Literature DB >> 22904860

2-Meth-oxy-carbonyl-6-nitro-benzoic acid.

Zai-Sheng Lu1, Guong-Zhou Zhu, Han Lu, Xiang-Shan Wang.   

Abstract

In the title compound, C(9)H(7)NO(6), the dihedral angles between the benzene ring and its three substituents are 29.99 (8)° for the nitro, 67.09 (8)° for the carb-oxy and 32.48 (10)° for the meth-oxy-carbonyl group. In the crystal, one classical O-H⋯O and two nonclassical C-H⋯O contacts link adjacent mol-ecules, forming a three-dimensional structure.

Entities:  

Year:  2012        PMID: 22904860      PMCID: PMC3414327          DOI: 10.1107/S1600536812030462

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of the title compound, see: Xu & He (2010 ▶). For related structures, see: Glidewell et al. (2003 ▶); Wang et al. (2006 ▶).

Experimental

Crystal data

C9H7NO6 M = 225.16 Orthorhombic, a = 7.647 (3) Å b = 8.145 (3) Å c = 15.583 (6) Å V = 970.6 (7) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 296 K 0.27 × 0.22 × 0.16 mm

Data collection

Bruker SMART CCD area-detector diffractometer 6820 measured reflections 1010 independent reflections 982 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.077 S = 1.05 1010 reflections 151 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.13 e Å−3 Δρmin = −0.13 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812030462/sj5245sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030462/sj5245Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812030462/sj5245Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H7NO6Dx = 1.541 Mg m3
Mr = 225.16Melting point = 429–431 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 6294 reflections
a = 7.647 (3) Åθ = 2.6–27.1°
b = 8.145 (3) ŵ = 0.13 mm1
c = 15.583 (6) ÅT = 296 K
V = 970.6 (7) Å3Block, colourless
Z = 40.27 × 0.22 × 0.16 mm
F(000) = 464
Bruker SMART CCD area-detector diffractometer982 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.021
Graphite monochromatorθmax = 25.0°, θmin = 3.0°
φ and ω scansh = −9→9
6820 measured reflectionsk = −8→9
1010 independent reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.077w = 1/[σ2(Fo2) + (0.0524P)2 + 0.1444P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
1010 reflectionsΔρmax = 0.13 e Å3
151 parametersΔρmin = −0.13 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.058 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O61.15166 (19)0.64183 (18)0.90968 (8)0.0467 (4)
O51.0302 (2)0.41107 (19)0.95864 (9)0.0504 (4)
O40.6725 (2)0.22147 (17)0.89827 (8)0.0481 (4)
O30.6525 (2)0.4616 (2)0.96756 (9)0.0503 (4)
C50.7676 (2)0.4546 (2)0.82508 (10)0.0319 (4)
O20.4446 (3)0.3360 (3)0.67750 (11)0.0790 (6)
C20.9167 (3)0.5774 (3)0.67363 (12)0.0481 (5)
H2A0.96770.61670.62350.058*
O10.4073 (2)0.4102 (3)0.80807 (11)0.0694 (5)
C60.6778 (2)0.4551 (2)0.74720 (11)0.0359 (4)
N10.4967 (3)0.3961 (2)0.74398 (12)0.0466 (4)
C81.0429 (2)0.5175 (2)0.90536 (11)0.0343 (4)
C70.6900 (2)0.3825 (2)0.90552 (11)0.0353 (4)
C40.9356 (2)0.5210 (2)0.82510 (10)0.0342 (4)
C91.2706 (3)0.6459 (3)0.98203 (13)0.0532 (6)
H9A1.35400.73270.97410.064*
H9B1.33100.54290.98610.064*
H9C1.20570.66491.03380.064*
C31.0080 (3)0.5825 (3)0.74992 (13)0.0430 (5)
H3A1.11970.62770.75100.052*
C10.7503 (3)0.5143 (2)0.67198 (11)0.0436 (5)
H1A0.68720.51120.62100.052*
H10.630 (4)0.178 (3)0.9437 (12)0.078 (9)*
U11U22U33U12U13U23
O60.0477 (8)0.0497 (8)0.0428 (7)−0.0100 (7)−0.0081 (6)0.0050 (6)
O50.0555 (8)0.0542 (8)0.0414 (7)−0.0066 (7)−0.0148 (7)0.0176 (7)
O40.0640 (9)0.0431 (7)0.0372 (7)−0.0043 (7)0.0154 (7)0.0068 (6)
O30.0594 (9)0.0603 (9)0.0311 (7)0.0006 (8)0.0088 (6)−0.0060 (6)
C50.0369 (8)0.0321 (8)0.0267 (8)0.0043 (7)0.0019 (7)0.0008 (7)
O20.0743 (11)0.1103 (15)0.0524 (9)−0.0313 (12)−0.0165 (9)−0.0122 (10)
C20.0598 (12)0.0531 (12)0.0314 (9)−0.0055 (10)0.0045 (9)0.0121 (8)
O10.0423 (8)0.1073 (15)0.0587 (9)−0.0063 (10)0.0043 (8)−0.0097 (10)
C60.0399 (9)0.0363 (9)0.0315 (8)0.0017 (8)−0.0011 (8)0.0015 (7)
N10.0461 (8)0.0542 (10)0.0396 (8)−0.0007 (8)−0.0091 (7)0.0012 (8)
C80.0350 (8)0.0374 (9)0.0304 (8)0.0036 (8)0.0021 (7)0.0026 (8)
C70.0341 (8)0.0443 (10)0.0275 (8)0.0014 (8)0.0016 (8)0.0021 (8)
C40.0397 (9)0.0339 (8)0.0290 (8)0.0022 (8)−0.0002 (7)0.0042 (7)
C90.0470 (11)0.0652 (13)0.0473 (10)−0.0074 (11)−0.0104 (9)−0.0036 (10)
C30.0447 (9)0.0479 (11)0.0364 (8)−0.0054 (9)0.0029 (7)0.0111 (8)
C10.0568 (11)0.0468 (10)0.0271 (8)0.0025 (9)−0.0064 (8)0.0055 (8)
O6—C81.312 (2)C2—H2A0.9300
O6—C91.449 (2)O1—N11.216 (3)
O5—C81.204 (2)C6—C11.383 (3)
O4—C71.323 (3)C6—N11.467 (3)
O4—H10.856 (10)C8—C41.496 (2)
O3—C71.197 (2)C4—C31.389 (3)
C5—C41.394 (3)C9—H9A0.9600
C5—C61.394 (2)C9—H9B0.9600
C5—C71.506 (2)C9—H9C0.9600
O2—N11.213 (2)C3—H3A0.9300
C2—C11.373 (3)C1—H1A0.9300
C2—C31.380 (3)
C8—O6—C9117.11 (15)O3—C7—C5123.81 (18)
C7—O4—H1112 (2)O4—C7—C5110.80 (15)
C4—C5—C6116.91 (16)C3—C4—C5120.48 (17)
C4—C5—C7120.96 (15)C3—C4—C8119.57 (17)
C6—C5—C7122.11 (16)C5—C4—C8119.86 (15)
C1—C2—C3119.78 (18)O6—C9—H9A109.5
C1—C2—H2A120.1O6—C9—H9B109.5
C3—C2—H2A120.1H9A—C9—H9B109.5
C1—C6—C5122.78 (18)O6—C9—H9C109.5
C1—C6—N1117.60 (17)H9A—C9—H9C109.5
C5—C6—N1119.58 (16)H9B—C9—H9C109.5
O2—N1—O1123.7 (2)C2—C3—C4120.93 (19)
O2—N1—C6118.15 (19)C2—C3—H3A119.5
O1—N1—C6118.16 (17)C4—C3—H3A119.5
O5—C8—O6124.84 (17)C2—C1—C6119.08 (18)
O5—C8—C4123.11 (17)C2—C1—H1A120.5
O6—C8—C4112.05 (14)C6—C1—H1A120.5
O3—C7—O4125.37 (18)
C4—C5—C6—C11.6 (3)C6—C5—C4—C3−0.7 (3)
C7—C5—C6—C1−177.04 (16)C7—C5—C4—C3177.95 (18)
C4—C5—C6—N1−176.33 (16)C6—C5—C4—C8−177.14 (16)
C7—C5—C6—N15.0 (3)C7—C5—C4—C81.5 (2)
C1—C6—N1—O230.9 (3)O5—C8—C4—C3−145.9 (2)
C5—C6—N1—O2−151.0 (2)O6—C8—C4—C333.4 (2)
C1—C6—N1—O1−149.0 (2)O5—C8—C4—C530.5 (3)
C5—C6—N1—O129.0 (3)O6—C8—C4—C5−150.10 (16)
C9—O6—C8—O53.2 (3)C1—C2—C3—C41.5 (3)
C9—O6—C8—C4−176.16 (16)C5—C4—C3—C2−0.8 (3)
C4—C5—C7—O367.3 (2)C8—C4—C3—C2175.65 (18)
C6—C5—C7—O3−114.1 (2)C3—C2—C1—C6−0.6 (3)
C4—C5—C7—O4−111.59 (18)C5—C6—C1—C2−0.9 (3)
C6—C5—C7—O467.0 (2)N1—C6—C1—C2177.02 (18)
D—H···AD—HH···AD···AD—H···A
O4—H1···O5i0.86 (1)1.85 (1)2.706 (2)178 (3)
C9—H9C···O2ii0.962.523.465 (3)170
C9—H9B···O3iii0.962.563.291 (3)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O4—H1⋯O5i 0.86 (1)1.85 (1)2.706 (2)178 (3)
C9—H9C⋯O2ii 0.962.523.465 (3)170
C9—H9B⋯O3iii 0.962.563.291 (3)133

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Natural products-based insecticidal agents 6. Design, semisynthesis, and insecticidal activity of novel monomethyl phthalate derivatives of podophyllotoxin against Mythimna separata Walker in vivo.

Authors:  Hui Xu; Xiao-Qiang He
Journal:  Bioorg Med Chem Lett       Date:  2010-06-10       Impact factor: 2.823

3.  3-nitrophthalic acid: C(4) and R(2)(2)(8) motifs of O-H...O hydrogen bonds generate sheets which are linked by C-H...O hydrogen bonds.

Authors:  Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2003-02-18       Impact factor: 1.172

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.