| Literature DB >> 22904797 |
Jian-Guang Yu, Hai-Xi Zhu, Jiang-Kai Qiu, De-Cai Wang, Hong Xu.
Abstract
In the title compound, C(11)H(8)F(2)N(2)O(2)·0.5H(2)O, the dihedral angle between the benzene and isoxazole rings is 8.08 (3)°. In the crystal, the components are linked by O-H⋯N and N-H⋯O hydrogen bonds, in which the water mol-ecule acts as both a donor and an acceptor, into a tape with an R(4) (4)(16) graph-set motif along the a axis. The water mol-ecule is located on a twofold rotation axis. The methyl H atoms were treated as disordered groups over two sites with a refined site-occupancy ratio of 0.48 (6):0.52 (6).Entities:
Year: 2012 PMID: 22904797 PMCID: PMC3414190 DOI: 10.1107/S1600536812029431
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H8F2N2O2·0.5H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 25 reflections |
| θ = 9–13° | |
| µ = 0.13 mm−1 | |
| β = 120.06 (3)° | Block, white |
| 0.30 × 0.20 × 0.10 mm | |
| Enraf–Nonius CAD-4 diffractometer | 1486 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 25.2°, θmin = 2.1° |
| ω/2θ scans | |
| Absorption correction: multi-scan (North | |
| 2076 measured reflections | 3 standard reflections every 200 reflections |
| 1997 independent reflections | intensity decay: 1% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 1997 reflections | Δρmax = 0.28 e Å−3 |
| 168 parameters | Δρmin = −0.18 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0247 (19) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| O1W | 0.5000 | 0.52321 (17) | 0.2500 | 0.0620 (7) | |
| H1W | 0.505 (2) | 0.564 (2) | 0.193 (3) | 0.093* | |
| N1 | 0.65863 (15) | 0.36286 (13) | 0.32726 (18) | 0.0484 (5) | |
| H1A | 0.6314 (18) | 0.4180 (19) | 0.332 (2) | 0.058* | |
| O1 | 0.66094 (13) | 0.20060 (11) | 0.36060 (16) | 0.0611 (5) | |
| F1 | 0.88573 (17) | 0.40738 (15) | 0.0910 (2) | 0.1141 (8) | |
| C1 | 0.75004 (19) | 0.28877 (17) | 0.2259 (2) | 0.0584 (6) | |
| H1B | 0.7336 | 0.2263 | 0.2381 | 0.070* | |
| F2 | 0.71615 (12) | 0.53616 (10) | 0.28913 (16) | 0.0739 (5) | |
| O2 | 0.49066 (13) | 0.27282 (12) | 0.53567 (16) | 0.0615 (5) | |
| N2 | 0.51344 (18) | 0.37236 (15) | 0.5487 (2) | 0.0658 (6) | |
| C2 | 0.8072 (2) | 0.3024 (2) | 0.1673 (3) | 0.0720 (8) | |
| H2B | 0.8293 | 0.2495 | 0.1403 | 0.086* | |
| C3 | 0.8304 (2) | 0.3937 (2) | 0.1496 (3) | 0.0720 (8) | |
| C4 | 0.80009 (19) | 0.47406 (19) | 0.1878 (2) | 0.0649 (7) | |
| H4A | 0.8162 | 0.5362 | 0.1742 | 0.078* | |
| C5 | 0.74512 (18) | 0.45851 (16) | 0.2468 (2) | 0.0530 (6) | |
| C6 | 0.71701 (16) | 0.36750 (15) | 0.2668 (2) | 0.0461 (5) | |
| C7 | 0.63608 (16) | 0.28191 (15) | 0.37245 (19) | 0.0454 (5) | |
| C8 | 0.57905 (16) | 0.30012 (15) | 0.43950 (19) | 0.0450 (5) | |
| C9 | 0.56469 (19) | 0.38588 (17) | 0.4907 (2) | 0.0556 (6) | |
| H9A | 0.5893 | 0.4460 | 0.4838 | 0.067* | |
| C10 | 0.53140 (17) | 0.23129 (16) | 0.4714 (2) | 0.0492 (6) | |
| C11 | 0.5167 (2) | 0.12579 (18) | 0.4509 (3) | 0.0674 (7) | |
| H11A | 0.4739 | 0.1028 | 0.4827 | 0.101* | 0.48 (6) |
| H11B | 0.5815 | 0.0938 | 0.4950 | 0.101* | 0.48 (6) |
| H11C | 0.4850 | 0.1121 | 0.3617 | 0.101* | 0.48 (6) |
| H11D | 0.5423 | 0.1049 | 0.3970 | 0.101* | 0.52 (6) |
| H11E | 0.4454 | 0.1109 | 0.4112 | 0.101* | 0.52 (6) |
| H11F | 0.5526 | 0.0929 | 0.5311 | 0.101* | 0.52 (6) |
| O1W | 0.0925 (18) | 0.0490 (13) | 0.0742 (16) | 0.000 | 0.0640 (15) | 0.000 |
| N1 | 0.0634 (12) | 0.0366 (9) | 0.0596 (11) | 0.0022 (8) | 0.0415 (10) | 0.0026 (8) |
| O1 | 0.0854 (12) | 0.0377 (9) | 0.0823 (12) | 0.0037 (8) | 0.0584 (10) | 0.0019 (8) |
| F1 | 0.1517 (18) | 0.1052 (14) | 0.1635 (19) | 0.0058 (12) | 0.1374 (17) | 0.0148 (13) |
| C1 | 0.0760 (16) | 0.0463 (12) | 0.0695 (15) | −0.0001 (11) | 0.0489 (14) | 0.0005 (11) |
| F2 | 0.0977 (11) | 0.0427 (8) | 0.1108 (12) | −0.0031 (7) | 0.0743 (10) | −0.0029 (7) |
| O2 | 0.0787 (11) | 0.0558 (10) | 0.0700 (11) | −0.0022 (8) | 0.0522 (9) | 0.0004 (8) |
| N2 | 0.0953 (16) | 0.0509 (12) | 0.0720 (14) | −0.0040 (11) | 0.0574 (14) | −0.0064 (10) |
| C2 | 0.092 (2) | 0.0656 (17) | 0.0854 (18) | 0.0076 (14) | 0.0646 (17) | 0.0003 (14) |
| C3 | 0.0829 (19) | 0.0760 (18) | 0.0865 (19) | −0.0005 (15) | 0.0644 (17) | 0.0076 (15) |
| C4 | 0.0736 (17) | 0.0581 (15) | 0.0808 (18) | −0.0062 (13) | 0.0518 (15) | 0.0070 (13) |
| C5 | 0.0591 (13) | 0.0448 (12) | 0.0642 (14) | 0.0004 (10) | 0.0376 (12) | 0.0015 (10) |
| C6 | 0.0505 (12) | 0.0457 (12) | 0.0474 (12) | 0.0001 (10) | 0.0283 (11) | 0.0022 (9) |
| C7 | 0.0525 (13) | 0.0397 (11) | 0.0467 (12) | −0.0004 (9) | 0.0268 (10) | −0.0004 (9) |
| C8 | 0.0548 (13) | 0.0427 (12) | 0.0415 (11) | −0.0009 (9) | 0.0270 (10) | 0.0009 (9) |
| C9 | 0.0759 (16) | 0.0490 (13) | 0.0541 (13) | −0.0033 (11) | 0.0418 (13) | −0.0016 (10) |
| C10 | 0.0572 (13) | 0.0459 (13) | 0.0509 (12) | 0.0001 (10) | 0.0318 (11) | 0.0007 (10) |
| C11 | 0.0874 (19) | 0.0469 (14) | 0.0852 (19) | −0.0087 (12) | 0.0561 (16) | 0.0020 (12) |
| O1W—H1W | 0.92 (3) | C3—C4 | 1.368 (4) |
| N1—C7 | 1.362 (3) | C4—C5 | 1.363 (3) |
| N1—C6 | 1.409 (3) | C4—H4A | 0.9300 |
| N1—H1A | 0.88 (3) | C5—C6 | 1.387 (3) |
| O1—C7 | 1.215 (2) | C7—C8 | 1.478 (3) |
| F1—C3 | 1.360 (3) | C8—C10 | 1.363 (3) |
| C1—C2 | 1.384 (3) | C8—C9 | 1.404 (3) |
| C1—C6 | 1.389 (3) | C9—H9A | 0.9300 |
| C1—H1B | 0.9300 | C10—C11 | 1.475 (3) |
| F2—C5 | 1.354 (3) | C11—H11A | 0.9600 |
| O2—C10 | 1.344 (3) | C11—H11B | 0.9600 |
| O2—N2 | 1.406 (3) | C11—H11C | 0.9600 |
| N2—C9 | 1.299 (3) | C11—H11D | 0.9600 |
| C2—C3 | 1.355 (4) | C11—H11E | 0.9600 |
| C2—H2B | 0.9300 | C11—H11F | 0.9600 |
| C7—N1—C6 | 126.79 (19) | C4—C5—C6 | 123.9 (2) |
| C7—N1—H1A | 117.3 (16) | C5—C6—C1 | 116.6 (2) |
| C6—N1—H1A | 115.8 (16) | C5—C6—N1 | 117.51 (19) |
| C2—C1—C6 | 120.6 (2) | C1—C6—N1 | 125.85 (19) |
| C2—C1—H1B | 119.7 | O1—C7—N1 | 123.6 (2) |
| C6—C1—H1B | 119.7 | O1—C7—C8 | 121.66 (19) |
| C10—O2—N2 | 108.88 (17) | N1—C7—C8 | 114.70 (18) |
| C9—N2—O2 | 105.04 (18) | C10—C8—C9 | 103.82 (19) |
| C3—C2—C1 | 119.3 (2) | C10—C8—C7 | 125.4 (2) |
| C3—C2—H2B | 120.4 | C9—C8—C7 | 130.7 (2) |
| C1—C2—H2B | 120.4 | N2—C9—C8 | 112.8 (2) |
| C2—C3—F1 | 119.4 (3) | N2—C9—H9A | 123.6 |
| C2—C3—C4 | 122.8 (2) | C8—C9—H9A | 123.6 |
| F1—C3—C4 | 117.8 (2) | O2—C10—C8 | 109.43 (19) |
| C5—C4—C3 | 116.7 (2) | O2—C10—C11 | 116.39 (19) |
| C5—C4—H4A | 121.6 | C8—C10—C11 | 134.2 (2) |
| C3—C4—H4A | 121.6 | H11D—C11—H11E | 109.5 |
| F2—C5—C4 | 118.5 (2) | H11D—C11—H11F | 109.5 |
| F2—C5—C6 | 117.62 (19) | H11E—C11—H11F | 109.5 |
| C10—O2—N2—C9 | 1.0 (3) | C6—N1—C7—O1 | −3.4 (4) |
| C6—C1—C2—C3 | −0.2 (4) | C6—N1—C7—C8 | 176.0 (2) |
| C1—C2—C3—F1 | −179.4 (3) | O1—C7—C8—C10 | −13.8 (3) |
| C1—C2—C3—C4 | 0.3 (5) | N1—C7—C8—C10 | 166.8 (2) |
| C2—C3—C4—C5 | 0.6 (4) | O1—C7—C8—C9 | 162.3 (2) |
| F1—C3—C4—C5 | −179.7 (3) | N1—C7—C8—C9 | −17.1 (3) |
| C3—C4—C5—F2 | 178.2 (2) | O2—N2—C9—C8 | −0.6 (3) |
| C3—C4—C5—C6 | −1.6 (4) | C10—C8—C9—N2 | 0.0 (3) |
| F2—C5—C6—C1 | −178.2 (2) | C7—C8—C9—N2 | −176.8 (2) |
| C4—C5—C6—C1 | 1.6 (4) | N2—O2—C10—C8 | −1.0 (3) |
| F2—C5—C6—N1 | 1.3 (3) | N2—O2—C10—C11 | 178.9 (2) |
| C4—C5—C6—N1 | −178.9 (2) | C9—C8—C10—O2 | 0.6 (2) |
| C2—C1—C6—C5 | −0.7 (4) | C7—C8—C10—O2 | 177.6 (2) |
| C2—C1—C6—N1 | 179.9 (2) | C9—C8—C10—C11 | −179.2 (3) |
| C7—N1—C6—C5 | −169.5 (2) | C7—C8—C10—C11 | −2.2 (4) |
| C7—N1—C6—C1 | 9.9 (4) |
| H··· | ||||
| N1—H1 | 0.88 (3) | 2.26 (3) | 3.052 (3) | 150 (2) |
| O1 | 0.92 (3) | 2.03 (3) | 2.934 (2) | 167 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.88 (3) | 2.26 (3) | 3.052 (3) | 150 (2) |
| O1 | 0.92 (3) | 2.03 (3) | 2.934 (2) | 167 (3) |
Symmetry code: (i) .