| Literature DB >> 22904893 |
Hui-Ping Xiong, Shou-Hong Gao, Chun-Tong Li, Zhi-Jun Wu.
Abstract
IN THE TITLE COMPOUND (COMMON NAME: iodiconazole), C(19)H(19)F(2)IN(4)O, there is an intra-molecular O-H⋯N hydrogen bond and mol-ecules are linked by weak inter-actions only, namely C-H⋯N, C-H⋯O and C-H⋯F hydrogen bonds, and π-electron ring-π-electron ring inter-actions between the triazole rings with centroid-centroid distances of 3.725 (3) Å.Entities:
Year: 2012 PMID: 22904893 PMCID: PMC3414360 DOI: 10.1107/S160053681203139X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H19F2IN4O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 935 reflections |
| θ = 2.4–27.3° | |
| µ = 1.67 mm−1 | |
| β = 114.895 (5)° | Prism, colourless |
| 0.30 × 0.25 × 0.25 mm | |
| Bruker SMART APEX diffractometer | 3929 independent reflections |
| Radiation source: fine-focus sealed tube | 3441 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 26.3°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 8473 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3929 reflections | Δρmax = 0.66 e Å−3 |
| 249 parameters | Δρmin = −0.89 e Å−3 |
| 1 restraint | Extinction correction: |
| 72 constraints | Extinction coefficient: 0.0042 (2) |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ (F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| I1 | 0.039478 (7) | 0.71329 (5) | 1.084656 (12) | 0.05727 (14) | |
| O1 | 0.14979 (9) | 0.4892 (4) | 0.86484 (13) | 0.0526 (6) | |
| H1 | 0.1635 (13) | 0.562 (7) | 0.8990 (16) | 0.079* | |
| F1 | 0.12653 (7) | 1.0421 (3) | 0.72386 (10) | 0.0579 (5) | |
| F2 | 0.21734 (8) | 0.6966 (5) | 0.64091 (13) | 0.0730 (7) | |
| N1 | 0.18407 (7) | 0.8775 (4) | 0.92893 (12) | 0.0381 (5) | |
| N2 | 0.06131 (9) | 0.6265 (5) | 0.81152 (15) | 0.0512 (7) | |
| N3 | 0.02469 (12) | 0.4885 (7) | 0.8643 (2) | 0.0786 (11) | |
| N4 | 0.04556 (10) | 0.8147 (6) | 0.8307 (2) | 0.0631 (9) | |
| C1 | 0.08547 (10) | 0.8148 (6) | 1.04983 (16) | 0.0428 (7) | |
| C2 | 0.11877 (10) | 0.6647 (5) | 1.05788 (17) | 0.0432 (7) | |
| H2A | 0.1202 | 0.5207 | 1.0775 | 0.052* | |
| C3 | 0.14984 (11) | 0.7318 (5) | 1.03632 (17) | 0.0423 (7) | |
| H3A | 0.1722 | 0.6319 | 1.0421 | 0.051* | |
| C4 | 0.14813 (9) | 0.9441 (5) | 1.00639 (15) | 0.0388 (6) | |
| C5 | 0.11418 (11) | 1.0879 (5) | 0.99801 (16) | 0.0451 (7) | |
| H5A | 0.1122 | 1.2298 | 0.9769 | 0.054* | |
| C6 | 0.08326 (10) | 1.0275 (6) | 1.01995 (17) | 0.0486 (7) | |
| H6A | 0.0612 | 1.1288 | 1.0147 | 0.058* | |
| C7 | 0.18278 (10) | 1.0181 (5) | 0.98510 (15) | 0.0432 (7) | |
| H7A | 0.1782 | 1.1778 | 0.9708 | 0.052* | |
| H7B | 0.2103 | 1.0078 | 1.0242 | 0.052* | |
| C8 | 0.22209 (10) | 0.9452 (7) | 0.91844 (18) | 0.0532 (8) | |
| H8A | 0.2239 | 0.8528 | 0.8829 | 0.080* | |
| H8B | 0.2474 | 0.9226 | 0.9599 | 0.080* | |
| H8C | 0.2198 | 1.1045 | 0.9056 | 0.080* | |
| C9 | 0.14435 (9) | 0.9017 (5) | 0.86661 (15) | 0.0383 (6) | |
| H9A | 0.1464 | 1.0359 | 0.8415 | 0.046* | |
| H9B | 0.1205 | 0.9248 | 0.8787 | 0.046* | |
| C10 | 0.13590 (9) | 0.6840 (5) | 0.82054 (16) | 0.0378 (6) | |
| C11 | 0.15886 (9) | 0.6898 (5) | 0.77369 (15) | 0.0375 (6) | |
| C12 | 0.18560 (10) | 0.5119 (5) | 0.77230 (17) | 0.0471 (7) | |
| H12A | 0.1903 | 0.3885 | 0.8020 | 0.056* | |
| C13 | 0.20542 (11) | 0.5125 (6) | 0.72800 (19) | 0.0535 (8) | |
| H13A | 0.2232 | 0.3917 | 0.7280 | 0.064* | |
| C14 | 0.19842 (11) | 0.6929 (6) | 0.68468 (18) | 0.0490 (8) | |
| C15 | 0.17194 (11) | 0.8736 (6) | 0.68202 (16) | 0.0473 (7) | |
| H15A | 0.1671 | 0.9949 | 0.6516 | 0.057* | |
| C16 | 0.15292 (9) | 0.8656 (5) | 0.72667 (15) | 0.0392 (6) | |
| C17 | 0.08801 (11) | 0.6515 (6) | 0.77506 (18) | 0.0499 (8) | |
| H17A | 0.0779 | 0.7828 | 0.7448 | 0.060* | |
| H17B | 0.0845 | 0.5160 | 0.7470 | 0.060* | |
| C18 | 0.02440 (14) | 0.7188 (9) | 0.8626 (3) | 0.0735 (13) | |
| H18A | 0.0101 | 0.8059 | 0.8827 | 0.088* | |
| C19 | 0.04840 (13) | 0.4356 (8) | 0.8317 (2) | 0.0675 (11) | |
| H19A | 0.0551 | 0.2866 | 0.8239 | 0.081* |
| I1 | 0.04130 (16) | 0.0808 (2) | 0.05347 (18) | −0.01084 (10) | 0.02357 (12) | −0.00551 (11) |
| O1 | 0.0739 (16) | 0.0366 (11) | 0.0525 (14) | −0.0017 (11) | 0.0318 (13) | 0.0096 (10) |
| F1 | 0.0711 (12) | 0.0534 (11) | 0.0545 (11) | 0.0266 (10) | 0.0318 (10) | 0.0207 (9) |
| F2 | 0.0674 (15) | 0.1079 (19) | 0.0620 (14) | −0.0039 (13) | 0.0450 (13) | −0.0128 (13) |
| N1 | 0.0346 (12) | 0.0465 (13) | 0.0348 (12) | −0.0034 (10) | 0.0161 (10) | 0.0018 (10) |
| N2 | 0.0443 (15) | 0.0601 (16) | 0.0555 (17) | −0.0121 (13) | 0.0270 (14) | −0.0102 (14) |
| N3 | 0.069 (2) | 0.095 (3) | 0.092 (3) | −0.020 (2) | 0.054 (2) | −0.009 (2) |
| N4 | 0.0486 (17) | 0.067 (2) | 0.078 (2) | −0.0083 (14) | 0.0309 (17) | −0.0192 (17) |
| C1 | 0.0370 (15) | 0.0553 (18) | 0.0365 (15) | −0.0055 (13) | 0.0159 (13) | −0.0072 (13) |
| C2 | 0.0497 (17) | 0.0382 (15) | 0.0451 (17) | −0.0023 (12) | 0.0232 (15) | 0.0025 (12) |
| C3 | 0.0460 (17) | 0.0410 (15) | 0.0448 (17) | 0.0051 (12) | 0.0241 (15) | 0.0024 (13) |
| C4 | 0.0432 (15) | 0.0389 (15) | 0.0341 (14) | −0.0047 (12) | 0.0160 (12) | −0.0046 (11) |
| C5 | 0.0547 (17) | 0.0373 (15) | 0.0426 (17) | 0.0024 (13) | 0.0198 (14) | 0.0048 (13) |
| C6 | 0.0446 (16) | 0.0522 (18) | 0.0471 (18) | 0.0099 (14) | 0.0174 (14) | 0.0009 (14) |
| C7 | 0.0460 (15) | 0.0450 (16) | 0.0392 (16) | −0.0108 (13) | 0.0184 (13) | −0.0038 (13) |
| C8 | 0.0389 (15) | 0.074 (2) | 0.0492 (19) | −0.0104 (15) | 0.0214 (14) | 0.0001 (17) |
| C9 | 0.0384 (14) | 0.0405 (15) | 0.0380 (15) | 0.0016 (12) | 0.0179 (12) | 0.0011 (12) |
| C10 | 0.0399 (15) | 0.0367 (14) | 0.0394 (16) | −0.0013 (11) | 0.0192 (13) | 0.0020 (12) |
| C11 | 0.0396 (15) | 0.0373 (14) | 0.0350 (15) | −0.0014 (11) | 0.0152 (13) | 0.0002 (11) |
| C12 | 0.0521 (17) | 0.0379 (15) | 0.0497 (18) | 0.0068 (13) | 0.0200 (15) | 0.0032 (13) |
| C13 | 0.0469 (17) | 0.0555 (19) | 0.060 (2) | 0.0086 (14) | 0.0242 (16) | −0.0091 (16) |
| C14 | 0.0409 (17) | 0.069 (2) | 0.0398 (17) | −0.0059 (15) | 0.0197 (14) | −0.0122 (15) |
| C15 | 0.0487 (17) | 0.0569 (18) | 0.0345 (16) | −0.0043 (15) | 0.0157 (14) | 0.0051 (14) |
| C16 | 0.0407 (15) | 0.0408 (15) | 0.0366 (15) | 0.0042 (12) | 0.0167 (13) | 0.0015 (12) |
| C17 | 0.0450 (17) | 0.064 (2) | 0.0450 (18) | −0.0134 (15) | 0.0234 (15) | −0.0101 (15) |
| C18 | 0.049 (2) | 0.104 (4) | 0.081 (3) | −0.012 (2) | 0.040 (2) | −0.025 (3) |
| C19 | 0.061 (2) | 0.068 (2) | 0.087 (3) | −0.0139 (19) | 0.044 (2) | −0.007 (2) |
| I1—C1 | 2.103 (3) | C6—H6A | 0.9300 |
| O1—C10 | 1.429 (4) | C7—H7A | 0.9700 |
| O1—H1 | 0.810 (19) | C7—H7B | 0.9700 |
| F1—C16 | 1.354 (3) | C8—H8A | 0.9600 |
| F2—C14 | 1.356 (4) | C8—H8B | 0.9600 |
| N1—C9 | 1.467 (4) | C8—H8C | 0.9600 |
| N1—C8 | 1.472 (4) | C9—C10 | 1.560 (4) |
| N1—C7 | 1.480 (4) | C9—H9A | 0.9700 |
| N2—C19 | 1.335 (5) | C9—H9B | 0.9700 |
| N2—N4 | 1.360 (4) | C10—C11 | 1.525 (4) |
| N2—C17 | 1.448 (4) | C10—C17 | 1.534 (4) |
| N3—C19 | 1.320 (5) | C11—C12 | 1.393 (4) |
| N3—C18 | 1.339 (6) | C11—C16 | 1.394 (4) |
| N4—C18 | 1.319 (6) | C12—C13 | 1.390 (5) |
| C1—C6 | 1.382 (5) | C12—H12A | 0.9300 |
| C1—C2 | 1.391 (5) | C13—C14 | 1.358 (5) |
| C2—C3 | 1.390 (5) | C13—H13A | 0.9300 |
| C2—H2A | 0.9300 | C14—C15 | 1.375 (5) |
| C3—C4 | 1.383 (4) | C15—C16 | 1.376 (4) |
| C3—H3A | 0.9300 | C15—H15A | 0.9300 |
| C4—C5 | 1.385 (4) | C17—H17A | 0.9700 |
| C4—C7 | 1.510 (4) | C17—H17B | 0.9700 |
| C5—C6 | 1.380 (5) | C18—H18A | 0.9300 |
| C5—H5A | 0.9300 | C19—H19A | 0.9300 |
| C10—O1—H1 | 96 (3) | C10—C9—H9A | 109.4 |
| C9—N1—C8 | 112.2 (2) | N1—C9—H9B | 109.4 |
| C9—N1—C7 | 111.3 (2) | C10—C9—H9B | 109.4 |
| C8—N1—C7 | 108.3 (2) | H9A—C9—H9B | 108.0 |
| C19—N2—N4 | 109.8 (3) | O1—C10—C11 | 110.0 (2) |
| C19—N2—C17 | 129.5 (3) | O1—C10—C17 | 107.3 (3) |
| N4—N2—C17 | 120.7 (3) | C11—C10—C17 | 107.1 (2) |
| C19—N3—C18 | 102.5 (4) | O1—C10—C9 | 107.2 (2) |
| C18—N4—N2 | 101.4 (3) | C11—C10—C9 | 113.4 (2) |
| C6—C1—C2 | 120.0 (3) | C17—C10—C9 | 111.7 (3) |
| C6—C1—I1 | 121.1 (2) | C12—C11—C16 | 115.1 (3) |
| C2—C1—I1 | 118.9 (2) | C12—C11—C10 | 122.0 (3) |
| C3—C2—C1 | 119.4 (3) | C16—C11—C10 | 122.9 (3) |
| C3—C2—H2A | 120.3 | C13—C12—C11 | 122.2 (3) |
| C1—C2—H2A | 120.3 | C13—C12—H12A | 118.9 |
| C4—C3—C2 | 121.3 (3) | C11—C12—H12A | 118.9 |
| C4—C3—H3A | 119.3 | C14—C13—C12 | 118.8 (3) |
| C2—C3—H3A | 119.3 | C14—C13—H13A | 120.6 |
| C3—C4—C5 | 117.9 (3) | C12—C13—H13A | 120.6 |
| C3—C4—C7 | 120.9 (3) | F2—C14—C13 | 119.7 (3) |
| C5—C4—C7 | 121.2 (3) | F2—C14—C15 | 117.6 (3) |
| C6—C5—C4 | 122.0 (3) | C13—C14—C15 | 122.7 (3) |
| C6—C5—H5A | 119.0 | C14—C15—C16 | 116.5 (3) |
| C4—C5—H5A | 119.0 | C14—C15—H15A | 121.7 |
| C5—C6—C1 | 119.3 (3) | C16—C15—H15A | 121.7 |
| C5—C6—H6A | 120.3 | F1—C16—C15 | 116.8 (3) |
| C1—C6—H6A | 120.3 | F1—C16—C11 | 118.5 (3) |
| N1—C7—C4 | 113.2 (2) | C15—C16—C11 | 124.7 (3) |
| N1—C7—H7A | 108.9 | N2—C17—C10 | 114.8 (3) |
| C4—C7—H7A | 108.9 | N2—C17—H17A | 108.6 |
| N1—C7—H7B | 108.9 | C10—C17—H17A | 108.6 |
| C4—C7—H7B | 108.9 | N2—C17—H17B | 108.6 |
| H7A—C7—H7B | 107.8 | C10—C17—H17B | 108.6 |
| N1—C8—H8A | 109.5 | H17A—C17—H17B | 107.5 |
| N1—C8—H8B | 109.5 | N4—C18—N3 | 116.0 (4) |
| H8A—C8—H8B | 109.5 | N4—C18—H18A | 122.0 |
| N1—C8—H8C | 109.5 | N3—C18—H18A | 122.0 |
| H8A—C8—H8C | 109.5 | N3—C19—N2 | 110.3 (4) |
| H8B—C8—H8C | 109.5 | N3—C19—H19A | 124.9 |
| N1—C9—C10 | 111.1 (2) | N2—C19—H19A | 124.9 |
| N1—C9—H9A | 109.4 |
| H··· | ||||
| C9—H9 | 0.97 | 2.60 | 3.045 (4) | 108 |
| C9—H9 | 0.97 | 2.42 | 3.191 (4) | 136 |
| C12—H12 | 0.93 | 2.39 | 2.759 (4) | 103 |
| C17—H17 | 0.97 | 2.43 | 3.061 (4) | 122 |
| O1—H1···N1 | 0.81 (2) | 1.97 (3) | 2.651 (4) | 141 (4) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C9—H9 | 0.97 | 2.60 | 3.045 (4) | 108 |
| C9—H9 | 0.97 | 2.42 | 3.191 (4) | 136 |
| C12—H12 | 0.93 | 2.39 | 2.759 (4) | 103 |
| C17—H17 | 0.97 | 2.43 | 3.061 (4) | 122 |
| O1—H1⋯N1 | 0.81 (2) | 1.97 (3) | 2.651 (4) | 141 (4) |