08 (16)C12—C11—C10121.1 (2)
N—C6—C7111.23 (18)C12—C11—H11119.4
C14—C6—C7102.12 (15)C10—C11—H11119.4
N—C6—H6110.1C5—N—C6117.62 (17)
D—H···AD—HH···AD···AD—H···A
O—H1···N0.822.222.682 (3)116
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O—H1⋯N0.822.222.682 (3)116
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