| Literature DB >> 22904964 |
Samad Shoghpour, Amir Keykha, Hadi Amiri Rudbari, Mohammad Rahimizadeh, Mehdi Bakavoli, Mehrdad Pourayoubi, Francesco Nicolò.
Abstract
In the title compound, C(5)H(5)N(3)O, the isoxazole ring is essentially planar, with a maximum deviation of 0.007 (1) Å from the least-squares plane. The N atom of the amine group exhibits sp(2) character (sum of bond angles around this atom = 358°). In the crystal, mol-ecules are aggregated by two kinds of N-H⋯N hydrogen bonds into fused R(2) (2)(12) and R(6) (6)(26) rings, forming a slightly puckered two-dimensional array lying parallel to (101).Entities:
Year: 2012 PMID: 22904964 PMCID: PMC3414977 DOI: 10.1107/S1600536812032667
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H5N3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2187 reflections |
| θ = 2.8–26.2° | |
| µ = 0.10 mm−1 | |
| β = 100.780 (2)° | Irregular, colourless |
| 0.56 × 0.26 × 0.20 mm | |
| Bruker APEXII CCD diffractometer | 1277 independent reflections |
| Radiation source: fine-focus sealed tube | 1072 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.0°, θmin = 3.3° |
| Absorption correction: multi-scan ( | |
| 5275 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1277 reflections | (Δ/σ)max = 0.001 |
| 91 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.8940 (2) | 0.77984 (4) | 0.37710 (11) | 0.0430 (3) | |
| C2 | 0.8212 (3) | 0.89315 (6) | 0.30725 (13) | 0.0343 (3) | |
| N1 | 0.9900 (3) | 0.78822 (6) | 0.21727 (13) | 0.0454 (3) | |
| N2 | 0.6888 (4) | 0.84546 (6) | 0.57048 (14) | 0.0463 (3) | |
| N3 | 0.6449 (4) | 1.02356 (6) | 0.30830 (16) | 0.0577 (4) | |
| C4 | 0.7269 (3) | 0.96534 (6) | 0.30883 (14) | 0.0384 (3) | |
| C3 | 0.9420 (3) | 0.85487 (7) | 0.17972 (14) | 0.0381 (3) | |
| C5 | 1.0051 (4) | 0.88260 (8) | 0.01801 (16) | 0.0518 (4) | |
| H5A | 1.1058 | 0.8459 | −0.0394 | 0.078* | |
| H5B | 1.1637 | 0.9221 | 0.0372 | 0.078* | |
| H5C | 0.7866 | 0.8977 | −0.0482 | 0.078* | |
| C1 | 0.7919 (3) | 0.84280 (6) | 0.42663 (14) | 0.0347 (3) | |
| H2A | 0.647 (4) | 0.8074 (10) | 0.617 (2) | 0.063 (5)* | |
| H2B | 0.610 (4) | 0.8842 (10) | 0.608 (2) | 0.061 (5)* |
| O1 | 0.0636 (6) | 0.0243 (4) | 0.0437 (5) | 0.0043 (4) | 0.0167 (4) | −0.0011 (3) |
| C2 | 0.0426 (6) | 0.0264 (6) | 0.0346 (6) | 0.0016 (4) | 0.0092 (5) | −0.0006 (4) |
| N1 | 0.0611 (7) | 0.0367 (6) | 0.0413 (6) | 0.0057 (5) | 0.0168 (5) | −0.0060 (4) |
| N2 | 0.0752 (8) | 0.0257 (6) | 0.0434 (6) | 0.0018 (5) | 0.0256 (6) | 0.0023 (4) |
| N3 | 0.0844 (10) | 0.0318 (6) | 0.0616 (8) | 0.0114 (6) | 0.0260 (7) | 0.0054 (5) |
| C4 | 0.0504 (7) | 0.0306 (7) | 0.0367 (6) | 0.0018 (5) | 0.0145 (5) | 0.0021 (4) |
| C3 | 0.0420 (6) | 0.0358 (6) | 0.0369 (6) | 0.0029 (5) | 0.0083 (5) | −0.0038 (5) |
| C5 | 0.0622 (8) | 0.0581 (9) | 0.0384 (7) | 0.0072 (7) | 0.0180 (6) | 0.0027 (6) |
| C1 | 0.0440 (6) | 0.0237 (6) | 0.0369 (6) | −0.0003 (4) | 0.0090 (5) | −0.0026 (4) |
| O1—C1 | 1.3383 (13) | N2—H2A | 0.842 (19) |
| O1—N1 | 1.4367 (13) | N2—H2B | 0.870 (18) |
| C2—C1 | 1.3836 (16) | N3—C4 | 1.1424 (16) |
| C2—C4 | 1.4098 (16) | C3—C5 | 1.4877 (17) |
| C2—C3 | 1.4204 (16) | C5—H5A | 0.9600 |
| N1—C3 | 1.2988 (16) | C5—H5B | 0.9600 |
| N2—C1 | 1.3154 (16) | C5—H5C | 0.9600 |
| C1—O1—N1 | 108.74 (8) | C2—C3—C5 | 127.57 (12) |
| C1—C2—C4 | 126.86 (10) | C3—C5—H5A | 109.5 |
| C1—C2—C3 | 104.75 (10) | C3—C5—H5B | 109.5 |
| C4—C2—C3 | 128.25 (11) | H5A—C5—H5B | 109.5 |
| C3—N1—O1 | 105.83 (9) | C3—C5—H5C | 109.5 |
| C1—N2—H2A | 119.3 (12) | H5A—C5—H5C | 109.5 |
| C1—N2—H2B | 122.4 (11) | H5B—C5—H5C | 109.5 |
| H2A—N2—H2B | 116.3 (16) | N2—C1—O1 | 117.57 (10) |
| N3—C4—C2 | 178.79 (15) | N2—C1—C2 | 133.44 (11) |
| N1—C3—C2 | 111.67 (11) | O1—C1—C2 | 109.00 (10) |
| N1—C3—C5 | 120.74 (11) | ||
| C1—O1—N1—C3 | 0.14 (14) | N1—O1—C1—N2 | 179.10 (11) |
| O1—N1—C3—C2 | 0.70 (14) | N1—O1—C1—C2 | −0.94 (13) |
| O1—N1—C3—C5 | −178.01 (10) | C4—C2—C1—N2 | −2.8 (2) |
| C1—C2—C3—N1 | −1.26 (14) | C3—C2—C1—N2 | −178.75 (15) |
| C4—C2—C3—N1 | −177.17 (12) | C4—C2—C1—O1 | 177.29 (12) |
| C1—C2—C3—C5 | 177.35 (12) | C3—C2—C1—O1 | 1.31 (13) |
| C4—C2—C3—C5 | 1.4 (2) |
| H··· | ||||
| N2—H2 | 0.842 (19) | 2.118 (19) | 2.9567 (16) | 174.2 (16) |
| N2—H2 | 0.870 (18) | 2.174 (18) | 3.0402 (17) | 173.8 (15) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.842 (19) | 2.118 (19) | 2.9567 (16) | 174.2 (16) |
| N2—H2 | 0.870 (18) | 2.174 (18) | 3.0402 (17) | 173.8 (15) |
Symmetry codes: (i) ; (ii) .