| Literature DB >> 22904763 |
Abstract
In the title compound, [Co(C(13)H(10)N(4)O(8))(C(5)H(5)N)(H(2)O)]·C(10)H(8)N(2), the asymmetric unit comprises half a Co(II) complex located on a mirror plane and half a cocrystallized mol-ecule of 4,4'-bipyridine located on an inversion center. The Co(II) ion is six coordinate, with distorted octa-hedral geometry, ligated by two N atoms and two O atoms from a 2,2'-(propane-1,3-di-yl)bis-(5-carboxy-1H-imidazole-4-carboxyl-ate) dianion, one N atom from a pyridine mol-ecule and one coordinating water mol-ecule. The Co-O bond lengths range from 2.076 (2) to 2.1441 (15) Å, while the Co-N bond lengths are 2.138 (3) and 2.1515 (17) Å. A two-dimensional network of N-H⋯O and O-H⋯N hydrogen bonds stabilizes the crystal packing. There are π-π inter-actions between the bipyridine and imidazole rings [centroid-centroid distance = 3.7694 (4) Å]. The propane-1,3-diyl group is disordered over two conformations, with refined occupancies of 0.755 (8) and 0.245 (8).Entities:
Year: 2012 PMID: 22904763 PMCID: PMC3414156 DOI: 10.1107/S1600536812029856
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C13H10N4O8)(C5H5N)(H2O)]·C10H8N2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yb | Cell parameters from 2701 reflections |
| θ = 2.6–28.3° | |
| µ = 0.70 mm−1 | |
| β = 91.350 (2)° | Prismatic, red |
| 0.22 × 0.18 × 0.11 mm | |
| Bruker SMART CCD area-detector diffractometer | 3443 independent reflections |
| Radiation source: fine-focus sealed tube | 2633 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 28.3°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 11480 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3443 reflections | (Δ/σ)max < 0.001 |
| 219 parameters | Δρmax = 0.43 e Å−3 |
| 1 restraint | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Co1 | 1.06603 (5) | 0.2500 | 0.45178 (5) | 0.03122 (13) | |
| O1 | 1.1510 (2) | 0.32701 (7) | 0.60553 (18) | 0.0383 (4) | |
| O2 | 1.2252 (2) | 0.43073 (8) | 0.6011 (2) | 0.0522 (5) | |
| O3 | 1.2037 (3) | 0.52310 (8) | 0.4133 (2) | 0.0529 (5) | |
| H3 | 1.2128 | 0.4918 | 0.4734 | 0.079* | |
| O4 | 1.1130 (3) | 0.54174 (8) | 0.1645 (2) | 0.0529 (5) | |
| O5 | 1.3034 (3) | 0.2500 | 0.3543 (3) | 0.0427 (6) | |
| H1W | 1.3294 | 0.2130 | 0.3301 | 0.064* | 0.50 |
| N1 | 1.0110 (2) | 0.33325 (8) | 0.3051 (2) | 0.0333 (4) | |
| N2 | 0.9918 (2) | 0.41425 (8) | 0.1356 (2) | 0.0376 (4) | |
| H2 | 0.9680 | 0.4358 | 0.0494 | 0.045* | |
| N3 | 0.8291 (3) | 0.2500 | 0.5671 (3) | 0.0362 (6) | |
| N4 | 0.5482 (3) | 0.64535 (11) | 0.7813 (3) | 0.0581 (6) | |
| C1 | 1.0812 (3) | 0.38718 (10) | 0.3751 (3) | 0.0323 (5) | |
| C2 | 1.0707 (3) | 0.43808 (10) | 0.2707 (3) | 0.0339 (5) | |
| C3 | 0.9574 (3) | 0.35140 (10) | 0.1597 (3) | 0.0391 (5) | |
| C4 | 1.1577 (3) | 0.38108 (10) | 0.5396 (3) | 0.0352 (5) | |
| C5 | 1.1307 (3) | 0.50565 (11) | 0.2790 (3) | 0.0389 (5) | |
| C6 | 0.8845 (10) | 0.3117 (3) | 0.0277 (8) | 0.077 (2) | 0.755 (8) |
| H6A | 0.9736 | 0.2990 | −0.0432 | 0.092* | 0.755 (8) |
| H6B | 0.8060 | 0.3380 | −0.0347 | 0.092* | 0.755 (8) |
| C7 | 0.7919 (6) | 0.2500 | 0.0846 (6) | 0.0417 (13) | 0.755 (8) |
| H7A | 0.6779 | 0.2500 | 0.0411 | 0.050* | 0.755 (8) |
| H7B | 0.7867 | 0.2500 | 0.2012 | 0.050* | 0.755 (8) |
| C8 | 0.7494 (3) | 0.30506 (12) | 0.6012 (3) | 0.0432 (6) | |
| H8 | 0.8032 | 0.3439 | 0.5807 | 0.052* | |
| C9 | 0.5915 (3) | 0.30676 (14) | 0.6651 (3) | 0.0531 (7) | |
| H9 | 0.5404 | 0.3460 | 0.6869 | 0.064* | |
| C10 | 0.5108 (5) | 0.2500 | 0.6959 (5) | 0.0564 (10) | |
| H10 | 0.4033 | 0.2500 | 0.7371 | 0.068* | |
| C11 | 0.6117 (4) | 0.63819 (13) | 0.9295 (4) | 0.0565 (7) | |
| H11 | 0.6701 | 0.6727 | 0.9751 | 0.068* | |
| C12 | 0.5967 (3) | 0.58259 (12) | 1.0209 (3) | 0.0467 (6) | |
| H12 | 0.6442 | 0.5802 | 1.1241 | 0.056* | |
| C13 | 0.5101 (3) | 0.53088 (11) | 0.9558 (3) | 0.0378 (5) | |
| C14 | 0.4429 (4) | 0.53878 (13) | 0.8010 (4) | 0.0604 (8) | |
| H14 | 0.3829 | 0.5054 | 0.7520 | 0.072* | |
| C15 | 0.4649 (4) | 0.59541 (15) | 0.7211 (4) | 0.0681 (9) | |
| H15 | 0.4183 | 0.5992 | 0.6177 | 0.082* | |
| C7' | 0.9726 (4) | 0.25000 (15) | −0.0032 (4) | 0.048 (4)* | 0.245 (8) |
| H7'1 | 0.9962 | 0.2500 | −0.1173 | 0.057* | 0.245 (8) |
| H7'2 | 1.0762 | 0.2500 | 0.0604 | 0.057* | 0.245 (8) |
| C6' | 0.841 (2) | 0.3086 (7) | 0.049 (2) | 0.034 (3)* | 0.245 (8) |
| H6'1 | 0.8001 | 0.3323 | −0.0446 | 0.041* | 0.245 (8) |
| H6'2 | 0.7470 | 0.2917 | 0.1074 | 0.041* | 0.245 (8) |
| Co1 | 0.0391 (2) | 0.0229 (2) | 0.0313 (2) | 0.000 | −0.00719 (16) | 0.000 |
| O1 | 0.0514 (10) | 0.0286 (8) | 0.0344 (9) | −0.0005 (7) | −0.0105 (7) | −0.0007 (7) |
| O2 | 0.0784 (13) | 0.0338 (9) | 0.0434 (10) | −0.0142 (8) | −0.0229 (9) | −0.0026 (7) |
| O3 | 0.0842 (14) | 0.0277 (9) | 0.0458 (11) | −0.0100 (8) | −0.0171 (9) | −0.0005 (7) |
| O4 | 0.0819 (13) | 0.0294 (9) | 0.0466 (11) | −0.0079 (8) | −0.0133 (9) | 0.0070 (8) |
| O5 | 0.0451 (13) | 0.0284 (11) | 0.0549 (15) | 0.000 | 0.0038 (11) | 0.000 |
| N1 | 0.0417 (10) | 0.0235 (8) | 0.0342 (10) | −0.0004 (7) | −0.0091 (8) | −0.0011 (7) |
| N2 | 0.0518 (11) | 0.0257 (9) | 0.0349 (10) | −0.0025 (8) | −0.0109 (8) | 0.0041 (8) |
| N3 | 0.0409 (15) | 0.0319 (14) | 0.0356 (15) | 0.000 | −0.0052 (11) | 0.000 |
| N4 | 0.0629 (15) | 0.0422 (13) | 0.0696 (17) | 0.0037 (11) | 0.0090 (12) | 0.0145 (11) |
| C1 | 0.0381 (11) | 0.0237 (10) | 0.0349 (12) | 0.0008 (9) | −0.0056 (9) | −0.0030 (8) |
| C2 | 0.0414 (12) | 0.0268 (10) | 0.0333 (12) | 0.0016 (9) | −0.0040 (9) | −0.0017 (9) |
| C3 | 0.0533 (14) | 0.0280 (11) | 0.0354 (13) | −0.0024 (10) | −0.0111 (10) | 0.0007 (9) |
| C4 | 0.0427 (12) | 0.0288 (11) | 0.0336 (12) | 0.0000 (9) | −0.0074 (9) | −0.0031 (9) |
| C5 | 0.0497 (14) | 0.0275 (11) | 0.0394 (13) | −0.0007 (10) | −0.0042 (10) | −0.0029 (10) |
| C6 | 0.127 (6) | 0.053 (3) | 0.049 (3) | −0.053 (3) | −0.024 (4) | 0.005 (2) |
| C7 | 0.049 (3) | 0.033 (2) | 0.042 (3) | 0.000 | −0.020 (2) | 0.000 |
| C8 | 0.0486 (14) | 0.0405 (13) | 0.0402 (14) | 0.0048 (11) | −0.0044 (10) | 0.0007 (11) |
| C9 | 0.0528 (16) | 0.0609 (18) | 0.0456 (15) | 0.0178 (13) | −0.0006 (12) | 0.0010 (13) |
| C10 | 0.043 (2) | 0.084 (3) | 0.042 (2) | 0.000 | −0.0003 (16) | 0.000 |
| C11 | 0.0655 (18) | 0.0355 (14) | 0.069 (2) | −0.0091 (12) | 0.0129 (15) | −0.0069 (13) |
| C12 | 0.0578 (16) | 0.0388 (13) | 0.0433 (14) | −0.0068 (11) | 0.0000 (11) | −0.0039 (11) |
| C13 | 0.0384 (12) | 0.0330 (12) | 0.0419 (13) | −0.0018 (9) | −0.0019 (10) | 0.0015 (10) |
| C14 | 0.076 (2) | 0.0456 (15) | 0.0580 (18) | −0.0175 (14) | −0.0252 (15) | 0.0147 (13) |
| C15 | 0.083 (2) | 0.0592 (19) | 0.061 (2) | −0.0065 (16) | −0.0203 (16) | 0.0207 (16) |
| Co1—O5 | 2.076 (2) | C6—H6A | 0.9700 |
| Co1—N3 | 2.138 (3) | C6—H6B | 0.9700 |
| Co1—O1 | 2.1441 (15) | C7—C6i | 1.557 (6) |
| Co1—O1i | 2.1441 (15) | C7—H7A | 0.9700 |
| Co1—N1i | 2.1515 (17) | C7—H7B | 0.9700 |
| Co1—N1 | 2.1515 (17) | C8—C9 | 1.378 (4) |
| O1—C4 | 1.249 (3) | C8—H8 | 0.9300 |
| O2—C4 | 1.264 (3) | C9—C10 | 1.369 (3) |
| O3—C5 | 1.297 (3) | C9—H9 | 0.9300 |
| O3—H3 | 0.8200 | C10—C9i | 1.369 (3) |
| O4—C5 | 1.215 (3) | C10—H10 | 0.9300 |
| O5—H1W | 0.8200 | C11—C12 | 1.387 (4) |
| N1—C3 | 1.326 (3) | C11—H11 | 0.9300 |
| N1—C1 | 1.374 (3) | C12—C13 | 1.378 (3) |
| N2—C3 | 1.348 (3) | C12—H12 | 0.9300 |
| N2—C2 | 1.366 (3) | C13—C14 | 1.390 (3) |
| N2—H2 | 0.8600 | C13—C13ii | 1.486 (4) |
| N3—C8 | 1.340 (3) | C14—C15 | 1.362 (4) |
| N3—C8i | 1.340 (3) | C14—H14 | 0.9300 |
| N4—C15 | 1.322 (4) | C15—H15 | 0.9300 |
| N4—C11 | 1.327 (4) | C7'—C6'i | 1.667 (13) |
| C1—C2 | 1.367 (3) | C7'—C6' | 1.667 (13) |
| C1—C4 | 1.487 (3) | C7'—H7'1 | 0.9700 |
| C2—C5 | 1.482 (3) | C7'—H7'2 | 0.9700 |
| C3—C6 | 1.478 (6) | C6'—H6'1 | 0.9700 |
| C3—C6' | 1.565 (19) | C6'—H6'2 | 0.9700 |
| C6—C7 | 1.557 (6) | ||
| O5—Co1—N3 | 176.35 (10) | C3—C6—H6A | 108.6 |
| O5—Co1—O1 | 87.35 (7) | C7—C6—H6A | 108.6 |
| N3—Co1—O1 | 90.22 (7) | C3—C6—H6B | 108.6 |
| O5—Co1—O1i | 87.35 (7) | C7—C6—H6B | 108.6 |
| N3—Co1—O1i | 90.22 (7) | H6A—C6—H6B | 107.6 |
| O1—Co1—O1i | 96.30 (8) | C6—C7—C6i | 110.7 (7) |
| O5—Co1—N1i | 87.43 (7) | C6—C7—H7A | 109.5 |
| N3—Co1—N1i | 94.74 (7) | C6i—C7—H7A | 109.5 |
| O1—Co1—N1i | 172.62 (6) | C6—C7—H7B | 109.5 |
| O1i—Co1—N1i | 78.25 (6) | C6i—C7—H7B | 109.5 |
| O5—Co1—N1 | 87.43 (7) | H7A—C7—H7B | 108.1 |
| N3—Co1—N1 | 94.74 (7) | N3—C8—C9 | 123.0 (2) |
| O1—Co1—N1 | 78.25 (6) | N3—C8—H8 | 118.5 |
| O1i—Co1—N1 | 172.62 (6) | C9—C8—H8 | 118.5 |
| N1i—Co1—N1 | 106.72 (9) | C10—C9—C8 | 119.2 (3) |
| C4—O1—Co1 | 115.09 (14) | C10—C9—H9 | 120.4 |
| C5—O3—H3 | 109.5 | C8—C9—H9 | 120.4 |
| Co1—O5—H1W | 109.5 | C9—C10—C9i | 118.7 (4) |
| C3—N1—C1 | 105.87 (18) | C9—C10—H10 | 120.7 |
| C3—N1—Co1 | 143.14 (15) | C9i—C10—H10 | 120.7 |
| C1—N1—Co1 | 109.78 (13) | N4—C11—C12 | 124.3 (3) |
| C3—N2—C2 | 108.63 (18) | N4—C11—H11 | 117.8 |
| C3—N2—H2 | 125.7 | C12—C11—H11 | 117.8 |
| C2—N2—H2 | 125.7 | C13—C12—C11 | 118.8 (3) |
| C8—N3—C8i | 116.9 (3) | C13—C12—H12 | 120.6 |
| C8—N3—Co1 | 121.51 (15) | C11—C12—H12 | 120.6 |
| C8i—N3—Co1 | 121.51 (15) | C12—C13—C14 | 116.7 (2) |
| C15—N4—C11 | 116.1 (2) | C12—C13—C13ii | 122.5 (3) |
| C2—C1—N1 | 110.02 (19) | C14—C13—C13ii | 120.9 (3) |
| C2—C1—C4 | 131.70 (19) | C15—C14—C13 | 120.0 (3) |
| N1—C1—C4 | 118.24 (18) | C15—C14—H14 | 120.0 |
| N2—C2—C1 | 105.15 (18) | C13—C14—H14 | 120.0 |
| N2—C2—C5 | 121.5 (2) | N4—C15—C14 | 124.1 (3) |
| C1—C2—C5 | 133.3 (2) | N4—C15—H15 | 118.0 |
| N1—C3—N2 | 110.33 (19) | C14—C15—H15 | 118.0 |
| N1—C3—C6 | 129.0 (3) | C6'i—C7'—C6' | 93.5 (12) |
| N2—C3—C6 | 120.4 (3) | C6'i—C7'—H7'1 | 113.0 |
| N1—C3—C6' | 123.2 (7) | C6'—C7'—H7'1 | 113.0 |
| N2—C3—C6' | 125.5 (6) | C6'i—C7'—H7'2 | 113.0 |
| C6—C3—C6' | 14.6 (7) | C6'—C7'—H7'2 | 113.0 |
| O1—C4—O2 | 125.2 (2) | H7'1—C7'—H7'2 | 110.4 |
| O1—C4—C1 | 117.23 (18) | C3—C6'—C7' | 101.5 (9) |
| O2—C4—C1 | 117.59 (19) | C3—C6'—H6'1 | 111.5 |
| O4—C5—O3 | 122.8 (2) | C7'—C6'—H6'1 | 111.5 |
| O4—C5—C2 | 121.0 (2) | C3—C6'—H6'2 | 111.5 |
| O3—C5—C2 | 116.2 (2) | C7'—C6'—H6'2 | 111.5 |
| C3—C6—C7 | 114.5 (5) | H6'1—C6'—H6'2 | 109.3 |
| O5—Co1—O1—C4 | 77.25 (17) | C1—N1—C3—C6 | 174.5 (5) |
| N3—Co1—O1—C4 | −105.47 (17) | Co1—N1—C3—C6 | 9.5 (6) |
| O1i—Co1—O1—C4 | 164.28 (13) | C1—N1—C3—C6' | −169.0 (6) |
| N1i—Co1—O1—C4 | 122.3 (5) | Co1—N1—C3—C6' | 26.1 (7) |
| N1—Co1—O1—C4 | −10.68 (16) | C2—N2—C3—N1 | −0.1 (3) |
| O5—Co1—N1—C3 | 86.0 (3) | C2—N2—C3—C6 | −174.9 (4) |
| N3—Co1—N1—C3 | −96.9 (3) | C2—N2—C3—C6' | 168.9 (7) |
| O1—Co1—N1—C3 | 173.8 (3) | Co1—O1—C4—O2 | −169.8 (2) |
| O1i—Co1—N1—C3 | 131.0 (5) | Co1—O1—C4—C1 | 9.7 (3) |
| N1i—Co1—N1—C3 | −0.5 (3) | C2—C1—C4—O1 | −178.4 (2) |
| O5—Co1—N1—C1 | −78.58 (15) | N1—C1—C4—O1 | −1.1 (3) |
| N3—Co1—N1—C1 | 98.49 (15) | C2—C1—C4—O2 | 1.1 (4) |
| O1—Co1—N1—C1 | 9.25 (14) | N1—C1—C4—O2 | 178.5 (2) |
| O1i—Co1—N1—C1 | −33.6 (6) | N2—C2—C5—O4 | −0.9 (4) |
| N1i—Co1—N1—C1 | −165.12 (11) | C1—C2—C5—O4 | 176.1 (2) |
| O5—Co1—N3—C8 | 91.7 (2) | N2—C2—C5—O3 | 180.0 (2) |
| O1—Co1—N3—C8 | 43.6 (2) | C1—C2—C5—O3 | −3.1 (4) |
| O1i—Co1—N3—C8 | 139.9 (2) | N1—C3—C6—C7 | 27.9 (8) |
| N1i—Co1—N3—C8 | −141.9 (2) | N2—C3—C6—C7 | −158.5 (4) |
| N1—Co1—N3—C8 | −34.6 (2) | C6'—C3—C6—C7 | −44 (3) |
| O5—Co1—N3—C8i | −91.7 (2) | C3—C6—C7—C6i | −114.7 (5) |
| O1—Co1—N3—C8i | −139.9 (2) | C8i—N3—C8—C9 | −1.4 (5) |
| O1i—Co1—N3—C8i | −43.6 (2) | Co1—N3—C8—C9 | 175.34 (19) |
| N1i—Co1—N3—C8i | 34.6 (2) | N3—C8—C9—C10 | 0.1 (4) |
| N1—Co1—N3—C8i | 141.9 (2) | C8—C9—C10—C9i | 1.3 (5) |
| C3—N1—C1—C2 | −0.4 (3) | C15—N4—C11—C12 | 0.6 (4) |
| Co1—N1—C1—C2 | 170.09 (15) | N4—C11—C12—C13 | −0.2 (4) |
| C3—N1—C1—C4 | −178.2 (2) | C11—C12—C13—C14 | −0.2 (4) |
| Co1—N1—C1—C4 | −7.8 (2) | C11—C12—C13—C13ii | 179.1 (3) |
| C3—N2—C2—C1 | −0.1 (3) | C12—C13—C14—C15 | 0.3 (4) |
| C3—N2—C2—C5 | 177.6 (2) | C13ii—C13—C14—C15 | −179.0 (3) |
| N1—C1—C2—N2 | 0.3 (2) | C11—N4—C15—C14 | −0.4 (5) |
| C4—C1—C2—N2 | 177.8 (2) | C13—C14—C15—N4 | 0.0 (5) |
| N1—C1—C2—C5 | −177.0 (2) | N1—C3—C6'—C7' | −70.7 (10) |
| C4—C1—C2—C5 | 0.5 (4) | N2—C3—C6'—C7' | 121.7 (6) |
| C1—N1—C3—N2 | 0.3 (3) | C6—C3—C6'—C7' | 48 (2) |
| Co1—N1—C3—N2 | −164.64 (19) | C6'i—C7'—C6'—C3 | 129.0 (6) |
| H··· | ||||
| O3—H3···O2 | 0.82 | 1.65 | 2.473 (2) | 177 |
| O5—H1 | 0.82 | 1.95 | 2.727 (3) | 157 |
| N2—H2···O4iv | 0.86 | 1.93 | 2.763 (3) | 162 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H3⋯O2 | 0.82 | 1.65 | 2.473 (2) | 177 |
| O5—H1 | 0.82 | 1.95 | 2.727 (3) | 157 |
| N2—H2⋯O4ii | 0.86 | 1.93 | 2.763 (3) | 162 |
Symmetry codes: (i) ; (ii) .