Literature DB >> 22904784

3-Acetyl-1-(2,6-dichloro-phen-yl)thio-urea.

Sharatha Kumar, Sabine Foro, B Thimme Gowda.   

Abstract

In the title compound, C(9)H(8)Cl(2)N(2)OS, the conformation of one of the N-H bonds is anti to the C=S group and the other is anti to the C=O group. Further, the conformations of the amide C=S and the C=O group are anti to each other. The 2,6-dichloro-phenyl ring and the 3-acetyl-thio-urea side chain are inclined to one another at a dihedral angle of 83.44 (5)°. An intra-molecular N-H⋯O hydrogen bond occurs. In the crystal, mol-ecules form inversion dimers through pairs of N-H⋯S hydrogen bonds.

Entities:  

Year:  2012        PMID: 22904784      PMCID: PMC3414177          DOI: 10.1107/S160053681202925X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For studies of the effects of substituents on the structures and other aspects of N-(ar­yl)-amides, see: Bhat & Gowda (2000 ▶); Gowda et al. (2003 ▶); Shahwar et al. (2012 ▶), of N-(ar­yl)-methane­sulfonamides, see: Gowda et al. (2007 ▶) and of N-chloro­aryl­sulfonamides, see: Gowda et al. (2005 ▶); Shetty & Gowda (2004 ▶).

Experimental

Crystal data

C9H8Cl2N2OS M = 263.13 Triclinic, a = 7.729 (1) Å b = 8.047 (1) Å c = 10.015 (1) Å α = 88.05 (1)° β = 76.39 (1)° γ = 66.57 (1)° V = 554.24 (11) Å3 Z = 2 Mo Kα radiation μ = 0.75 mm−1 T = 293 K 0.44 × 0.44 × 0.04 mm

Data collection

Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.735, T max = 0.971 3638 measured reflections 2232 independent reflections 1930 reflections with I > 2σ(I) R int = 0.013

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.095 S = 1.09 2232 reflections 143 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.37 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681202925X/sj5247sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681202925X/sj5247Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681202925X/sj5247Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H8Cl2N2OSZ = 2
Mr = 263.13F(000) = 268
Triclinic, P1Dx = 1.577 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.729 (1) ÅCell parameters from 2085 reflections
b = 8.047 (1) Åθ = 2.8–27.7°
c = 10.015 (1) ŵ = 0.75 mm1
α = 88.05 (1)°T = 293 K
β = 76.39 (1)°Plate, dark yellow
γ = 66.57 (1)°0.44 × 0.44 × 0.04 mm
V = 554.24 (11) Å3
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector2232 independent reflections
Radiation source: fine-focus sealed tube1930 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.013
Rotation method data acquisition using ω and phi scans.θmax = 26.4°, θmin = 2.8°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)h = −9→9
Tmin = 0.735, Tmax = 0.971k = −10→9
3638 measured reflectionsl = −7→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0423P)2 + 0.2588P] where P = (Fo2 + 2Fc2)/3
2232 reflections(Δ/σ)max = 0.005
143 parametersΔρmax = 0.30 e Å3
3 restraintsΔρmin = −0.37 e Å3
Experimental. Absorption correction: CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.0838 (3)0.5813 (3)0.14414 (19)0.0322 (4)
C20.2043 (3)0.5857 (3)0.0189 (2)0.0359 (5)
C30.3407 (3)0.4272 (3)−0.0553 (2)0.0447 (6)
H30.42180.4319−0.13890.054*
C40.3548 (3)0.2629 (3)−0.0042 (3)0.0488 (6)
H40.44660.1563−0.05370.059*
C50.2355 (4)0.2534 (3)0.1192 (3)0.0465 (6)
H50.24490.14160.15250.056*
C60.1012 (3)0.4131 (3)0.1927 (2)0.0374 (5)
C7−0.0252 (3)0.8408 (3)0.30587 (19)0.0300 (4)
C8−0.3676 (3)1.0659 (3)0.3506 (2)0.0356 (5)
C9−0.4980 (3)1.2494 (3)0.4221 (3)0.0524 (6)
H9A−0.45761.33970.37690.079*
H9B−0.49011.24900.51640.079*
H9C−0.62961.27680.41870.079*
N1−0.0603 (2)0.7439 (2)0.21891 (17)0.0342 (4)
H1N−0.175 (3)0.782 (3)0.210 (2)0.041*
N2−0.1818 (2)0.9960 (2)0.36945 (17)0.0349 (4)
H2N−0.156 (3)1.053 (3)0.426 (2)0.042*
O1−0.4216 (2)0.9862 (2)0.28007 (18)0.0530 (5)
Cl10.18527 (10)0.79226 (8)−0.04530 (6)0.05449 (19)
Cl2−0.04629 (11)0.40151 (9)0.34891 (6)0.0607 (2)
S10.19132 (8)0.78798 (8)0.33840 (6)0.04599 (18)
U11U22U33U12U13U23
C10.0283 (9)0.0309 (10)0.0335 (10)−0.0061 (8)−0.0087 (8)−0.0104 (8)
C20.0328 (10)0.0362 (11)0.0355 (10)−0.0091 (9)−0.0099 (8)−0.0045 (8)
C30.0327 (11)0.0510 (14)0.0374 (11)−0.0048 (10)−0.0038 (9)−0.0144 (10)
C40.0393 (12)0.0385 (13)0.0534 (14)0.0040 (10)−0.0152 (11)−0.0198 (11)
C50.0501 (13)0.0290 (11)0.0562 (14)−0.0061 (10)−0.0214 (11)−0.0052 (10)
C60.0375 (11)0.0367 (11)0.0378 (11)−0.0129 (9)−0.0110 (9)−0.0062 (9)
C70.0291 (8)0.0289 (10)0.0276 (9)−0.0089 (8)−0.0025 (7)−0.0048 (8)
C80.0324 (10)0.0336 (11)0.0340 (10)−0.0077 (9)−0.0045 (8)−0.0046 (8)
C90.0411 (13)0.0410 (13)0.0574 (15)0.0012 (10)−0.0084 (11)−0.0153 (11)
N10.0258 (8)0.0321 (9)0.0393 (9)−0.0054 (7)−0.0070 (7)−0.0125 (7)
N20.0315 (9)0.0324 (9)0.0353 (9)−0.0067 (7)−0.0066 (7)−0.0131 (7)
O10.0351 (8)0.0514 (10)0.0654 (11)−0.0058 (7)−0.0162 (8)−0.0201 (8)
Cl10.0596 (4)0.0476 (4)0.0521 (4)−0.0206 (3)−0.0080 (3)0.0075 (3)
Cl20.0744 (5)0.0573 (4)0.0485 (4)−0.0325 (3)−0.0004 (3)0.0009 (3)
S10.0299 (3)0.0539 (4)0.0455 (3)−0.0060 (2)−0.0090 (2)−0.0226 (3)
C1—C21.384 (3)C7—N11.329 (2)
C1—C61.388 (3)C7—N21.385 (2)
C1—N11.424 (2)C7—S11.664 (2)
C2—C31.384 (3)C8—O11.211 (2)
C2—Cl11.725 (2)C8—N21.376 (3)
C3—C41.374 (4)C8—C91.503 (3)
C3—H30.9300C9—H9A0.9600
C4—C51.377 (4)C9—H9B0.9600
C4—H40.9300C9—H9C0.9600
C5—C61.384 (3)N1—H1N0.836 (16)
C5—H50.9300N2—H2N0.845 (16)
C6—Cl21.730 (2)
C2—C1—C6118.15 (18)N1—C7—N2115.94 (17)
C2—C1—N1121.29 (19)N1—C7—S1124.10 (15)
C6—C1—N1120.50 (18)N2—C7—S1119.95 (14)
C1—C2—C3121.2 (2)O1—C8—N2122.41 (18)
C1—C2—Cl1119.41 (15)O1—C8—C9122.4 (2)
C3—C2—Cl1119.43 (18)N2—C8—C9115.21 (18)
C4—C3—C2119.3 (2)C8—C9—H9A109.5
C4—C3—H3120.4C8—C9—H9B109.5
C2—C3—H3120.4H9A—C9—H9B109.5
C3—C4—C5121.1 (2)C8—C9—H9C109.5
C3—C4—H4119.4H9A—C9—H9C109.5
C5—C4—H4119.4H9B—C9—H9C109.5
C4—C5—C6118.8 (2)C7—N1—C1123.48 (17)
C4—C5—H5120.6C7—N1—H1N116.3 (16)
C6—C5—H5120.6C1—N1—H1N120.3 (16)
C5—C6—C1121.4 (2)C8—N2—C7128.23 (17)
C5—C6—Cl2118.92 (18)C8—N2—H2N117.7 (16)
C1—C6—Cl2119.64 (15)C7—N2—H2N114.0 (16)
C6—C1—C2—C3−1.0 (3)N1—C1—C6—C5177.63 (19)
N1—C1—C2—C3−178.23 (18)C2—C1—C6—Cl2179.87 (15)
C6—C1—C2—Cl1179.45 (15)N1—C1—C6—Cl2−2.8 (3)
N1—C1—C2—Cl12.2 (3)N2—C7—N1—C1179.64 (19)
C1—C2—C3—C40.7 (3)S1—C7—N1—C10.7 (3)
Cl1—C2—C3—C4−179.70 (17)C2—C1—N1—C7−86.2 (3)
C2—C3—C4—C50.2 (3)C6—C1—N1—C796.6 (2)
C3—C4—C5—C6−0.8 (3)O1—C8—N2—C76.5 (4)
C4—C5—C6—C10.5 (3)C9—C8—N2—C7−172.7 (2)
C4—C5—C6—Cl2−179.01 (17)N1—C7—N2—C8−2.4 (3)
C2—C1—C6—C50.3 (3)S1—C7—N2—C8176.56 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O10.84 (2)1.94 (2)2.631 (2)139 (2)
N2—H2N···S1i0.85 (2)2.63 (2)3.4252 (17)158 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯O10.84 (2)1.94 (2)2.631 (2)139 (2)
N2—H2N⋯S1i 0.85 (2)2.63 (2)3.4252 (17)158 (2)

Symmetry code: (i) .

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