Literature DB >> 22904837

(S,E)-3-[(2-Hy-droxy-benzyl-idene)amino]-2-(2-hy-droxy-phen-yl)-2,3-dihydro-quinazolin-4(1H)-one.

Daniel Tinguiano, Adama Sy, Ibrahima Elhadj Thiam, Mohamed Gaye, Pascal Retailleau.   

Abstract

In the title compound, C(21)H(17)N(3)O(3), the dihydro-quinazoline ring adopts a screw-boat conformation and its stereogenic C atom has an S configuration. The dihedral angle between the mean planes of the two hy-droxy-phenyl rings is 86.61 (12)°. The amino H atom forms an intra-molecular hydrogen bond with a phenol O atom, while the hydrazine N atom acts as an acceptor for the H atom of the other phenol group. In the crystal, O-H⋯N and O-H⋯O hydrogen bonds and weak C-H⋯centroid(π-ring) inter-molecular inter-actions are observed, forming chains along [1-10] and [110].

Entities:  

Year:  2012        PMID: 22904837      PMCID: PMC3414304          DOI: 10.1107/S1600536812030012

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and their biological properties, see: Rádl et al. (2000 ▶); Andries et al. (2005 ▶); Alagarsamy et al. (2006 ▶); Ghorab et al. (2007 ▶); El-Azab et al. (2010 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For determination of the absolute configuration, see: Flack (1983 ▶); Hooft et al. (2008 ▶).

Experimental

Crystal data

C21H17N3O3 M = 359.38 Orthorhombic, a = 13.344 (15) Å b = 10.693 (14) Å c = 23.537 (13) Å V = 3358 (6) Å3 Z = 8 Cu Kα radiation μ = 0.79 mm−1 T = 193 K 0.41 × 0.34 × 0.16 mm

Data collection

Rigaku RAPID II R-AXIS conversion diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.720, T max = 0.889 15117 measured reflections 2947 independent reflections 2758 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.098 S = 1.07 2947 reflections 250 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.21 e Å−3 Absolute structure: Flack (1983 ▶), with 1258 Friedel pairs Flack parameter: 0.0 (2) Data collection: CrystalClear-SM Expert (Rigaku, 2009 ▶); cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) interfaced by CRYSTALBUILDER (Welter, 2006 ▶); molecular graphics: PLATON (Spek, 2009 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶) and PLATON. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812030012/jj2144sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030012/jj2144Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812030012/jj2144Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H17N3O3F(000) = 1504
Mr = 359.38Dx = 1.422 Mg m3
Orthorhombic, C2221Cu Kα radiation, λ = 1.54187 Å
Hall symbol: C 2c 2Cell parameters from 7031 reflections
a = 13.344 (15) Åθ = 1.9–68.2°
b = 10.693 (14) ŵ = 0.79 mm1
c = 23.537 (13) ÅT = 193 K
V = 3358 (6) Å3Block, colourless
Z = 80.41 × 0.34 × 0.16 mm
Rigaku RAPID II R-AXIS conversion diffractometer2947 independent reflections
Radiation source: fine-focus rotating anode2758 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.039
profile data from ω scansθmax = 68.2°, θmin = 3.8°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −16→16
Tmin = 0.720, Tmax = 0.889k = −12→11
15117 measured reflectionsl = −28→27
Refinement on F2Hydrogen site location: difference Fourier map
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.035w = 1/[σ2(Fo2) + (0.056P)2 + 1.1889P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.098(Δ/σ)max < 0.001
S = 1.07Δρmax = 0.18 e Å3
2947 reflectionsΔρmin = −0.21 e Å3
250 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.00069 (11)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), with 1258 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.0 (2)
Experimental. Selected IR data (cm-1, KBr pellet): 3400, 3216, 1730, 1650, 1582, 1458, 764.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.49079 (10)0.40376 (14)0.35557 (7)0.0471 (4)
O20.15925 (9)0.01452 (15)0.36712 (6)0.0432 (4)
H2O0.1100−0.03000.36210.052*
O30.3763 (2)0.6657 (2)0.43629 (9)0.0793 (7)
H3O0.38610.59280.42700.119*
N10.34660 (10)0.08134 (15)0.39518 (6)0.0305 (3)
H1N0.3110 (16)0.005 (2)0.3973 (9)0.037*
N20.35606 (10)0.31007 (15)0.38330 (7)0.0320 (4)
N30.32933 (12)0.43142 (16)0.40226 (7)0.0372 (4)
C10.29276 (12)0.19782 (16)0.38113 (8)0.0288 (4)
H10.24010.20850.40980.035*
C20.42664 (12)0.06210 (18)0.36295 (8)0.0314 (4)
C30.46168 (13)−0.06173 (19)0.35216 (9)0.0382 (5)
H30.4282−0.13100.36670.046*
C40.54310 (14)−0.0748 (2)0.32088 (9)0.0458 (5)
H40.5682−0.15350.31200.055*
C50.59031 (15)0.0343 (2)0.30160 (10)0.0480 (6)
H50.64750.02510.27940.058*
C60.55737 (14)0.1572 (2)0.31343 (9)0.0415 (5)
H60.59280.22600.29990.050*
C70.47477 (13)0.17286 (19)0.34431 (8)0.0345 (4)
C80.44402 (13)0.30414 (18)0.36033 (8)0.0341 (4)
C90.24182 (11)0.18717 (17)0.32475 (8)0.0281 (4)
C100.25851 (13)0.26696 (18)0.27833 (8)0.0326 (4)
H100.30380.33260.28210.039*
C110.21035 (14)0.2508 (2)0.22803 (8)0.0385 (5)
H110.22230.30390.19750.046*
C120.14367 (14)0.1541 (2)0.22371 (9)0.0405 (5)
H120.11000.14110.18960.049*
C130.12505 (13)0.0739 (2)0.26992 (8)0.0355 (4)
H130.07930.00890.26600.043*
C140.17329 (12)0.09045 (18)0.32014 (8)0.0313 (4)
C150.24436 (16)0.45674 (19)0.41379 (8)0.0398 (5)
H150.19380.39790.40860.048*
C160.2200 (2)0.5842 (2)0.43671 (9)0.0511 (6)
C170.1267 (2)0.6088 (3)0.44981 (11)0.0760 (10)
H170.07720.54930.44300.091*
C180.1004 (4)0.7261 (5)0.47435 (13)0.1121 (18)
H180.03300.73950.48250.135*
C190.1639 (5)0.8182 (4)0.48665 (14)0.119 (2)
H190.14300.89190.50400.143*
C200.2560 (4)0.7988 (3)0.47299 (11)0.0920 (13)
H200.30410.86030.47910.110*
C210.2836 (3)0.6810 (3)0.44825 (10)0.0665 (8)
U11U22U33U12U13U23
O10.0269 (6)0.0451 (8)0.0693 (10)−0.0139 (6)−0.0023 (6)0.0087 (8)
O20.0262 (7)0.0524 (9)0.0510 (8)−0.0173 (6)−0.0047 (6)0.0142 (7)
O30.1221 (19)0.0582 (12)0.0577 (12)−0.0448 (12)0.0036 (12)−0.0071 (10)
N10.0215 (7)0.0338 (9)0.0362 (8)−0.0038 (6)−0.0006 (6)0.0028 (7)
N20.0227 (7)0.0335 (9)0.0399 (8)−0.0067 (6)−0.0011 (6)−0.0027 (7)
N30.0384 (9)0.0357 (9)0.0374 (8)−0.0059 (7)−0.0025 (7)−0.0016 (7)
C10.0215 (7)0.0305 (10)0.0344 (9)−0.0040 (7)0.0027 (7)0.0000 (8)
C20.0199 (8)0.0429 (11)0.0314 (9)−0.0012 (7)−0.0019 (7)0.0001 (8)
C30.0260 (9)0.0424 (11)0.0461 (11)−0.0003 (8)−0.0039 (8)0.0030 (10)
C40.0293 (9)0.0570 (14)0.0513 (12)0.0113 (9)−0.0021 (8)−0.0075 (11)
C50.0242 (9)0.0714 (16)0.0483 (12)0.0063 (9)0.0037 (8)0.0000 (12)
C60.0205 (9)0.0598 (13)0.0443 (12)−0.0021 (8)0.0015 (8)0.0080 (10)
C70.0223 (8)0.0452 (11)0.0360 (10)−0.0027 (8)−0.0042 (7)0.0052 (9)
C80.0239 (8)0.0406 (11)0.0378 (10)−0.0070 (8)−0.0051 (7)0.0051 (9)
C90.0164 (7)0.0310 (9)0.0370 (9)0.0018 (6)0.0015 (7)−0.0023 (8)
C100.0217 (8)0.0348 (10)0.0413 (10)0.0003 (7)0.0035 (7)0.0021 (8)
C110.0283 (8)0.0512 (12)0.0360 (10)0.0040 (9)0.0030 (8)0.0087 (9)
C120.0287 (9)0.0524 (13)0.0405 (10)0.0083 (9)−0.0070 (8)−0.0051 (9)
C130.0229 (8)0.0360 (10)0.0477 (11)0.0001 (7)−0.0068 (8)−0.0056 (9)
C140.0212 (8)0.0309 (10)0.0416 (10)−0.0005 (7)0.0009 (7)0.0006 (8)
C150.0427 (11)0.0393 (11)0.0376 (10)0.0027 (9)−0.0060 (9)−0.0039 (8)
C160.0797 (16)0.0419 (13)0.0317 (10)0.0166 (12)−0.0107 (10)−0.0029 (9)
C170.088 (2)0.093 (2)0.0472 (14)0.0530 (18)−0.0220 (14)−0.0189 (14)
C180.158 (4)0.125 (3)0.0533 (17)0.105 (3)−0.035 (2)−0.033 (2)
C190.239 (6)0.072 (3)0.0467 (18)0.086 (3)−0.030 (3)−0.0183 (17)
C200.198 (4)0.0386 (17)0.0398 (14)0.003 (2)−0.017 (2)−0.0004 (12)
C210.120 (3)0.0441 (15)0.0353 (12)−0.0033 (16)−0.0030 (14)0.0052 (10)
O1—C81.240 (3)C7—C81.510 (3)
O2—C141.385 (2)C9—C141.385 (3)
O2—H2O0.8200C9—C101.404 (3)
O3—C211.280 (4)C10—C111.358 (3)
O3—H3O0.8200C10—H100.9300
N1—C21.326 (3)C11—C121.368 (3)
N1—C11.475 (3)C11—H110.9300
N1—H1N0.95 (2)C12—C131.407 (3)
N2—C81.294 (3)C12—H120.9300
N2—N31.418 (3)C13—C141.358 (3)
N2—C11.469 (3)C13—H130.9300
N3—C151.197 (3)C15—C161.501 (3)
C1—C91.495 (3)C15—H150.9300
C1—H10.9800C16—C171.310 (4)
C2—C71.417 (3)C16—C211.365 (4)
C2—C31.427 (3)C17—C181.425 (5)
C3—C41.320 (3)C17—H170.9300
C3—H30.9300C18—C191.331 (7)
C4—C51.401 (4)C18—H180.9300
C4—H40.9300C19—C201.288 (6)
C5—C61.414 (4)C19—H190.9300
C5—H50.9300C20—C211.436 (5)
C6—C71.331 (3)C20—H200.9300
C6—H60.9300
C14—O2—H2O109.5C10—C9—C1124.91 (16)
C21—O3—H3O109.5C11—C10—C9121.75 (18)
C2—N1—C1113.27 (15)C11—C10—H10119.1
C2—N1—H1N107.5 (13)C9—C10—H10119.1
C1—N1—H1N119.7 (12)C10—C11—C12117.93 (19)
C8—N2—N3113.87 (15)C10—C11—H11121.0
C8—N2—C1117.86 (16)C12—C11—H11121.0
N3—N2—C1127.89 (15)C11—C12—C13121.21 (18)
C15—N3—N2121.12 (17)C11—C12—H12119.4
N2—C1—N1113.71 (16)C13—C12—H12119.4
N2—C1—C9110.76 (15)C14—C13—C12120.64 (18)
N1—C1—C9110.85 (14)C14—C13—H13119.7
N2—C1—H1107.1C12—C13—H13119.7
N1—C1—H1107.1C13—C14—O2123.69 (17)
C9—C1—H1107.1C13—C14—C9118.61 (18)
N1—C2—C7114.36 (18)O2—C14—C9117.69 (16)
N1—C2—C3120.64 (17)N3—C15—C16119.5 (2)
C7—C2—C3124.88 (17)N3—C15—H15120.3
C4—C3—C2117.8 (2)C16—C15—H15120.3
C4—C3—H3121.1C17—C16—C21113.1 (3)
C2—C3—H3121.1C17—C16—C15118.2 (3)
C3—C4—C5117.6 (2)C21—C16—C15128.7 (3)
C3—C4—H4121.2C16—C17—C18120.4 (4)
C5—C4—H4121.2C16—C17—H17119.8
C4—C5—C6124.8 (2)C18—C17—H17119.8
C4—C5—H5117.6C19—C18—C17125.6 (4)
C6—C5—H5117.6C19—C18—H18117.2
C7—C6—C5118.8 (2)C17—C18—H18117.2
C7—C6—H6120.6C20—C19—C18115.8 (3)
C5—C6—H6120.6C20—C19—H19122.1
C6—C7—C2116.1 (2)C18—C19—H19122.1
C6—C7—C8118.56 (18)C19—C20—C21119.1 (4)
C2—C7—C8125.20 (17)C19—C20—H20120.4
O1—C8—N2116.90 (19)C21—C20—H20120.4
O1—C8—C7129.74 (18)O3—C21—C16117.4 (3)
N2—C8—C7113.35 (16)O3—C21—C20116.6 (3)
C14—C9—C10119.84 (17)C16—C21—C20125.9 (4)
C14—C9—C1115.25 (16)
C8—N2—N3—C15164.97 (18)N2—C1—C9—C14−174.44 (14)
C1—N2—N3—C15−7.7 (3)N1—C1—C9—C1458.4 (2)
C8—N2—C1—N144.5 (2)N2—C1—C9—C105.2 (2)
N3—N2—C1—N1−143.08 (16)N1—C1—C9—C10−122.02 (19)
C8—N2—C1—C9−81.11 (19)C14—C9—C10—C11−1.2 (3)
N3—N2—C1—C991.3 (2)C1—C9—C10—C11179.20 (17)
C2—N1—C1—N2−55.6 (2)C9—C10—C11—C120.4 (3)
C2—N1—C1—C969.98 (19)C10—C11—C12—C130.3 (3)
C1—N1—C2—C731.0 (2)C11—C12—C13—C14−0.2 (3)
C1—N1—C2—C3−152.58 (17)C12—C13—C14—O2−179.43 (16)
N1—C2—C3—C4−178.41 (17)C12—C13—C14—C9−0.6 (3)
C7—C2—C3—C4−2.4 (3)C10—C9—C14—C131.3 (3)
C2—C3—C4—C51.3 (3)C1—C9—C14—C13−179.12 (16)
C3—C4—C5—C60.3 (3)C10—C9—C14—O2−179.83 (16)
C4—C5—C6—C7−1.1 (3)C1—C9—C14—O2−0.2 (2)
C5—C6—C7—C20.1 (3)N2—N3—C15—C16176.71 (16)
C5—C6—C7—C8175.72 (17)N3—C15—C16—C17−179.0 (2)
N1—C2—C7—C6177.84 (17)N3—C15—C16—C21−1.5 (3)
C3—C2—C7—C61.6 (3)C21—C16—C17—C18−1.0 (4)
N1—C2—C7—C82.6 (3)C15—C16—C17—C18176.9 (2)
C3—C2—C7—C8−173.65 (18)C16—C17—C18—C19−0.7 (5)
N3—N2—C8—O1−3.1 (2)C17—C18—C19—C202.5 (5)
C1—N2—C8—O1170.36 (16)C18—C19—C20—C21−2.3 (5)
N3—N2—C8—C7175.68 (14)C17—C16—C21—O3−179.4 (2)
C1—N2—C8—C7−10.8 (2)C15—C16—C21—O33.1 (4)
C6—C7—C8—O1−10.5 (3)C17—C16—C21—C201.0 (4)
C2—C7—C8—O1164.6 (2)C15—C16—C21—C20−176.6 (2)
C6—C7—C8—N2170.89 (17)C19—C20—C21—O3−178.9 (3)
C2—C7—C8—N2−14.0 (3)C19—C20—C21—C160.7 (4)
D—H···AD—HH···AD···AD—H···A
O3—H3O···N30.841.952.704 (4)148
O2—H2O···O1i0.841.732.555 (3)168
C4—H4···Cg3ii0.932.643.546 (5)160
C5—H5···Cg3iii0.932.913.705 (5)141
Table 1

Hydrogen-bond geometry (Å, °)

Cg3 is the centroid of the C16–C21 benzene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3O⋯N30.841.952.704 (4)148
O2—H2O⋯O1i 0.841.732.555 (3)168
C4—H4⋯Cg3ii 0.932.643.546 (5)160
C5—H5⋯Cg3iii 0.932.913.705 (5)141

Symmetry codes: (i) ; (ii) ; (iii) .

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