Literature DB >> 22904924

2-Eth-oxy-6-({2-[(3-eth-oxy-2-hy-droxy-benzyl-idene)amino]-benz-yl}imino-meth-yl)phenol.

K U Ambili, S S Sreejith, Jinsa Mary Jacob, M Sithambaresan, M R Prathapachandra Kurup.   

Abstract

The title compound, C(25)H(26)N(2)O(4), exists in an E conformation with respect to each azomethine link. The two phenol-substituted benzene rings are twisted away from the plane of the diimine benzene ring by dihedral angles of 27.25 (5) and 56.67 (5)°. The mol-ecular structure is stabilized by intra-molecular O-H⋯N hydrogen bonds.

Entities:  

Year:  2012        PMID: 22904924      PMCID: PMC3414937          DOI: 10.1107/S1600536812031479

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of salen Schiff bases, see: Cozzi (2004 ▶); Hodnett & Dunn (1970 ▶). For the synthesis of Schiff bases, see: Tümer (2000 ▶). For a related structure, see: Aslantaş et al. (2007 ▶).

Experimental

Crystal data

C25H26N2O4 M = 418.48 Monoclinic, a = 4.8315 (4) Å b = 17.5414 (14) Å c = 25.828 (2) Å β = 94.356 (3)° V = 2182.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.40 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.979, T max = 0.983 32150 measured reflections 3833 independent reflections 2543 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.112 S = 1.05 3833 reflections 291 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.13 e Å−3 Δρmin = −0.13 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812031479/fj2580sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031479/fj2580Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812031479/fj2580Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H26N2O4F(000) = 888
Mr = 418.48Dx = 1.273 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5446 reflections
a = 4.8315 (4) Åθ = 2.3–22.4°
b = 17.5414 (14) ŵ = 0.09 mm1
c = 25.828 (2) ÅT = 296 K
β = 94.356 (3)°Needle-like, orange
V = 2182.6 (3) Å30.40 × 0.20 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3833 independent reflections
Radiation source: fine-focus sealed tube2543 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.044
ω and φ scanθmax = 25.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −5→5
Tmin = 0.979, Tmax = 0.983k = −20→20
32150 measured reflectionsl = −30→30
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.038H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.112w = 1/[σ2(Fo2) + (0.0493P)2 + 0.3451P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
3833 reflectionsΔρmax = 0.13 e Å3
291 parametersΔρmin = −0.13 e Å3
2 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0062 (9)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.5523 (3)1.08404 (8)0.43051 (5)0.0645 (4)
O21.1570 (3)1.09379 (8)0.35604 (5)0.0598 (4)
O30.0532 (3)0.93676 (8)0.17006 (5)0.0543 (4)
O4−0.3152 (3)0.82995 (8)0.15297 (5)0.0659 (4)
N10.8660 (3)1.03221 (9)0.27970 (5)0.0466 (4)
N20.4050 (3)1.03122 (8)0.13518 (5)0.0445 (4)
C11.8136 (6)1.16138 (15)0.48999 (10)0.0968 (9)
H1A1.85771.19600.46300.145*
H1B1.96021.16200.51720.145*
H1C1.64291.17680.50370.145*
C21.7824 (4)1.08294 (13)0.46832 (8)0.0634 (6)
H2A1.94971.06790.45240.076*
H2B1.74961.04690.49570.076*
C31.4950 (4)1.01888 (11)0.40288 (7)0.0479 (5)
C41.6259 (4)0.94994 (12)0.41106 (8)0.0589 (5)
H41.76820.94530.43720.071*
C51.5485 (5)0.88751 (12)0.38081 (8)0.0669 (6)
H51.63800.84110.38690.080*
C61.3413 (4)0.89335 (12)0.34193 (8)0.0582 (5)
H61.29130.85100.32170.070*
C71.2044 (3)0.96269 (10)0.33256 (6)0.0433 (4)
C81.2814 (3)1.02555 (10)0.36311 (7)0.0431 (4)
C90.9881 (4)0.96941 (11)0.29046 (7)0.0464 (5)
H90.93760.92650.27080.056*
C100.6616 (3)1.03497 (11)0.23529 (6)0.0471 (5)
H10A0.48281.04940.24700.057*
H10B0.64300.98470.21980.057*
C110.7426 (3)1.09114 (10)0.19477 (7)0.0413 (4)
C120.9465 (4)1.14566 (11)0.20497 (7)0.0503 (5)
H121.03991.14750.23780.060*
C131.0149 (4)1.19732 (11)0.16787 (8)0.0583 (5)
H131.15291.23340.17560.070*
C140.8783 (4)1.19519 (11)0.11950 (8)0.0610 (6)
H140.92121.23050.09450.073*
C150.6775 (4)1.14086 (11)0.10774 (7)0.0550 (5)
H150.58661.13940.07470.066*
C160.6101 (3)1.08823 (10)0.14499 (7)0.0419 (4)
C170.3525 (4)1.00201 (11)0.09022 (7)0.0468 (5)
H170.45101.01910.06290.056*
C180.1456 (3)0.94344 (10)0.08038 (7)0.0438 (4)
C190.0901 (4)0.91471 (12)0.03008 (7)0.0565 (5)
H190.18240.93470.00280.068*
C20−0.0987 (4)0.85754 (13)0.02086 (8)0.0636 (6)
H20−0.13340.8385−0.01260.076*
C21−0.2384 (4)0.82791 (12)0.06090 (9)0.0604 (6)
H21−0.36710.78910.05410.072*
C22−0.1905 (4)0.85472 (11)0.11067 (7)0.0493 (5)
C230.0053 (3)0.91322 (10)0.12070 (7)0.0430 (4)
C24−0.4979 (4)0.76620 (12)0.14644 (10)0.0709 (6)
H24A−0.39960.72240.13410.085*
H24B−0.65130.77800.12130.085*
C25−0.6032 (6)0.74931 (17)0.19800 (12)0.1079 (10)
H25A−0.44920.74070.22300.162*
H25B−0.71810.70460.19540.162*
H25C−0.71020.79180.20880.162*
H2O1.031 (4)1.0877 (14)0.3316 (6)0.090 (8)*
H3O0.172 (4)0.9724 (10)0.1691 (10)0.103 (9)*
U11U22U33U12U13U23
O10.0646 (9)0.0605 (9)0.0640 (9)0.0055 (7)−0.0227 (7)−0.0080 (7)
O20.0650 (9)0.0476 (9)0.0632 (9)0.0063 (7)−0.0189 (7)−0.0030 (7)
O30.0597 (8)0.0607 (9)0.0431 (8)−0.0100 (7)0.0075 (6)−0.0064 (7)
O40.0606 (8)0.0640 (10)0.0739 (10)−0.0166 (7)0.0109 (7)−0.0022 (8)
N10.0454 (8)0.0537 (10)0.0400 (8)−0.0027 (7)−0.0006 (7)0.0008 (7)
N20.0416 (8)0.0480 (9)0.0432 (9)0.0004 (7)−0.0005 (6)0.0010 (7)
C10.115 (2)0.0734 (18)0.0933 (19)−0.0083 (15)−0.0501 (16)−0.0043 (15)
C20.0626 (12)0.0727 (16)0.0519 (12)−0.0012 (11)−0.0152 (10)0.0006 (11)
C30.0471 (10)0.0514 (13)0.0448 (11)−0.0009 (9)−0.0006 (8)0.0009 (9)
C40.0594 (12)0.0619 (14)0.0536 (12)0.0102 (10)−0.0080 (10)0.0044 (11)
C50.0766 (14)0.0535 (14)0.0691 (14)0.0177 (11)−0.0043 (12)0.0057 (12)
C60.0705 (13)0.0456 (12)0.0576 (13)0.0023 (10)0.0004 (10)−0.0035 (10)
C70.0465 (10)0.0436 (11)0.0400 (10)−0.0036 (8)0.0043 (8)0.0056 (9)
C80.0451 (10)0.0412 (11)0.0428 (10)0.0020 (8)0.0031 (8)0.0063 (9)
C90.0510 (10)0.0495 (12)0.0391 (10)−0.0096 (9)0.0060 (8)−0.0006 (9)
C100.0421 (9)0.0580 (12)0.0405 (10)−0.0053 (8)−0.0009 (8)0.0031 (9)
C110.0383 (9)0.0430 (10)0.0425 (10)0.0024 (8)0.0036 (7)0.0001 (8)
C120.0482 (10)0.0503 (12)0.0517 (11)−0.0047 (9)0.0001 (9)−0.0025 (10)
C130.0593 (12)0.0485 (12)0.0672 (14)−0.0123 (10)0.0059 (10)−0.0003 (10)
C140.0736 (14)0.0491 (13)0.0609 (14)−0.0082 (10)0.0093 (11)0.0105 (10)
C150.0641 (12)0.0540 (13)0.0463 (11)−0.0020 (10)−0.0005 (9)0.0061 (10)
C160.0388 (9)0.0429 (11)0.0440 (10)0.0007 (8)0.0030 (8)0.0002 (8)
C170.0482 (10)0.0528 (12)0.0394 (11)0.0020 (9)0.0032 (8)0.0031 (9)
C180.0439 (9)0.0472 (11)0.0394 (10)0.0044 (8)−0.0025 (8)−0.0033 (9)
C190.0628 (12)0.0649 (14)0.0411 (11)0.0010 (11)−0.0010 (9)−0.0038 (10)
C200.0668 (13)0.0709 (15)0.0508 (13)0.0024 (12)−0.0115 (10)−0.0182 (11)
C210.0501 (11)0.0577 (13)0.0712 (15)−0.0023 (10)−0.0094 (10)−0.0147 (12)
C220.0408 (9)0.0494 (12)0.0573 (13)0.0023 (9)0.0011 (9)−0.0023 (10)
C230.0402 (9)0.0468 (11)0.0414 (11)0.0059 (8)−0.0009 (8)−0.0045 (9)
C240.0572 (12)0.0480 (13)0.1072 (19)−0.0059 (10)0.0038 (12)0.0088 (12)
C250.099 (2)0.093 (2)0.134 (2)−0.0265 (16)0.0211 (18)0.0369 (18)
O1—C31.365 (2)C10—H10A0.9700
O1—C21.423 (2)C10—H10B0.9700
O2—C81.346 (2)C11—C121.384 (2)
O2—H2O0.8502 (11)C11—C161.393 (2)
O3—C231.343 (2)C12—C131.377 (3)
O3—H3O0.8501 (11)C12—H120.9300
O4—C221.358 (2)C13—C141.368 (3)
O4—C241.427 (2)C13—H130.9300
N1—C91.270 (2)C14—C151.377 (3)
N1—C101.456 (2)C14—H140.9300
N2—C171.277 (2)C15—C161.390 (2)
N2—C161.417 (2)C15—H150.9300
C1—C21.489 (3)C17—C181.443 (2)
C1—H1A0.9600C17—H170.9300
C1—H1B0.9600C18—C231.390 (2)
C1—H1C0.9600C18—C191.400 (2)
C2—H2A0.9700C19—C201.364 (3)
C2—H2B0.9700C19—H190.9300
C3—C41.374 (3)C20—C211.379 (3)
C3—C81.404 (2)C20—H200.9300
C4—C51.380 (3)C21—C221.372 (3)
C4—H40.9300C21—H210.9300
C5—C61.367 (3)C22—C231.407 (2)
C5—H50.9300C24—C251.491 (4)
C6—C71.397 (3)C24—H24A0.9700
C6—H60.9300C24—H24B0.9700
C7—C81.390 (2)C25—H25A0.9600
C7—C91.455 (2)C25—H25B0.9600
C9—H90.9300C25—H25C0.9600
C10—C111.510 (2)
C3—O1—C2117.69 (15)C13—C12—C11121.82 (18)
C8—O2—H2O106.0 (17)C13—C12—H12119.1
C23—O3—H3O105.4 (18)C11—C12—H12119.1
C22—O4—C24117.63 (16)C14—C13—C12119.52 (18)
C9—N1—C10118.48 (16)C14—C13—H13120.2
C17—N2—C16122.26 (15)C12—C13—H13120.2
C2—C1—H1A109.5C13—C14—C15120.20 (19)
C2—C1—H1B109.5C13—C14—H14119.9
H1A—C1—H1B109.5C15—C14—H14119.9
C2—C1—H1C109.5C14—C15—C16120.34 (18)
H1A—C1—H1C109.5C14—C15—H15119.8
H1B—C1—H1C109.5C16—C15—H15119.8
O1—C2—C1107.27 (18)C15—C16—C11119.93 (16)
O1—C2—H2A110.3C15—C16—N2122.85 (16)
C1—C2—H2A110.3C11—C16—N2117.21 (15)
O1—C2—H2B110.3N2—C17—C18122.22 (16)
C1—C2—H2B110.3N2—C17—H17118.9
H2A—C2—H2B108.5C18—C17—H17118.9
O1—C3—C4125.73 (17)C23—C18—C19119.22 (17)
O1—C3—C8114.93 (16)C23—C18—C17120.68 (16)
C4—C3—C8119.35 (18)C19—C18—C17120.07 (17)
C3—C4—C5120.62 (18)C20—C19—C18120.32 (19)
C3—C4—H4119.7C20—C19—H19119.8
C5—C4—H4119.7C18—C19—H19119.8
C6—C5—C4120.56 (19)C19—C20—C21120.34 (19)
C6—C5—H5119.7C19—C20—H20119.8
C4—C5—H5119.7C21—C20—H20119.8
C5—C6—C7120.20 (19)C22—C21—C20121.08 (19)
C5—C6—H6119.9C22—C21—H21119.5
C7—C6—H6119.9C20—C21—H21119.5
C8—C7—C6119.32 (16)O4—C22—C21126.19 (18)
C8—C7—C9120.42 (16)O4—C22—C23114.74 (16)
C6—C7—C9120.25 (17)C21—C22—C23119.07 (18)
O2—C8—C7122.08 (15)O3—C23—C18122.37 (16)
O2—C8—C3117.98 (16)O3—C23—C22117.65 (16)
C7—C8—C3119.95 (17)C18—C23—C22119.97 (16)
N1—C9—C7121.94 (17)O4—C24—C25107.5 (2)
N1—C9—H9119.0O4—C24—H24A110.2
C7—C9—H9119.0C25—C24—H24A110.2
N1—C10—C11111.81 (14)O4—C24—H24B110.2
N1—C10—H10A109.3C25—C24—H24B110.2
C11—C10—H10A109.3H24A—C24—H24B108.5
N1—C10—H10B109.3C24—C25—H25A109.5
C11—C10—H10B109.3C24—C25—H25B109.5
H10A—C10—H10B107.9H25A—C25—H25B109.5
C12—C11—C16118.15 (16)C24—C25—H25C109.5
C12—C11—C10122.49 (16)H25A—C25—H25C109.5
C16—C11—C10119.36 (15)H25B—C25—H25C109.5
C3—O1—C2—C1175.91 (19)C14—C15—C16—C111.1 (3)
C2—O1—C3—C45.6 (3)C14—C15—C16—N2179.84 (17)
C2—O1—C3—C8−174.61 (16)C12—C11—C16—C15−2.1 (2)
O1—C3—C4—C5179.47 (19)C10—C11—C16—C15178.31 (17)
C8—C3—C4—C5−0.4 (3)C12—C11—C16—N2179.06 (15)
C3—C4—C5—C60.5 (3)C10—C11—C16—N2−0.5 (2)
C4—C5—C6—C7−0.3 (3)C17—N2—C16—C1530.6 (3)
C5—C6—C7—C80.1 (3)C17—N2—C16—C11−150.65 (17)
C5—C6—C7—C9178.64 (18)C16—N2—C17—C18179.38 (15)
C6—C7—C8—O2−179.86 (16)N2—C17—C18—C23−3.8 (3)
C9—C7—C8—O21.6 (3)N2—C17—C18—C19178.20 (17)
C6—C7—C8—C30.0 (3)C23—C18—C19—C20−0.2 (3)
C9—C7—C8—C3−178.53 (15)C17—C18—C19—C20177.81 (17)
O1—C3—C8—O20.2 (2)C18—C19—C20—C210.5 (3)
C4—C3—C8—O2179.99 (17)C19—C20—C21—C22−0.3 (3)
O1—C3—C8—C7−179.72 (15)C24—O4—C22—C215.1 (3)
C4—C3—C8—C70.1 (3)C24—O4—C22—C23−174.61 (16)
C10—N1—C9—C7176.94 (14)C20—C21—C22—O4−179.98 (19)
C8—C7—C9—N11.0 (3)C20—C21—C22—C23−0.2 (3)
C6—C7—C9—N1−177.52 (17)C19—C18—C23—O3178.33 (16)
C9—N1—C10—C11−119.33 (18)C17—C18—C23—O30.3 (3)
N1—C10—C11—C12−14.9 (2)C19—C18—C23—C22−0.3 (3)
N1—C10—C11—C16164.62 (15)C17—C18—C23—C22−178.31 (16)
C16—C11—C12—C131.6 (3)O4—C22—C23—O31.6 (2)
C10—C11—C12—C13−178.91 (17)C21—C22—C23—O3−178.17 (16)
C11—C12—C13—C140.1 (3)O4—C22—C23—C18−179.72 (16)
C12—C13—C14—C15−1.2 (3)C21—C22—C23—C180.5 (3)
C13—C14—C15—C160.6 (3)C22—O4—C24—C25178.99 (18)
D—H···AD—HH···AD···AD—H···A
O2—H2O···N10.85 (1)1.79 (1)2.5711 (19)151 (2)
O3—H3O···N20.85 (1)1.80 (1)2.5844 (19)152 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2O⋯N10.85 (1)1.79 (1)2.5711 (19)151 (2)
O3—H3O⋯N20.85 (1)1.80 (1)2.5844 (19)152 (2)
  3 in total

1.  Metal-Salen Schiff base complexes in catalysis: practical aspects.

Authors:  Pier Giorgio Cozzi
Journal:  Chem Soc Rev       Date:  2004-08-13       Impact factor: 54.564

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structure-antitumor activity correlation of some Schiff bases.

Authors:  E M Hodnett; W J Dunn
Journal:  J Med Chem       Date:  1970-07       Impact factor: 7.446

  3 in total
  1 in total

1.  (±)-trans-6,6'-Dieth-oxy-2,2'-[cyclo-hexane-1,2-diylbis(nitrilo-methanylyl-idene)]diphenol monohydrate.

Authors:  Nithya Mohan; S S Sreejith; M Sithambaresan; M R Prathapachandra Kurup
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-22
  1 in total

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