Literature DB >> 22904755

Diaqua-bis-[2,6-bis-(4H-1,2,4-triazol-4-yl)pyridine-κN(2)]bis-(seleno-cyanato-κN)cobalt(II).

Yuan-Yuan Liu1, Pan Yang.   

Abstract

In the title compound, [Co(NCSe)(2)(C(9)H(7)N(7))(2)(H(2)O)(2)], the Co(2+) cation is coordinated by two seleno-cyanate anions, two 2,6-bis-(4H-1,2,4-triazol-4-yl)pyridine ligands and two water mol-ecules within a slightly distorted N(4)O(2) octa-hedron. The asymmetric unit consists of one Co(2+) cation, which is located on a center of inversion, as well as one seleno-cyanate anion, one 2,6-bis-(4H-1,2,4-triazol-4-yl)pyridine ligand and one water mol-ecule in general positions. Inter-molecular O-H⋯N hydrogen bonds join the complex mol-ecules into layers parallel to the bc plane. The layers are linked by C-H⋯N and C-H⋯Se hydrogen bonds into a three-dimensional supra-molecular architecture.

Entities:  

Year:  2012        PMID: 22904755      PMCID: PMC3414148          DOI: 10.1107/S1600536812032461

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to this work, see: Liu et al. (2007 ▶). Previous research on compounds with Co(II) as cation have found a slow relaxation of the magnetization, see: Boeckmann & Näther (2010, ▶ 2011 ▶, 2012) ▶. For related structures, see: Du et al. (2009 ▶); Yang et al. (2008 ▶).

Experimental

Crystal data

[Co(NCSe)2(C9H7N7)2(H2O)2] M = 731.35 Monoclinic, a = 17.5460 (16) Å b = 7.2752 (7) Å c = 20.3148 (19) Å β = 95.691 (2)° V = 2580.4 (4) Å3 Z = 4 Mo Kα radiation μ = 3.54 mm−1 T = 173 K 0.15 × 0.14 × 0.13 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.619, T max = 0.656 6336 measured reflections 2280 independent reflections 2083 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.065 S = 1.05 2280 reflections 186 parameters H-atom parameters constrained Δρmax = 0.59 e Å−3 Δρmin = −0.58 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812032461/zj2088sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032461/zj2088Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(NCSe)2(C9H7N7)2(H2O)2]Z = 4
Mr = 731.35F(000) = 1444
Monoclinic, C2/cDx = 1.883 Mg m3
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 17.5460 (16) ŵ = 3.54 mm1
b = 7.2752 (7) ÅT = 173 K
c = 20.3148 (19) ÅBlock, red
β = 95.691 (2)°0.15 × 0.14 × 0.13 mm
V = 2580.4 (4) Å3
Bruker APEXII CCD diffractometer2280 independent reflections
Radiation source: fine-focus sealed tube2083 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
φ and ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −20→9
Tmin = 0.619, Tmax = 0.656k = −8→8
6336 measured reflectionsl = −23→24
Refinement on F20 restraints
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.026w = 1/[σ2(Fo2) + (0.0325P)2 + 4.1522P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.065(Δ/σ)max = 0.002
S = 1.05Δρmax = 0.59 e Å3
2280 reflectionsΔρmin = −0.58 e Å3
186 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co11.00000.85337 (6)0.25000.01309 (13)
Se11.238743 (15)0.51140 (3)0.329458 (13)0.02053 (11)
O11.08413 (10)1.0675 (2)0.26203 (8)0.0171 (4)
H1A1.11361.05780.23210.026*
H1B1.11161.06230.29830.026*
N11.01232 (11)0.7890 (3)0.04271 (10)0.0134 (4)
N21.08763 (12)0.9006 (3)0.12643 (10)0.0171 (5)
N31.01748 (11)0.8524 (3)0.14815 (10)0.0143 (4)
N40.91149 (11)0.6660 (3)−0.02481 (10)0.0125 (4)
N50.80409 (12)0.5469 (3)−0.08553 (10)0.0136 (4)
N60.69319 (13)0.4701 (3)−0.05234 (12)0.0217 (5)
N70.68675 (13)0.4682 (3)−0.12169 (11)0.0182 (5)
N81.09050 (12)0.6689 (3)0.27341 (10)0.0180 (5)
C11.08281 (14)0.8611 (3)0.06371 (12)0.0156 (5)
H11.12280.87970.03610.019*
C20.97369 (14)0.7874 (3)0.09813 (12)0.0139 (5)
H20.92270.74520.09980.017*
C30.98360 (13)0.7256 (3)−0.02156 (12)0.0114 (5)
C40.88145 (14)0.6091 (3)−0.08405 (12)0.0135 (5)
C50.91929 (15)0.6072 (3)−0.14054 (12)0.0160 (5)
H50.89490.5656−0.18170.019*
C60.99442 (14)0.6689 (3)−0.13447 (12)0.0163 (5)
H61.02260.6702−0.17200.020*
C71.02849 (14)0.7287 (3)−0.07389 (12)0.0150 (5)
H71.08010.7698−0.06850.018*
C80.76306 (16)0.5177 (3)−0.03236 (14)0.0199 (6)
H80.78290.53050.01260.024*
C90.75337 (15)0.5140 (3)−0.13963 (13)0.0171 (6)
H90.76510.5233−0.18420.020*
C101.14850 (15)0.6077 (3)0.29588 (12)0.0167 (5)
U11U22U33U12U13U23
Co10.0104 (2)0.0163 (2)0.0123 (2)0.000−0.00015 (19)0.000
Se10.01776 (16)0.02176 (16)0.02165 (17)0.00585 (11)−0.00019 (12)0.00176 (10)
O10.0126 (8)0.0238 (9)0.0150 (9)−0.0010 (8)0.0014 (7)−0.0007 (7)
N10.0111 (10)0.0154 (10)0.0138 (11)−0.0007 (8)0.0017 (8)−0.0003 (8)
N20.0118 (11)0.0201 (10)0.0192 (12)−0.0021 (9)0.0015 (9)−0.0001 (9)
N30.0113 (10)0.0159 (10)0.0158 (11)−0.0006 (8)0.0020 (9)0.0017 (8)
N40.0110 (10)0.0127 (9)0.0138 (10)0.0004 (8)0.0017 (8)0.0005 (8)
N50.0101 (10)0.0156 (10)0.0150 (11)−0.0016 (8)0.0012 (9)−0.0010 (8)
N60.0156 (11)0.0293 (12)0.0205 (12)−0.0058 (10)0.0033 (10)−0.0008 (10)
N70.0151 (11)0.0208 (11)0.0185 (12)−0.0006 (9)0.0005 (9)−0.0004 (9)
N80.0191 (12)0.0200 (10)0.0151 (11)0.0031 (10)0.0023 (9)−0.0022 (9)
C10.0121 (12)0.0177 (12)0.0171 (13)−0.0028 (10)0.0017 (10)−0.0015 (10)
C20.0122 (11)0.0159 (12)0.0140 (12)−0.0007 (10)0.0032 (10)0.0016 (10)
C30.0105 (11)0.0089 (11)0.0145 (12)0.0003 (9)−0.0002 (10)0.0012 (9)
C40.0106 (12)0.0108 (11)0.0189 (13)−0.0008 (10)0.0007 (10)0.0007 (10)
C50.0182 (13)0.0155 (11)0.0145 (12)−0.0021 (10)0.0021 (10)−0.0032 (10)
C60.0174 (13)0.0181 (12)0.0140 (12)0.0005 (10)0.0055 (10)0.0013 (10)
C70.0104 (11)0.0157 (12)0.0190 (13)0.0000 (10)0.0021 (10)0.0022 (10)
C80.0171 (14)0.0266 (14)0.0161 (14)−0.0047 (11)0.0019 (11)−0.0026 (10)
C90.0157 (13)0.0193 (13)0.0160 (14)−0.0017 (10)0.0002 (11)−0.0005 (10)
C100.0198 (14)0.0157 (12)0.0152 (13)0.0000 (11)0.0052 (11)−0.0036 (10)
Co1—N8i2.097 (2)N5—C81.373 (3)
Co1—N82.097 (2)N5—C41.428 (3)
Co1—N3i2.122 (2)N6—C81.300 (4)
Co1—N32.122 (2)N6—N71.402 (3)
Co1—O12.1434 (18)N7—C91.302 (3)
Co1—O1i2.1433 (17)N8—C101.162 (3)
Se1—C101.803 (3)C1—H10.9500
O1—H1A0.8400C2—H20.9500
O1—H1B0.8400C3—C71.385 (3)
N1—C21.371 (3)C4—C51.382 (3)
N1—C11.372 (3)C5—C61.387 (4)
N1—C31.429 (3)C5—H50.9500
N2—C11.301 (3)C6—C71.384 (3)
N2—N31.393 (3)C6—H60.9500
N3—C21.300 (3)C7—H70.9500
N4—C41.331 (3)C8—H80.9500
N4—C31.333 (3)C9—H90.9500
N5—C91.365 (3)
N8i—Co1—N8100.44 (12)C9—N7—N6107.1 (2)
N8i—Co1—N3i92.26 (8)C10—N8—Co1161.5 (2)
N8—Co1—N3i87.48 (8)N2—C1—N1111.0 (2)
N8i—Co1—N387.48 (8)N2—C1—H1124.5
N8—Co1—N392.26 (8)N1—C1—H1124.5
N3i—Co1—N3179.60 (11)N3—C2—N1109.7 (2)
N8i—Co1—O1171.22 (7)N3—C2—H2125.2
N8—Co1—O186.66 (7)N1—C2—H2125.2
N3i—Co1—O193.20 (7)N4—C3—C7125.2 (2)
N3—Co1—O187.09 (7)N4—C3—N1113.4 (2)
N8i—Co1—O1i86.66 (7)C7—C3—N1121.4 (2)
N8—Co1—O1i171.22 (7)N4—C4—C5125.0 (2)
N3i—Co1—O1i87.09 (7)N4—C4—N5114.1 (2)
N3—Co1—O1i93.20 (7)C5—C4—N5120.9 (2)
O1—Co1—O1i86.76 (9)C4—C5—C6117.0 (2)
Co1—O1—H1A108.8C4—C5—H5121.5
Co1—O1—H1B113.3C6—C5—H5121.5
H1A—O1—H1B106.9C7—C6—C5120.2 (2)
C2—N1—C1104.6 (2)C7—C6—H6119.9
C2—N1—C3126.1 (2)C5—C6—H6119.9
C1—N1—C3129.3 (2)C6—C7—C3116.7 (2)
C1—N2—N3106.3 (2)C6—C7—H7121.6
C2—N3—N2108.43 (19)C3—C7—H7121.6
C2—N3—Co1129.19 (17)N6—C8—N5110.3 (2)
N2—N3—Co1121.72 (15)N6—C8—H8124.8
C4—N4—C3115.8 (2)N5—C8—H8124.8
C9—N5—C8104.8 (2)N7—C9—N5110.6 (2)
C9—N5—C4127.9 (2)N7—C9—H9124.7
C8—N5—C4127.2 (2)N5—C9—H9124.7
C8—N6—N7107.2 (2)N8—C10—Se1179.1 (2)
C1—N2—N3—C2−0.3 (3)C4—N4—C3—C7−1.3 (3)
C1—N2—N3—Co1171.20 (16)C4—N4—C3—N1178.59 (19)
N8i—Co1—N3—C212.0 (2)C2—N1—C3—N42.0 (3)
N8—Co1—N3—C2112.4 (2)C1—N1—C3—N4−179.1 (2)
N3i—Co1—N3—C262.2 (3)C2—N1—C3—C7−178.1 (2)
O1—Co1—N3—C2−161.1 (2)C1—N1—C3—C70.8 (4)
O1i—Co1—N3—C2−74.5 (2)C3—N4—C4—C50.3 (3)
N8i—Co1—N3—N2−157.53 (17)C3—N4—C4—N5−179.81 (19)
N8—Co1—N3—N2−57.18 (17)C9—N5—C4—N4166.4 (2)
N3i—Co1—N3—N2−107.3 (3)C8—N5—C4—N4−9.4 (3)
O1—Co1—N3—N229.36 (17)C9—N5—C4—C5−13.7 (4)
O1i—Co1—N3—N2115.95 (17)C8—N5—C4—C5170.5 (2)
C8—N6—N7—C90.3 (3)N4—C4—C5—C60.3 (4)
N8i—Co1—N8—C10−156.3 (7)N5—C4—C5—C6−179.6 (2)
N3i—Co1—N8—C10−64.4 (6)C4—C5—C6—C70.1 (4)
N3—Co1—N8—C10115.9 (6)C5—C6—C7—C3−0.9 (3)
O1—Co1—N8—C1028.9 (6)N4—C3—C7—C61.6 (4)
O1i—Co1—N8—C10−12.6 (10)N1—C3—C7—C6−178.2 (2)
N3—N2—C1—N10.2 (3)N7—N6—C8—N5−0.3 (3)
C2—N1—C1—N20.0 (3)C9—N5—C8—N60.3 (3)
C3—N1—C1—N2−179.1 (2)C4—N5—C8—N6176.8 (2)
N2—N3—C2—N10.3 (3)N6—N7—C9—N5−0.1 (3)
Co1—N3—C2—N1−170.33 (15)C8—N5—C9—N7−0.1 (3)
C1—N1—C2—N3−0.2 (3)C4—N5—C9—N7−176.6 (2)
C3—N1—C2—N3178.9 (2)Co1—N8—C10—Se1−132 (15)
D—H···AD—HH···AD···AD—H···A
O1—H1A···N20.842.433.017 (3)127
O1—H1B···N7ii0.842.002.837 (3)173
C1—H1···N6iii0.952.373.293 (3)163
C5—H5···N8iv0.952.563.356 (3)142
C7—H7···N6iii0.952.463.373 (3)162
C9—H9···Se1iv0.952.963.877 (3)164
Table 1

Selected bond lengths (Å)

Co1—N82.097 (2)
Co1—N32.122 (2)
Co1—O12.1434 (18)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1A⋯N20.842.433.017 (3)127
O1—H1B⋯N7ii 0.842.002.837 (3)173
C1—H1⋯N6iii 0.952.373.293 (3)163
C5—H5⋯N8iv 0.952.563.356 (3)142
C7—H7⋯N6iii 0.952.463.373 (3)162
C9—H9⋯Se1iv 0.952.963.877 (3)164

Symmetry codes: (ii) ; (iii) ; (iv) .

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