Literature DB >> 22904866

4-{[Bis(2-hy-droxy-eth-yl)amino]-meth-yl}-6-meth-oxy-2H-chromen-2-one.

Reshma Naik, Ravish Sankolli, G N Anil Kumar, T N Guru Row, Manohar V Kulkarni.   

Abstract

In the title compound, C(15)H(19)NO(5), an intra-molecular O-H⋯O hydrogen bond links the hy-droxy-ethyl side chains, forming a seven-membered ring. In the crystal, mol-ecules are linked into chains via O-H⋯O n class="Chemical">hydrogen bonds along the b axis. Further, mol-ecules are linked by weak inter-molecular C-H⋯O and π-π stacking inter-actions [centroid-centroid distance = 3.707 (4) Å].

Entities:  

Year:  2012        PMID: 22904866      PMCID: PMC3414333          DOI: 10.1107/S1600536812030759

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the properties of coumarins, see: Meng et al. (1989 ▶); Baures et al. (2002 ▶); Jadhav et al. (2010 ▶); Basanagouda et al. (2011 ▶); Kokila et al. (1995 ▶); Khan et al. (2008 ▶). For 4-bromo­meth­yl-6-meth­oxy-2H-chromen-2-one, see: Basanagouda et al. (2011 ▶). For aromatic compounds containing a β-hy­droxy­ethyl side chain, see: Khan et al. (2008 ▶). For n class="Chemical">hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For C—H ⋯O inter­actions, see: Desiraju (2005 ▶). For stacking inter­actions, see: Janiak (2000 ▶). For related literature on 4-bromomethyl-2H-chromen-2-one, see: Basanagouda & Kulkarni (2011 ▶).

Experimental

Crystal data

C15H19NO5 M = 293.31 Monoclinic, a = 9.3038 (5) Å b = 7.9290 (5) Å c = 19.6216 (12) Å β = 92.944 (5)° V = 1445.56 (15) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 123 K 0.2 × 0.18 × 0.18 mm

Data collection

Bruker SMART APEX CCD detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.98, T max = 0.982 14012 measured reflections 2694 independent reflections 1994 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.149 S = 1.02 2694 reflections 194 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.26 e Å−3 Data collection: SMART (Bruker, 2008 ▶); cell refinement: SMART; data reduction: SAINT-Plus (Bruker, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1996 ▶); software used to prepare material for publication: PARST (Nardelli, 1995 ▶) and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812030759/zj2082sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030759/zj2082Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812030759/zj2082Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H19NO5F(000) = 624
Mr = 293.31Dx = 1.348 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2837 reflections
a = 9.3038 (5) Åθ = 2.8–29.6°
b = 7.9290 (5) ŵ = 0.10 mm1
c = 19.6216 (12) ÅT = 123 K
β = 92.944 (5)°Block, white
V = 1445.56 (15) Å30.2 × 0.18 × 0.18 mm
Z = 4
Bruker SMART APEX CCD detector diffractometer1994 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
ω scansθmax = 25.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −11→11
Tmin = 0.98, Tmax = 0.982k = −9→9
14012 measured reflectionsl = −23→23
2694 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.053H-atom parameters constrained
wR(F2) = 0.149w = 1/[σ2(Fo2) + (0.0607P)2 + 0.6914P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2694 reflectionsΔρmax = 0.51 e Å3
194 parametersΔρmin = −0.26 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0048 (14)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6985 (3)0.3637 (5)0.38763 (14)0.0794 (9)
H1A0.64390.28620.35720.119*
H1B0.79540.37870.37130.119*
H1C0.64940.4730.38810.119*
C20.5821 (2)0.2628 (3)0.48505 (12)0.0478 (6)
C30.5966 (3)0.1769 (3)0.54703 (13)0.0576 (7)
H30.68950.14490.56480.069*
C40.4789 (3)0.1386 (3)0.58220 (12)0.0582 (7)
H40.48920.08120.62470.07*
C50.3436 (3)0.1843 (3)0.55550 (11)0.0477 (6)
C60.0911 (3)0.1865 (3)0.57398 (13)0.0587 (6)
C70.0712 (2)0.2717 (3)0.50921 (11)0.0489 (6)
H7−0.02410.29780.49290.059*
C80.1804 (2)0.3160 (3)0.47075 (10)0.0384 (5)
C90.3255 (2)0.2694 (3)0.49382 (10)0.0388 (5)
C100.4483 (2)0.3085 (3)0.45839 (11)0.0403 (5)
H100.43910.36660.4160.048*
C110.1511 (2)0.4227 (3)0.40816 (10)0.0396 (5)
H11A0.04650.4460.40350.048*
H11B0.20090.53220.41510.048*
C120.1882 (2)0.4748 (3)0.28977 (11)0.0533 (6)
H12A0.11480.56080.29940.064*
H12B0.15870.4190.24610.064*
C130.3309 (3)0.5588 (3)0.28329 (13)0.0631 (7)
H13A0.32420.64480.24670.076*
H13B0.36140.61540.32660.076*
C140.1223 (2)0.1916 (3)0.32783 (12)0.0512 (6)
H14A0.02260.21630.31070.061*
H14B0.11710.12260.36970.061*
C150.1966 (3)0.0928 (4)0.27525 (14)0.0663 (7)
H15A0.159−0.0240.27440.08*
H15B0.17410.14330.22980.08*
N10.19564 (16)0.3493 (2)0.34476 (8)0.0376 (4)
O10.2286 (2)0.1440 (2)0.59428 (8)0.0618 (5)
O2−0.0017 (2)0.1540 (3)0.61251 (10)0.0857 (7)
O30.43185 (19)0.4325 (3)0.26743 (10)0.0751 (6)
H3A0.5060.47820.25320.113*
O40.34542 (19)0.0885 (3)0.28742 (12)0.0841 (7)
H4A0.37760.18750.28930.126*
O50.70828 (16)0.2960 (2)0.45453 (9)0.0662 (5)
U11U22U33U12U13U23
C10.0469 (14)0.131 (3)0.0604 (17)−0.0038 (16)0.0068 (12)−0.0128 (18)
C20.0422 (12)0.0498 (13)0.0503 (13)0.0045 (10)−0.0086 (10)−0.0120 (11)
C30.0588 (15)0.0521 (14)0.0592 (15)0.0117 (12)−0.0228 (12)−0.0096 (12)
C40.0791 (18)0.0484 (14)0.0449 (13)0.0037 (12)−0.0171 (12)0.0041 (11)
C50.0628 (14)0.0406 (12)0.0396 (12)−0.0014 (10)0.0002 (10)0.0000 (10)
C60.0666 (16)0.0563 (15)0.0544 (15)−0.0097 (13)0.0150 (13)0.0012 (12)
C70.0491 (12)0.0529 (13)0.0453 (13)−0.0036 (10)0.0101 (10)−0.0010 (11)
C80.0420 (11)0.0376 (11)0.0357 (11)0.0003 (9)0.0038 (8)−0.0056 (9)
C90.0465 (12)0.0340 (11)0.0354 (11)0.0012 (9)−0.0014 (9)−0.0043 (9)
C100.0416 (11)0.0404 (11)0.0383 (11)0.0023 (9)−0.0026 (9)−0.0053 (9)
C110.0349 (10)0.0443 (12)0.0400 (11)0.0048 (9)0.0040 (8)−0.0015 (9)
C120.0523 (13)0.0653 (16)0.0421 (12)0.0122 (11)0.0014 (10)0.0114 (11)
C130.0777 (17)0.0579 (16)0.0551 (15)−0.0041 (14)0.0164 (13)0.0162 (12)
C140.0431 (12)0.0556 (14)0.0556 (14)−0.0050 (10)0.0102 (10)−0.0145 (11)
C150.0559 (15)0.0741 (18)0.0695 (17)0.0041 (13)0.0103 (12)−0.0231 (15)
N10.0332 (8)0.0461 (10)0.0336 (9)0.0010 (7)0.0036 (7)0.0016 (7)
O10.0804 (12)0.0614 (11)0.0441 (9)−0.0060 (9)0.0082 (8)0.0127 (8)
O20.0929 (14)0.0930 (16)0.0747 (13)−0.0181 (12)0.0384 (11)0.0192 (12)
O30.0592 (11)0.0812 (14)0.0872 (14)−0.0104 (10)0.0272 (10)0.0099 (11)
O40.0599 (11)0.0792 (14)0.1143 (17)0.0198 (10)0.0140 (11)−0.0294 (13)
O50.0376 (9)0.0929 (14)0.0672 (12)0.0067 (9)−0.0067 (8)−0.0087 (10)
C1—O51.417 (3)C10—H100.95
C1—H1A0.98C11—N11.453 (2)
C1—H1B0.98C11—H11A0.99
C1—H1C0.98C11—H11B0.99
C2—O51.370 (3)C12—N11.467 (3)
C2—C101.374 (3)C12—C131.497 (3)
C2—C31.394 (3)C12—H12A0.99
C3—C41.358 (4)C12—H12B0.99
C3—H30.95C13—O31.419 (3)
C4—C51.386 (3)C13—H13A0.99
C4—H40.95C13—H13B0.99
C5—O11.382 (3)C14—N11.455 (3)
C5—C91.388 (3)C14—C151.493 (3)
C6—O21.204 (3)C14—H14A0.99
C6—O11.363 (3)C14—H14B0.99
C6—C71.443 (3)C15—O41.393 (3)
C7—C81.343 (3)C15—H15A0.99
C7—H70.95C15—H15B0.99
C8—C91.450 (3)O3—H3A0.84
C8—C111.505 (3)O4—H4A0.84
C9—C101.402 (3)
O5—C1—H1A109.5C8—C11—H11A108.5
O5—C1—H1B109.5N1—C11—H11B108.5
H1A—C1—H1B109.5C8—C11—H11B108.5
O5—C1—H1C109.5H11A—C11—H11B107.5
H1A—C1—H1C109.5N1—C12—C13110.84 (18)
H1B—C1—H1C109.5N1—C12—H12A109.5
O5—C2—C10124.2 (2)C13—C12—H12A109.5
O5—C2—C3115.36 (19)N1—C12—H12B109.5
C10—C2—C3120.4 (2)C13—C12—H12B109.5
C4—C3—C2120.5 (2)H12A—C12—H12B108.1
C4—C3—H3119.7O3—C13—C12107.7 (2)
C2—C3—H3119.7O3—C13—H13A110.2
C3—C4—C5119.3 (2)C12—C13—H13A110.2
C3—C4—H4120.3O3—C13—H13B110.2
C5—C4—H4120.3C12—C13—H13B110.2
O1—C5—C4116.4 (2)H13A—C13—H13B108.5
O1—C5—C9122.0 (2)N1—C14—C15112.37 (19)
C4—C5—C9121.6 (2)N1—C14—H14A109.1
O2—C6—O1117.1 (2)C15—C14—H14A109.1
O2—C6—C7126.1 (3)N1—C14—H14B109.1
O1—C6—C7116.7 (2)C15—C14—H14B109.1
C8—C7—C6123.4 (2)H14A—C14—H14B107.9
C8—C7—H7118.3O4—C15—C14112.7 (2)
C6—C7—H7118.3O4—C15—H15A109.1
C7—C8—C9118.5 (2)C14—C15—H15A109.1
C7—C8—C11119.67 (19)O4—C15—H15B109.1
C9—C8—C11121.66 (17)C14—C15—H15B109.1
C5—C9—C10118.31 (19)H15A—C15—H15B107.8
C5—C9—C8117.74 (19)C11—N1—C14112.88 (16)
C10—C9—C8123.94 (19)C11—N1—C12110.68 (17)
C2—C10—C9119.9 (2)C14—N1—C12114.28 (18)
C2—C10—H10120.1C6—O1—C5121.58 (18)
C9—C10—H10120.1C13—O3—H3A109.5
N1—C11—C8115.19 (17)C15—O4—H4A109.5
N1—C11—H11A108.5C2—O5—C1117.51 (17)
O5—C2—C3—C4179.4 (2)C5—C9—C10—C20.0 (3)
C10—C2—C3—C4−0.6 (4)C8—C9—C10—C2178.38 (19)
C2—C3—C4—C50.7 (4)C7—C8—C11—N1−122.5 (2)
C3—C4—C5—O1−179.1 (2)C9—C8—C11—N162.1 (3)
C3—C4—C5—C9−0.5 (4)N1—C12—C13—O360.9 (3)
O2—C6—C7—C8174.7 (3)N1—C14—C15—O443.9 (3)
O1—C6—C7—C8−3.0 (4)C8—C11—N1—C1461.4 (2)
C6—C7—C8—C92.9 (3)C8—C11—N1—C12−169.10 (17)
C6—C7—C8—C11−172.6 (2)C15—C14—N1—C11−163.4 (2)
O1—C5—C9—C10178.66 (19)C15—C14—N1—C1268.9 (3)
C4—C5—C9—C100.1 (3)C13—C12—N1—C1194.1 (2)
O1—C5—C9—C80.1 (3)C13—C12—N1—C14−137.1 (2)
C4—C5—C9—C8−178.4 (2)O2—C6—O1—C5−176.4 (2)
C7—C8—C9—C5−1.4 (3)C7—C6—O1—C51.6 (3)
C11—C8—C9—C5174.02 (19)C4—C5—O1—C6178.3 (2)
C7—C8—C9—C10−179.8 (2)C9—C5—O1—C6−0.3 (3)
C11—C8—C9—C10−4.4 (3)C10—C2—O5—C1−7.8 (3)
O5—C2—C10—C9−179.68 (19)C3—C2—O5—C1172.2 (2)
C3—C2—C10—C90.3 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O4i0.841.852.685 (3)174
O4—H4A···O30.842.062.875 (3)164
C7—H7···O5ii0.952.563.494 (2)167
C14—H14B···O2iii0.992.483.206 (3)130
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3A⋯O4i 0.841.852.685 (3)174
O4—H4A⋯O30.842.062.875 (3)164
C7—H7⋯O5ii 0.952.563.494 (2)167
C14—H14B⋯O2iii 0.992.483.206 (3)130

Symmetry codes: (i) ; (ii) ; (iii) .

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