Literature DB >> 22904839

(2E)-1-(4,4''-Difluoro-5'-meth-oxy-1,1':3',1''-terphenyl-4'-yl)-3-[4-(methyl-sulfan-yl)phen-yl]prop-2-en-1-one.

Rajni Kant, Vivek K Gupta, Kamini Kapoor, S Samshuddin, B Narayana.   

Abstract

In the title compound, C(29)H(22)F(2)O(2)S, the central benzene ring makes dihedral angles of 45.83 (7), 38.90 (7) and 55.50 (7)° with the two fluoro-substituted benzene rings and the methyl-sulfanyl-substituted benzene ring, respectively. In the crystal, C-H⋯O contacts connect the mol-ecules into layers lying perpendicular to the c axis. In addition, π-π stacking inter-actions between one of the fluoro-phenyl groups [centroid-centroid distances = 3.681 (1) and 3.818 (1) Å] are observed.

Entities:  

Year:  2012        PMID: 22904839      PMCID: PMC3414306          DOI: 10.1107/S1600536812030139

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological importance of terphenyls, see: Liu (2006 ▶); Gill & Steglich (1987 ▶). For related structures and background to terphenyl chalcones, see: Fun et al. (2011 ▶); Fun, Loh et al. (2012 ▶); Fun, Hemamalini et al. (2012 ▶); Samshuddin et al. (2012 ▶).

Experimental

Crystal data

C29H22F2O2S M = 472.53 Triclinic, a = 6.9341 (3) Å b = 11.4440 (4) Å c = 15.4719 (5) Å α = 89.611 (3)° β = 84.738 (3)° γ = 74.981 (3)° V = 1180.63 (8) Å3 Z = 2 Mo Kα radiation μ = 0.18 mm−1 T = 293 K 0.3 × 0.2 × 0.1 mm

Data collection

Oxford Diffraction Xcalibur Sapphire3 diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.743, T max = 1.000 17866 measured reflections 4637 independent reflections 2891 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.142 S = 1.06 4637 reflections 309 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812030139/gk2507sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030139/gk2507Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812030139/gk2507Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C29H22F2O2SZ = 2
Mr = 472.53F(000) = 492
Triclinic, P1Dx = 1.329 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9341 (3) ÅCell parameters from 6989 reflections
b = 11.4440 (4) Åθ = 3.4–29.0°
c = 15.4719 (5) ŵ = 0.18 mm1
α = 89.611 (3)°T = 293 K
β = 84.738 (3)°Block, colourless
γ = 74.981 (3)°0.3 × 0.2 × 0.1 mm
V = 1180.63 (8) Å3
Oxford Diffraction Xcalibur Sapphire3 diffractometer4637 independent reflections
Radiation source: fine-focus sealed tube2891 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.044
Detector resolution: 16.1049 pixels mm-1θmax = 26.0°, θmin = 3.4°
ω scansh = −8→8
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −14→14
Tmin = 0.743, Tmax = 1.000l = −19→18
17866 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.050P)2 + 0.1774P] where P = (Fo2 + 2Fc2)/3
4637 reflections(Δ/σ)max = 0.001
309 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.29 e Å3
Experimental. CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.34.40 (release 27–08-2010 CrysAlis171. NET) (compiled Aug 27 2010,11:50:40) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.40890 (12)0.64035 (8)0.44889 (6)0.0889 (3)
O10.7122 (3)0.17723 (16)0.18542 (13)0.0650 (5)
O20.3175 (2)0.07240 (15)0.09901 (11)0.0553 (5)
F10.8319 (2)−0.69853 (13)−0.03117 (11)0.0751 (5)
F21.3029 (2)−0.00661 (17)0.42397 (11)0.0909 (6)
C10.5711 (3)0.1332 (2)0.20122 (15)0.0442 (6)
C20.3756 (3)0.2042 (2)0.24325 (15)0.0480 (6)
H20.27240.16640.25440.058*
C30.3434 (4)0.3184 (2)0.26524 (16)0.0530 (6)
H30.44960.35320.25210.064*
C40.5921 (3)0.00322 (19)0.17939 (14)0.0372 (5)
C50.4622 (3)−0.0251 (2)0.12300 (14)0.0399 (5)
C60.4896 (3)−0.1416 (2)0.09174 (14)0.0395 (5)
H60.4048−0.15770.05280.047*
C70.6436 (3)−0.2346 (2)0.11840 (14)0.0380 (5)
C80.7656 (3)−0.2085 (2)0.17810 (14)0.0399 (5)
H80.8633−0.27140.19890.048*
C90.7460 (3)−0.0909 (2)0.20762 (14)0.0375 (5)
C100.6860 (3)−0.3577 (2)0.08015 (15)0.0397 (5)
C110.7337 (3)−0.4601 (2)0.13080 (17)0.0497 (6)
H110.7335−0.45130.19050.060*
C120.7817 (3)−0.5751 (2)0.0935 (2)0.0566 (7)
H120.8123−0.64350.12760.068*
C130.7829 (3)−0.5854 (2)0.00604 (19)0.0508 (7)
C140.7387 (3)−0.4878 (2)−0.04658 (17)0.0508 (6)
H140.7423−0.4979−0.10640.061*
C150.6882 (3)−0.3735 (2)−0.00880 (16)0.0450 (6)
H150.6552−0.3060−0.04360.054*
C160.8901 (3)−0.0692 (2)0.26791 (14)0.0403 (5)
C171.0920 (3)−0.1319 (2)0.25431 (16)0.0468 (6)
H171.1337−0.18810.20880.056*
C181.2309 (4)−0.1124 (2)0.30686 (17)0.0551 (7)
H181.3654−0.15440.29740.066*
C191.1654 (4)−0.0298 (3)0.37315 (18)0.0591 (7)
C200.9699 (4)0.0323 (3)0.38994 (17)0.0588 (7)
H200.93030.08830.43560.071*
C210.8313 (4)0.0105 (2)0.33757 (16)0.0502 (6)
H210.69640.05010.34950.060*
C220.1589 (4)0.3980 (2)0.30834 (16)0.0508 (6)
C23−0.0195 (4)0.3617 (2)0.32391 (18)0.0600 (7)
H23−0.02420.28560.30510.072*
C24−0.1874 (4)0.4378 (3)0.36682 (18)0.0637 (8)
H24−0.30440.41240.37640.076*
C25−0.1853 (4)0.5513 (2)0.39591 (17)0.0582 (7)
C26−0.0107 (4)0.5880 (3)0.3797 (2)0.0715 (8)
H26−0.00700.66460.39790.086*
C270.1582 (4)0.5120 (2)0.3369 (2)0.0682 (8)
H270.27430.53830.32700.082*
C28−0.3394 (5)0.7674 (3)0.4870 (2)0.0957 (11)
H28A−0.22900.74090.52180.144*
H28B−0.45120.81880.52130.144*
H28C−0.30020.81160.43840.144*
C290.1591 (3)0.0508 (2)0.05390 (17)0.0576 (7)
H29A0.21280.0144−0.00180.086*
H29B0.06210.12610.04630.086*
H29C0.0959−0.00270.08700.086*
U11U22U33U12U13U23
S10.0759 (6)0.0692 (6)0.1064 (7)0.0019 (4)0.0114 (5)−0.0202 (5)
O10.0592 (11)0.0438 (11)0.0934 (14)−0.0207 (9)0.0062 (10)0.0036 (10)
O20.0536 (10)0.0405 (10)0.0678 (12)0.0007 (8)−0.0225 (8)−0.0004 (9)
F10.0679 (10)0.0393 (9)0.1142 (14)−0.0066 (7)−0.0084 (9)−0.0239 (9)
F20.0848 (12)0.1172 (16)0.0862 (13)−0.0433 (11)−0.0390 (10)−0.0052 (11)
C10.0496 (14)0.0346 (14)0.0472 (14)−0.0087 (11)−0.0048 (11)0.0046 (11)
C20.0528 (14)0.0345 (14)0.0549 (15)−0.0090 (11)−0.0030 (11)0.0009 (12)
C30.0559 (15)0.0407 (15)0.0605 (17)−0.0097 (12)−0.0042 (12)−0.0028 (13)
C40.0384 (12)0.0306 (12)0.0412 (13)−0.0082 (9)0.0016 (9)−0.0017 (10)
C50.0348 (11)0.0359 (13)0.0457 (14)−0.0037 (10)−0.0034 (10)0.0025 (11)
C60.0364 (12)0.0385 (14)0.0431 (13)−0.0082 (10)−0.0059 (10)0.0010 (11)
C70.0358 (12)0.0339 (13)0.0438 (13)−0.0090 (9)−0.0010 (9)0.0009 (10)
C80.0375 (12)0.0317 (13)0.0478 (14)−0.0035 (9)−0.0064 (10)0.0022 (11)
C90.0349 (11)0.0361 (13)0.0403 (13)−0.0083 (9)0.0010 (9)0.0004 (10)
C100.0312 (11)0.0338 (13)0.0546 (15)−0.0082 (9)−0.0066 (10)−0.0004 (11)
C110.0509 (14)0.0405 (15)0.0583 (16)−0.0124 (11)−0.0060 (11)0.0016 (13)
C120.0520 (15)0.0340 (15)0.084 (2)−0.0098 (11)−0.0099 (13)0.0075 (14)
C130.0366 (13)0.0338 (14)0.081 (2)−0.0063 (10)−0.0062 (12)−0.0131 (14)
C140.0450 (14)0.0481 (16)0.0590 (16)−0.0112 (11)−0.0055 (11)−0.0122 (13)
C150.0420 (13)0.0377 (14)0.0559 (16)−0.0096 (10)−0.0097 (11)0.0001 (12)
C160.0423 (12)0.0379 (13)0.0424 (13)−0.0138 (10)−0.0034 (10)0.0026 (11)
C170.0427 (13)0.0485 (15)0.0499 (15)−0.0131 (11)−0.0036 (10)−0.0011 (12)
C180.0433 (14)0.0634 (18)0.0608 (17)−0.0160 (12)−0.0108 (12)0.0088 (14)
C190.0631 (17)0.068 (2)0.0560 (17)−0.0301 (15)−0.0213 (13)0.0079 (15)
C200.0731 (18)0.0593 (18)0.0465 (15)−0.0198 (14)−0.0109 (13)−0.0065 (13)
C210.0500 (14)0.0500 (16)0.0493 (15)−0.0111 (11)−0.0033 (11)−0.0011 (12)
C220.0557 (15)0.0361 (15)0.0570 (16)−0.0041 (11)−0.0084 (12)−0.0019 (12)
C230.0672 (17)0.0413 (16)0.0694 (19)−0.0096 (13)−0.0077 (14)−0.0066 (14)
C240.0596 (16)0.0539 (18)0.074 (2)−0.0105 (14)−0.0006 (14)−0.0030 (15)
C250.0642 (17)0.0488 (17)0.0535 (17)−0.0005 (13)−0.0042 (12)−0.0051 (13)
C260.078 (2)0.0461 (18)0.087 (2)−0.0097 (15)−0.0068 (16)−0.0193 (16)
C270.0633 (17)0.0477 (17)0.091 (2)−0.0124 (14)0.0013 (15)−0.0157 (16)
C280.117 (3)0.065 (2)0.090 (3)−0.0009 (19)0.004 (2)−0.020 (2)
C290.0407 (13)0.0608 (18)0.0663 (18)−0.0009 (12)−0.0153 (12)0.0047 (14)
S1—C251.753 (3)C14—C151.382 (3)
S1—C281.767 (3)C14—H140.9300
O1—C11.217 (3)C15—H150.9300
O2—C51.368 (3)C16—C211.378 (3)
O2—C291.428 (3)C16—C171.395 (3)
F1—C131.367 (3)C17—C181.377 (3)
F2—C191.367 (3)C17—H170.9300
C1—C21.482 (3)C18—C191.363 (4)
C1—C41.494 (3)C18—H180.9300
C2—C31.310 (3)C19—C201.360 (4)
C2—H20.9300C20—C211.383 (3)
C3—C221.470 (3)C20—H200.9300
C3—H30.9300C21—H210.9300
C4—C91.404 (3)C22—C271.378 (3)
C4—C51.406 (3)C22—C231.404 (3)
C5—C61.381 (3)C23—C241.377 (3)
C6—C71.389 (3)C23—H230.9300
C6—H60.9300C24—C251.381 (4)
C7—C81.392 (3)C24—H240.9300
C7—C101.479 (3)C25—C261.382 (4)
C8—C91.393 (3)C26—C271.380 (4)
C8—H80.9300C26—H260.9300
C9—C161.494 (3)C27—H270.9300
C10—C151.387 (3)C28—H28A0.9600
C10—C111.389 (3)C28—H28B0.9600
C11—C121.387 (3)C28—H28C0.9600
C11—H110.9300C29—H29A0.9600
C12—C131.358 (4)C29—H29B0.9600
C12—H120.9300C29—H29C0.9600
C13—C141.364 (3)
C25—S1—C28103.53 (15)C21—C16—C9122.5 (2)
C5—O2—C29118.40 (19)C17—C16—C9119.5 (2)
O1—C1—C2122.0 (2)C18—C17—C16121.4 (2)
O1—C1—C4120.2 (2)C18—C17—H17119.3
C2—C1—C4117.7 (2)C16—C17—H17119.3
C3—C2—C1122.1 (2)C19—C18—C17118.0 (2)
C3—C2—H2118.9C19—C18—H18121.0
C1—C2—H2118.9C17—C18—H18121.0
C2—C3—C22127.5 (2)C20—C19—C18122.9 (2)
C2—C3—H3116.2C20—C19—F2118.5 (3)
C22—C3—H3116.2C18—C19—F2118.5 (2)
C9—C4—C5118.7 (2)C19—C20—C21118.5 (2)
C9—C4—C1122.53 (19)C19—C20—H20120.7
C5—C4—C1118.6 (2)C21—C20—H20120.7
O2—C5—C6124.1 (2)C16—C21—C20121.0 (2)
O2—C5—C4114.4 (2)C16—C21—H21119.5
C6—C5—C4121.4 (2)C20—C21—H21119.5
C5—C6—C7120.0 (2)C27—C22—C23117.6 (2)
C5—C6—H6120.0C27—C22—C3120.0 (2)
C7—C6—H6120.0C23—C22—C3122.4 (2)
C6—C7—C8118.8 (2)C24—C23—C22120.6 (2)
C6—C7—C10120.8 (2)C24—C23—H23119.7
C8—C7—C10120.2 (2)C22—C23—H23119.7
C7—C8—C9122.0 (2)C23—C24—C25121.2 (3)
C7—C8—H8119.0C23—C24—H24119.4
C9—C8—H8119.0C25—C24—H24119.4
C8—C9—C4118.9 (2)C24—C25—C26118.4 (2)
C8—C9—C16118.8 (2)C24—C25—S1117.0 (2)
C4—C9—C16122.3 (2)C26—C25—S1124.6 (2)
C15—C10—C11118.3 (2)C27—C26—C25120.7 (3)
C15—C10—C7120.1 (2)C27—C26—H26119.7
C11—C10—C7121.5 (2)C25—C26—H26119.7
C12—C11—C10120.9 (2)C22—C27—C26121.6 (3)
C12—C11—H11119.5C22—C27—H27119.2
C10—C11—H11119.5C26—C27—H27119.2
C13—C12—C11118.4 (3)S1—C28—H28A109.5
C13—C12—H12120.8S1—C28—H28B109.5
C11—C12—H12120.8H28A—C28—H28B109.5
C12—C13—C14122.9 (2)S1—C28—H28C109.5
C12—C13—F1118.7 (2)H28A—C28—H28C109.5
C14—C13—F1118.4 (2)H28B—C28—H28C109.5
C13—C14—C15118.3 (2)O2—C29—H29A109.5
C13—C14—H14120.9O2—C29—H29B109.5
C15—C14—H14120.9H29A—C29—H29B109.5
C14—C15—C10121.2 (2)O2—C29—H29C109.5
C14—C15—H15119.4H29A—C29—H29C109.5
C10—C15—H15119.4H29B—C29—H29C109.5
C21—C16—C17118.1 (2)
O1—C1—C2—C30.4 (4)C12—C13—C14—C15−0.7 (3)
C4—C1—C2—C3179.6 (2)F1—C13—C14—C15179.68 (18)
C1—C2—C3—C22−178.9 (2)C13—C14—C15—C101.2 (3)
O1—C1—C4—C953.5 (3)C11—C10—C15—C14−0.7 (3)
C2—C1—C4—C9−125.7 (2)C7—C10—C15—C14176.28 (19)
O1—C1—C4—C5−121.5 (2)C8—C9—C16—C21−140.0 (2)
C2—C1—C4—C559.3 (3)C4—C9—C16—C2140.3 (3)
C29—O2—C5—C613.8 (3)C8—C9—C16—C1739.7 (3)
C29—O2—C5—C4−169.76 (19)C4—C9—C16—C17−140.0 (2)
C9—C4—C5—O2−179.93 (18)C21—C16—C17—C18−2.1 (4)
C1—C4—C5—O2−4.7 (3)C9—C16—C17—C18178.2 (2)
C9—C4—C5—C6−3.4 (3)C16—C17—C18—C190.1 (4)
C1—C4—C5—C6171.84 (19)C17—C18—C19—C200.9 (4)
O2—C5—C6—C7178.6 (2)C17—C18—C19—F2−177.8 (2)
C4—C5—C6—C72.4 (3)C18—C19—C20—C210.2 (4)
C5—C6—C7—C81.3 (3)F2—C19—C20—C21178.9 (2)
C5—C6—C7—C10−174.82 (19)C17—C16—C21—C203.2 (4)
C6—C7—C8—C9−4.1 (3)C9—C16—C21—C20−177.2 (2)
C10—C7—C8—C9172.08 (19)C19—C20—C21—C16−2.3 (4)
C7—C8—C9—C43.1 (3)C2—C3—C22—C27171.7 (3)
C7—C8—C9—C16−176.63 (19)C2—C3—C22—C23−6.8 (4)
C5—C4—C9—C80.7 (3)C27—C22—C23—C24−0.5 (4)
C1—C4—C9—C8−174.35 (19)C3—C22—C23—C24178.1 (2)
C5—C4—C9—C16−179.65 (19)C22—C23—C24—C25−0.2 (4)
C1—C4—C9—C165.3 (3)C23—C24—C25—C261.0 (4)
C6—C7—C10—C1543.8 (3)C23—C24—C25—S1179.5 (2)
C8—C7—C10—C15−132.3 (2)C28—S1—C25—C24173.2 (2)
C6—C7—C10—C11−139.4 (2)C28—S1—C25—C26−8.4 (3)
C8—C7—C10—C1144.6 (3)C24—C25—C26—C27−1.1 (4)
C15—C10—C11—C12−0.2 (3)S1—C25—C26—C27−179.5 (2)
C7—C10—C11—C12−177.2 (2)C23—C22—C27—C260.4 (4)
C10—C11—C12—C130.7 (3)C3—C22—C27—C26−178.2 (3)
C11—C12—C13—C14−0.2 (4)C25—C26—C27—C220.4 (5)
C11—C12—C13—F1179.42 (19)
D—H···AD—HH···AD···AD—H···A
C12—H12···O1i0.932.473.289 (3)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C12—H12⋯O1i 0.932.473.289 (3)147

Symmetry code: (i) .

  8 in total

1.  Natural terphenyls: developments since 1877.

Authors:  Ji-Kai Liu
Journal:  Chem Rev       Date:  2006-06       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Pigments of fungi (Macromycetes).

Authors:  M Gill; W Steglich
Journal:  Fortschr Chem Org Naturst       Date:  1987

4.  (E)-1-(4,4''-Difluoro-5'-meth-oxy-1,1':3',1''-terphenyl-4'-yl)-3-(6-meth-oxy-naphthalen-2-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Madhukar Hemamalini; S Samshuddin; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-16

5.  1-(4,4''-Difluoro-5'-meth-oxy-1,1':3',1''-terphenyl-4'-yl)ethanone.

Authors:  Hoong-Kun Fun; Madhukar Hemamalini; S Samshuddin; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-17

6.  (2E)-1-(4,4''-Difluoro-5'-meth-oxy-1,1':3',1''-terphenyl-4'-yl)-3-(2-fluoro-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Wan-Sin Loh; S Samshuddin; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13

7.  (E)-3-(2-Chloro-phen-yl)-1-(4,4''-difluoro-5'-meth-oxy-1,1':3',1''-terphenyl-4'-yl)prop-2-en-1-one.

Authors:  S Samshuddin; Badiadka Narayana; Hemmige S Yathirajan; Richard Betz; Thomas Gerber; Eric Hosten
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-28

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total

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