| Literature DB >> 22904763 |
Abstract
In the title compound, [Co(C(13)H(10)N(4)O(8))(C(5)H(5)Entities:
Year: 2012 PMID: 22904763 PMCID: PMC3414156 DOI: 10.1107/S1600536812029856
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C13H10N4O8)(C5H5N)(H2O)]·C10H8N2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yb | Cell parameters from 2701 reflections |
| θ = 2.6–28.3° | |
| µ = 0.70 mm−1 | |
| β = 91.350 (2)° | Prismatic, red |
| 0.22 × 0.18 × 0.11 mm | |
| Bruker SMART CCD area-detector diffractometer | 3443 independent reflections |
| Radiation source: fine-focus sealed tube | 2633 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 28.3°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 11480 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3443 reflections | (Δ/σ)max < 0.001 |
| 219 parameters | Δρmax = 0.43 e Å−3 |
| 1 restraint | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Co1 | 1.06603 (5) | 0.2500 | 0.45178 (5) | 0.03122 (13) | |
| O1 | 1.1510 (2) | 0.32701 (7) | 0.60553 (18) | 0.0383 (4) | |
| O2 | 1.2252 (2) | 0.43073 (8) | 0.6011 (2) | 0.0522 (5) | |
| O3 | 1.2037 (3) | 0.52310 (8) | 0.4133 (2) | 0.0529 (5) | |
| H3 | 1.2128 | 0.4918 | 0.4734 | 0.079* | |
| O4 | 1.1130 (3) | 0.54174 (8) | 0.1645 (2) | 0.0529 (5) | |
| O5 | 1.3034 (3) | 0.2500 | 0.3543 (3) | 0.0427 (6) | |
| H1W | 1.3294 | 0.2130 | 0.3301 | 0.064* | 0.50 |
| N1 | 1.0110 (2) | 0.33325 (8) | 0.3051 (2) | 0.0333 (4) | |
| N2 | 0.9918 (2) | 0.41425 (8) | 0.1356 (2) | 0.0376 (4) | |
| H2 | 0.9680 | 0.4358 | 0.0494 | 0.045* | |
| N3 | 0.8291 (3) | 0.2500 | 0.5671 (3) | 0.0362 (6) | |
| N4 | 0.5482 (3) | 0.64535 (11) | 0.7813 (3) | 0.0581 (6) | |
| C1 | 1.0812 (3) | 0.38718 (10) | 0.3751 (3) | 0.0323 (5) | |
| C2 | 1.0707 (3) | 0.43808 (10) | 0.2707 (3) | 0.0339 (5) | |
| C3 | 0.9574 (3) | 0.35140 (10) | 0.1597 (3) | 0.0391 (5) | |
| C4 | 1.1577 (3) | 0.38108 (10) | 0.5396 (3) | 0.0352 (5) | |
| C5 | 1.1307 (3) | 0.50565 (11) | 0.2790 (3) | 0.0389 (5) | |
| C6 | 0.8845 (10) | 0.3117 (3) | 0.0277 (8) | 0.077 (2) | 0.755 (8) |
| H6A | 0.9736 | 0.2990 | −0.0432 | 0.092* | 0.755 (8) |
| H6B | 0.8060 | 0.3380 | −0.0347 | 0.092* | 0.755 (8) |
| C7 | 0.7919 (6) | 0.2500 | 0.0846 (6) | 0.0417 (13) | 0.755 (8) |
| H7A | 0.6779 | 0.2500 | 0.0411 | 0.050* | 0.755 (8) |
| H7B | 0.7867 | 0.2500 | 0.2012 | 0.050* | 0.755 (8) |
| C8 | 0.7494 (3) | 0.30506 (12) | 0.6012 (3) | 0.0432 (6) | |
| H8 | 0.8032 | 0.3439 | 0.5807 | 0.052* | |
| C9 | 0.5915 (3) | 0.30676 (14) | 0.6651 (3) | 0.0531 (7) | |
| H9 | 0.5404 | 0.3460 | 0.6869 | 0.064* | |
| C10 | 0.5108 (5) | 0.2500 | 0.6959 (5) | 0.0564 (10) | |
| H10 | 0.4033 | 0.2500 | 0.7371 | 0.068* | |
| C11 | 0.6117 (4) | 0.63819 (13) | 0.9295 (4) | 0.0565 (7) | |
| H11 | 0.6701 | 0.6727 | 0.9751 | 0.068* | |
| C12 | 0.5967 (3) | 0.58259 (12) | 1.0209 (3) | 0.0467 (6) | |
| H12 | 0.6442 | 0.5802 | 1.1241 | 0.056* | |
| C13 | 0.5101 (3) | 0.53088 (11) | 0.9558 (3) | 0.0378 (5) | |
| C14 | 0.4429 (4) | 0.53878 (13) | 0.8010 (4) | 0.0604 (8) | |
| H14 | 0.3829 | 0.5054 | 0.7520 | 0.072* | |
| C15 | 0.4649 (4) | 0.59541 (15) | 0.7211 (4) | 0.0681 (9) | |
| H15 | 0.4183 | 0.5992 | 0.6177 | 0.082* | |
| C7' | 0.9726 (4) | 0.25000 (15) | −0.0032 (4) | 0.048 (4)* | 0.245 (8) |
| H7'1 | 0.9962 | 0.2500 | −0.1173 | 0.057* | 0.245 (8) |
| H7'2 | 1.0762 | 0.2500 | 0.0604 | 0.057* | 0.245 (8) |
| C6' | 0.841 (2) | 0.3086 (7) | 0.049 (2) | 0.034 (3)* | 0.245 (8) |
| H6'1 | 0.8001 | 0.3323 | −0.0446 | 0.041* | 0.245 (8) |
| H6'2 | 0.7470 | 0.2917 | 0.1074 | 0.041* | 0.245 (8) |
| Co1 | 0.0391 (2) | 0.0229 (2) | 0.0313 (2) | 0.000 | −0.00719 (16) | 0.000 |
| O1 | 0.0514 (10) | 0.0286 (8) | 0.0344 (9) | −0.0005 (7) | −0.0105 (7) | −0.0007 (7) |
| O2 | 0.0784 (13) | 0.0338 (9) | 0.0434 (10) | −0.0142 (8) | −0.0229 (9) | −0.0026 (7) |
| O3 | 0.0842 (14) | 0.0277 (9) | 0.0458 (11) | −0.0100 (8) | −0.0171 (9) | −0.0005 (7) |
| O4 | 0.0819 (13) | 0.0294 (9) | 0.0466 (11) | −0.0079 (8) | −0.0133 (9) | 0.0070 (8) |
| O5 | 0.0451 (13) | 0.0284 (11) | 0.0549 (15) | 0.000 | 0.0038 (11) | 0.000 |
| N1 | 0.0417 (10) | 0.0235 (8) | 0.0342 (10) | −0.0004 (7) | −0.0091 (8) | −0.0011 (7) |
| N2 | 0.0518 (11) | 0.0257 (9) | 0.0349 (10) | −0.0025 (8) | −0.0109 (8) | 0.0041 (8) |
| N3 | 0.0409 (15) | 0.0319 (14) | 0.0356 (15) | 0.000 | −0.0052 (11) | 0.000 |
| N4 | 0.0629 (15) | 0.0422 (13) | 0.0696 (17) | 0.0037 (11) | 0.0090 (12) | 0.0145 (11) |
| C1 | 0.0381 (11) | 0.0237 (10) | 0.0349 (12) | 0.0008 (9) | −0.0056 (9) | −0.0030 (8) |
| C2 | 0.0414 (12) | 0.0268 (10) | 0.0333 (12) | 0.0016 (9) | −0.0040 (9) | −0.0017 (9) |
| C3 | 0.0533 (14) | 0.0280 (11) | 0.0354 (13) | −0.0024 (10) | −0.0111 (10) | 0.0007 (9) |
| C4 | 0.0427 (12) | 0.0288 (11) | 0.0336 (12) | 0.0000 (9) | −0.0074 (9) | −0.0031 (9) |
| C5 | 0.0497 (14) | 0.0275 (11) | 0.0394 (13) | −0.0007 (10) | −0.0042 (10) | −0.0029 (10) |
| C6 | 0.127 (6) | 0.053 (3) | 0.049 (3) | −0.053 (3) | −0.024 (4) | 0.005 (2) |
| C7 | 0.049 (3) | 0.033 (2) | 0.042 (3) | 0.000 | −0.020 (2) | 0.000 |
| C8 | 0.0486 (14) | 0.0405 (13) | 0.0402 (14) | 0.0048 (11) | −0.0044 (10) | 0.0007 (11) |
| C9 | 0.0528 (16) | 0.0609 (18) | 0.0456 (15) | 0.0178 (13) | −0.0006 (12) | 0.0010 (13) |
| C10 | 0.043 (2) | 0.084 (3) | 0.042 (2) | 0.000 | −0.0003 (16) | 0.000 |
| C11 | 0.0655 (18) | 0.0355 (14) | 0.069 (2) | −0.0091 (12) | 0.0129 (15) | −0.0069 (13) |
| C12 | 0.0578 (16) | 0.0388 (13) | 0.0433 (14) | −0.0068 (11) | 0.0000 (11) | −0.0039 (11) |
| C13 | 0.0384 (12) | 0.0330 (12) | 0.0419 (13) | −0.0018 (9) | −0.0019 (10) | 0.0015 (10) |
| C14 | 0.076 (2) | 0.0456 (15) | 0.0580 (18) | −0.0175 (14) | −0.0252 (15) | 0.0147 (13) |
| C15 | 0.083 (2) | 0.0592 (19) | 0.061 (2) | −0.0065 (16) | −0.0203 (16) | 0.0207 (16) |
| Co1—O5 | 2.076 (2) | C6—H6A | 0.9700 |
| Co1—N3 | 2.138 (3) | C6—H6B | 0.9700 |
| Co1—O1 | 2.1441 (15) | C7—C6i | 1.557 (6) |
| Co1—O1i | 2.1441 (15) | C7—H7A | 0.9700 |
| Co1—N1i | 2.1515 (17) | C7—H7B | 0.9700 |
| Co1—N1 | 2.1515 (17) | C8—C9 | 1.378 (4) |
| O1—C4 | 1.249 (3) | C8—H8 | 0.9300 |
| O2—C4 | 1.264 (3) | C9—C10 | 1.369 (3) |
| O3—C5 | 1.297 (3) | C9—H9 | 0.9300 |
| O3—H3 | 0.8200 | C10—C9i | 1.369 (3) |
| O4—C5 | 1.215 (3) | C10—H10 | 0.9300 |
| O5—H1W | 0.8200 | C11—C12 | 1.387 (4) |
| N1—C3 | 1.326 (3) | C11—H11 | 0.9300 |
| N1—C1 | 1.374 (3) | C12—C13 | 1.378 (3) |
| N2—C3 | 1.348 (3) | C12—H12 | 0.9300 |
| N2—C2 | 1.366 (3) | C13—C14 | 1.390 (3) |
| N2—H2 | 0.8600 | C13—C13ii | 1.486 (4) |
| N3—C8 | 1.340 (3) | C14—C15 | 1.362 (4) |
| N3—C8i | 1.340 (3) | C14—H14 | 0.9300 |
| N4—C15 | 1.322 (4) | C15—H15 | 0.9300 |
| N4—C11 | 1.327 (4) | C7'—C6'i | 1.667 (13) |
| C1—C2 | 1.367 (3) | C7'—C6' | 1.667 (13) |
| C1—C4 | 1.487 (3) | C7'—H7'1 | 0.9700 |
| C2—C5 | 1.482 (3) | C7'—H7'2 | 0.9700 |
| C3—C6 | 1.478 (6) | C6'—H6'1 | 0.9700 |
| C3—C6' | 1.565 (19) | C6'—H6'2 | 0.9700 |
| C6—C7 | 1.557 (6) | ||
| O5—Co1—N3 | 176.35 (10) | C3—C6—H6A | 108.6 |
| O5—Co1—O1 | 87.35 (7) | C7—C6—H6A | 108.6 |
| N3—Co1—O1 | 90.22 (7) | C3—C6—H6B | 108.6 |
| O5—Co1—O1i | 87.35 (7) | C7—C6—H6B | 108.6 |
| N3—Co1—O1i | 90.22 (7) | H6A—C6—H6B | 107.6 |
| O1—Co1—O1i | 96.30 (8) | C6—C7—C6i | 110.7 (7) |
| O5—Co1—N1i | 87.43 (7) | C6—C7—H7A | 109.5 |
| N3—Co1—N1i | 94.74 (7) | C6i—C7—H7A | 109.5 |
| O1—Co1—N1i | 172.62 (6) | C6—C7—H7B | 109.5 |
| O1i—Co1—N1i | 78.25 (6) | C6i—C7—H7B | 109.5 |
| O5—Co1—N1 | 87.43 (7) | H7A—C7—H7B | 108.1 |
| N3—Co1—N1 | 94.74 (7) | N3—C8—C9 | 123.0 (2) |
| O1—Co1—N1 | 78.25 (6) | N3—C8—H8 | 118.5 |
| O1i—Co1—N1 | 172.62 (6) | C9—C8—H8 | 118.5 |
| N1i—Co1—N1 | 106.72 (9) | C10—C9—C8 | 119.2 (3) |
| C4—O1—Co1 | 115.09 (14) | C10—C9—H9 | 120.4 |
| C5—O3—H3 | 109.5 | C8—C9—H9 | 120.4 |
| Co1—O5—H1W | 109.5 | C9—C10—C9i | 118.7 (4) |
| C3—N1—C1 | 105.87 (18) | C9—C10—H10 | 120.7 |
| C3—N1—Co1 | 143.14 (15) | C9i—C10—H10 | 120.7 |
| C1—N1—Co1 | 109.78 (13) | N4—C11—C12 | 124.3 (3) |
| C3—N2—C2 | 108.63 (18) | N4—C11—H11 | 117.8 |
| C3—N2—H2 | 125.7 | C12—C11—H11 | 117.8 |
| C2—N2—H2 | 125.7 | C13—C12—C11 | 118.8 (3) |
| C8—N3—C8i | 116.9 (3) | C13—C12—H12 | 120.6 |
| C8—N3—Co1 | 121.51 (15) | C11—C12—H12 | 120.6 |
| C8i—N3—Co1 | 121.51 (15) | C12—C13—C14 | 116.7 (2) |
| C15—N4—C11 | 116.1 (2) | C12—C13—C13ii | 122.5 (3) |
| C2—C1—N1 | 110.02 (19) | C14—C13—C13ii | 120.9 (3) |
| C2—C1—C4 | 131.70 (19) | C15—C14—C13 | 120.0 (3) |
| N1—C1—C4 | 118.24 (18) | C15—C14—H14 | 120.0 |
| N2—C2—C1 | 105.15 (18) | C13—C14—H14 | 120.0 |
| N2—C2—C5 | 121.5 (2) | N4—C15—C14 | 124.1 (3) |
| C1—C2—C5 | 133.3 (2) | N4—C15—H15 | 118.0 |
| N1—C3—N2 | 110.33 (19) | C14—C15—H15 | 118.0 |
| N1—C3—C6 | 129.0 (3) | C6'i—C7'—C6' | 93.5 (12) |
| N2—C3—C6 | 120.4 (3) | C6'i—C7'—H7'1 | 113.0 |
| N1—C3—C6' | 123.2 (7) | C6'—C7'—H7'1 | 113.0 |
| N2—C3—C6' | 125.5 (6) | C6'i—C7'—H7'2 | 113.0 |
| C6—C3—C6' | 14.6 (7) | C6'—C7'—H7'2 | 113.0 |
| O1—C4—O2 | 125.2 (2) | H7'1—C7'—H7'2 | 110.4 |
| O1—C4—C1 | 117.23 (18) | C3—C6'—C7' | 101.5 (9) |
| O2—C4—C1 | 117.59 (19) | C3—C6'—H6'1 | 111.5 |
| O4—C5—O3 | 122.8 (2) | C7'—C6'—H6'1 | 111.5 |
| O4—C5—C2 | 121.0 (2) | C3—C6'—H6'2 | 111.5 |
| O3—C5—C2 | 116.2 (2) | C7'—C6'—H6'2 | 111.5 |
| C3—C6—C7 | 114.5 (5) | H6'1—C6'—H6'2 | 109.3 |
| O5—Co1—O1—C4 | 77.25 (17) | C1—N1—C3—C6 | 174.5 (5) |
| N3—Co1—O1—C4 | −105.47 (17) | Co1—N1—C3—C6 | 9.5 (6) |
| O1i—Co1—O1—C4 | 164.28 (13) | C1—N1—C3—C6' | −169.0 (6) |
| N1i—Co1—O1—C4 | 122.3 (5) | Co1—N1—C3—C6' | 26.1 (7) |
| N1—Co1—O1—C4 | −10.68 (16) | C2—N2—C3—N1 | −0.1 (3) |
| O5—Co1—N1—C3 | 86.0 (3) | C2—N2—C3—C6 | −174.9 (4) |
| N3—Co1—N1—C3 | −96.9 (3) | C2—N2—C3—C6' | 168.9 (7) |
| O1—Co1—N1—C3 | 173.8 (3) | Co1—O1—C4—O2 | −169.8 (2) |
| O1i—Co1—N1—C3 | 131.0 (5) | Co1—O1—C4—C1 | 9.7 (3) |
| N1i—Co1—N1—C3 | −0.5 (3) | C2—C1—C4—O1 | −178.4 (2) |
| O5—Co1—N1—C1 | −78.58 (15) | N1—C1—C4—O1 | −1.1 (3) |
| N3—Co1—N1—C1 | 98.49 (15) | C2—C1—C4—O2 | 1.1 (4) |
| O1—Co1—N1—C1 | 9.25 (14) | N1—C1—C4—O2 | 178.5 (2) |
| O1i—Co1—N1—C1 | −33.6 (6) | N2—C2—C5—O4 | −0.9 (4) |
| N1i—Co1—N1—C1 | −165.12 (11) | C1—C2—C5—O4 | 176.1 (2) |
| O5—Co1—N3—C8 | 91.7 (2) | N2—C2—C5—O3 | 180.0 (2) |
| O1—Co1—N3—C8 | 43.6 (2) | C1—C2—C5—O3 | −3.1 (4) |
| O1i—Co1—N3—C8 | 139.9 (2) | N1—C3—C6—C7 | 27.9 (8) |
| N1i—Co1—N3—C8 | −141.9 (2) | N2—C3—C6—C7 | −158.5 (4) |
| N1—Co1—N3—C8 | −34.6 (2) | C6'—C3—C6—C7 | −44 (3) |
| O5—Co1—N3—C8i | −91.7 (2) | C3—C6—C7—C6i | −114.7 (5) |
| O1—Co1—N3—C8i | −139.9 (2) | C8i—N3—C8—C9 | −1.4 (5) |
| O1i—Co1—N3—C8i | −43.6 (2) | Co1—N3—C8—C9 | 175.34 (19) |
| N1i—Co1—N3—C8i | 34.6 (2) | N3—C8—C9—C10 | 0.1 (4) |
| N1—Co1—N3—C8i | 141.9 (2) | C8—C9—C10—C9i | 1.3 (5) |
| C3—N1—C1—C2 | −0.4 (3) | C15—N4—C11—C12 | 0.6 (4) |
| Co1—N1—C1—C2 | 170.09 (15) | N4—C11—C12—C13 | −0.2 (4) |
| C3—N1—C1—C4 | −178.2 (2) | C11—C12—C13—C14 | −0.2 (4) |
| Co1—N1—C1—C4 | −7.8 (2) | C11—C12—C13—C13ii | 179.1 (3) |
| C3—N2—C2—C1 | −0.1 (3) | C12—C13—C14—C15 | 0.3 (4) |
| C3—N2—C2—C5 | 177.6 (2) | C13ii—C13—C14—C15 | −179.0 (3) |
| N1—C1—C2—N2 | 0.3 (2) | C11—N4—C15—C14 | −0.4 (5) |
| C4—C1—C2—N2 | 177.8 (2) | C13—C14—C15—N4 | 0.0 (5) |
| N1—C1—C2—C5 | −177.0 (2) | N1—C3—C6'—C7' | −70.7 (10) |
| C4—C1—C2—C5 | 0.5 (4) | N2—C3—C6'—C7' | 121.7 (6) |
| C1—N1—C3—N2 | 0.3 (3) | C6—C3—C6'—C7' | 48 (2) |
| Co1—N1—C3—N2 | −164.64 (19) | C6'i—C7'—C6'—C3 | 129.0 (6) |
| H··· | ||||
| O3—H3···O2 | 0.82 | 1.65 | 2.473 (2) | 177 |
| O5—H1 | 0.82 | 1.95 | 2.727 (3) | 157 |
| N2—H2···O4iv | 0.86 | 1.93 | 2.763 (3) | 162 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H3⋯O2 | 0.82 | 1.65 | 2.473 (2) | 177 |
| O5—H1 | 0.82 | 1.95 | 2.727 (3) | 157 |
| N2—H2⋯O4ii | 0.86 | 1.93 | 2.763 (3) | 162 |
Symmetry codes: (i) ; (ii) .