| Literature DB >> 22904821 |
Abstract
An improved crystal structure of the title compound, C(14)H(12)O(8)S(4), is reported. The structure, previously solved using the heavy-atom method (R = 7.1%), has now been solved using direct methods. Due to the improved quality of the data set an R value of 2.06% could be achieved. In the crystal, C-H⋯S and C-H⋯O contacts link the mol-ecules.Entities:
Year: 2012 PMID: 22904821 PMCID: PMC3414288 DOI: 10.1107/S1600536812029534
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12O8S4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 9962 reflections | |
| θ = 2.5–45.3° | |
| µ = 0.59 mm−1 | |
| α = 100.221 (1)° | |
| β = 99.255 (1)° | Needle, red |
| γ = 99.328 (1)° | 0.64 × 0.16 × 0.15 mm |
| Bruker APEXII CCD area-detector diffractometer | 1534 independent reflections |
| Radiation source: fine-focus sealed tube | 1471 reflections with |
| Graphite monochromator | |
| phi and ω scans | θmax = 25.0°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 10884 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1534 reflections | (Δ/σ)max = 0.026 |
| 120 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.30978 (5) | 0.63798 (4) | 1.10656 (4) | 0.01479 (11) | |
| S2 | 0.06589 (5) | 0.56717 (4) | 0.76932 (4) | 0.01637 (11) | |
| O1 | 0.69629 (14) | 0.93615 (13) | 0.94082 (12) | 0.0194 (2) | |
| O2 | 0.72198 (13) | 0.79160 (12) | 1.14884 (11) | 0.0167 (2) | |
| O3 | 0.27914 (16) | 0.78034 (15) | 0.55357 (13) | 0.0265 (3) | |
| O4 | 0.56544 (14) | 0.69314 (13) | 0.64417 (11) | 0.0181 (2) | |
| C1 | 0.0779 (2) | 0.54255 (17) | 0.97428 (16) | 0.0140 (3) | |
| C2 | 0.4249 (2) | 0.71176 (17) | 0.95464 (16) | 0.0131 (3) | |
| C3 | 0.31610 (19) | 0.67605 (17) | 0.80137 (16) | 0.0138 (3) | |
| C4 | 0.62881 (19) | 0.82552 (17) | 1.00955 (16) | 0.0138 (3) | |
| C5 | 0.9200 (2) | 0.90095 (19) | 1.21844 (18) | 0.0196 (3) | |
| H5A | 1.0006 | 0.8996 | 1.1353 | 0.029* | |
| H5B | 0.9840 | 0.8560 | 1.3075 | 0.029* | |
| H5C | 0.9061 | 1.0194 | 1.2584 | 0.029* | |
| C6 | 0.3832 (2) | 0.72501 (17) | 0.65299 (16) | 0.0153 (3) | |
| C7 | 0.6552 (2) | 0.7573 (2) | 0.51653 (17) | 0.0226 (3) | |
| H7A | 0.5790 | 0.6946 | 0.4108 | 0.034* | |
| H7B | 0.7911 | 0.7391 | 0.5270 | 0.034* | |
| H7C | 0.6548 | 0.8805 | 0.5272 | 0.034* |
| S1 | 0.01005 (18) | 0.02032 (19) | 0.01379 (18) | −0.00123 (13) | 0.00238 (12) | 0.00683 (13) |
| S2 | 0.01129 (18) | 0.02217 (19) | 0.01518 (18) | −0.00117 (13) | 0.00129 (13) | 0.00788 (13) |
| O1 | 0.0162 (5) | 0.0197 (5) | 0.0233 (5) | −0.0007 (4) | 0.0067 (4) | 0.0087 (4) |
| O2 | 0.0108 (5) | 0.0206 (5) | 0.0168 (5) | −0.0020 (4) | 0.0011 (4) | 0.0055 (4) |
| O3 | 0.0216 (6) | 0.0423 (7) | 0.0225 (5) | 0.0111 (5) | 0.0064 (4) | 0.0184 (5) |
| O4 | 0.0158 (5) | 0.0265 (5) | 0.0161 (5) | 0.0054 (4) | 0.0076 (4) | 0.0096 (4) |
| C1 | 0.0116 (6) | 0.0158 (6) | 0.0147 (6) | 0.0017 (5) | 0.0017 (5) | 0.0049 (5) |
| C2 | 0.0127 (6) | 0.0131 (6) | 0.0160 (6) | 0.0035 (5) | 0.0064 (5) | 0.0053 (5) |
| C3 | 0.0109 (6) | 0.0133 (6) | 0.0184 (7) | 0.0019 (5) | 0.0046 (5) | 0.0050 (5) |
| C4 | 0.0126 (6) | 0.0143 (6) | 0.0157 (6) | 0.0035 (5) | 0.0062 (5) | 0.0022 (5) |
| C5 | 0.0104 (7) | 0.0216 (7) | 0.0231 (7) | −0.0023 (5) | 0.0002 (5) | 0.0024 (6) |
| C6 | 0.0154 (7) | 0.0147 (6) | 0.0152 (7) | 0.0009 (5) | 0.0032 (5) | 0.0032 (5) |
| C7 | 0.0188 (7) | 0.0342 (8) | 0.0176 (7) | 0.0022 (6) | 0.0087 (6) | 0.0110 (6) |
| S1—C2 | 1.7452 (13) | C1—C1i | 1.343 (3) |
| S1—C1 | 1.7570 (13) | C2—C3 | 1.3419 (19) |
| S2—C3 | 1.7468 (13) | C2—C4 | 1.4882 (18) |
| S2—C1 | 1.7636 (13) | C3—C6 | 1.4921 (18) |
| O1—C4 | 1.2022 (16) | C5—H5A | 0.9600 |
| O2—C4 | 1.3363 (16) | C5—H5B | 0.9600 |
| O2—C5 | 1.4559 (16) | C5—H5C | 0.9600 |
| O3—C6 | 1.2007 (17) | C7—H7A | 0.9600 |
| O4—C6 | 1.3263 (16) | C7—H7B | 0.9600 |
| O4—C7 | 1.4487 (16) | C7—H7C | 0.9600 |
| C2—S1—C1 | 94.90 (6) | O2—C5—H5A | 109.5 |
| C3—S2—C1 | 94.65 (6) | O2—C5—H5B | 109.5 |
| C4—O2—C5 | 115.25 (10) | H5A—C5—H5B | 109.5 |
| C6—O4—C7 | 115.57 (11) | O2—C5—H5C | 109.5 |
| C1i—C1—S1 | 122.42 (14) | H5A—C5—H5C | 109.5 |
| C1i—C1—S2 | 122.68 (14) | H5B—C5—H5C | 109.5 |
| S1—C1—S2 | 114.90 (7) | O3—C6—O4 | 125.74 (12) |
| C3—C2—C4 | 125.13 (12) | O3—C6—C3 | 122.87 (12) |
| C3—C2—S1 | 117.68 (10) | O4—C6—C3 | 111.34 (11) |
| C4—C2—S1 | 116.86 (10) | O4—C7—H7A | 109.5 |
| C2—C3—C6 | 126.96 (12) | O4—C7—H7B | 109.5 |
| C2—C3—S2 | 117.78 (10) | H7A—C7—H7B | 109.5 |
| C6—C3—S2 | 115.23 (10) | O4—C7—H7C | 109.5 |
| O1—C4—O2 | 125.14 (12) | H7A—C7—H7C | 109.5 |
| O1—C4—C2 | 124.48 (12) | H7B—C7—H7C | 109.5 |
| O2—C4—C2 | 110.33 (11) | ||
| C2—S1—C1—C1i | 178.58 (16) | C5—O2—C4—O1 | 0.21 (18) |
| C2—S1—C1—S2 | −1.44 (8) | C5—O2—C4—C2 | −177.38 (10) |
| C3—S2—C1—C1i | −177.53 (16) | C3—C2—C4—O1 | 22.1 (2) |
| C3—S2—C1—S1 | 2.49 (8) | S1—C2—C4—O1 | −151.10 (11) |
| C1—S1—C2—C3 | −0.67 (11) | C3—C2—C4—O2 | −160.29 (12) |
| C1—S1—C2—C4 | 173.05 (10) | S1—C2—C4—O2 | 26.51 (14) |
| C4—C2—C3—C6 | 7.2 (2) | C7—O4—C6—O3 | 10.1 (2) |
| S1—C2—C3—C6 | −179.69 (10) | C7—O4—C6—C3 | −172.26 (11) |
| C4—C2—C3—S2 | −170.52 (10) | C2—C3—C6—O3 | −137.60 (15) |
| S1—C2—C3—S2 | 2.63 (15) | S2—C3—C6—O3 | 40.13 (17) |
| C1—S2—C3—C2 | −3.06 (11) | C2—C3—C6—O4 | 44.73 (18) |
| C1—S2—C3—C6 | 178.99 (10) | S2—C3—C6—O4 | −137.54 (10) |
| H··· | ||||
| C7—H7 | 0.96 | 2.83 | 3.735 (2) | 158 |
| C5—H5 | 0.96 | 2.50 | 3.324 (2) | 143 |
| C5—H5 | 0.96 | 2.65 | 3.481 (2) | 145 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C7—H7 | 0.96 | 2.83 | 3.735 (2) | 158 |
| C5—H5 | 0.96 | 2.50 | 3.324 (2) | 143 |
| C5—H5 | 0.96 | 2.65 | 3.481 (2) | 145 |
Symmetry codes: (i) ; (ii) ; (iii) .