| Literature DB >> 22904745 |
Sadif A Shirvan1, Sara Haydari Dezfuli.
Abstract
In the title mol-ecule, [Cd(Entities:
Year: 2012 PMID: 22904745 PMCID: PMC3414138 DOI: 10.1107/S1600536812031819
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C2H3O2)2(C6H6N2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 8165 reflections | |
| θ = 1.5–26.0° | |
| µ = 1.18 mm−1 | |
| α = 100.837 (6)° | |
| β = 97.994 (6)° | Prism, colorless |
| γ = 114.700 (5)° | 0.48 × 0.38 × 0.30 mm |
| Bruker APEXII CCD area-detector diffractometer | 3758 independent reflections |
| Radiation source: fine-focus sealed tube | 3236 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 26.0°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 8165 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3758 reflections | (Δ/σ)max = 0.010 |
| 252 parameters | Δρmax = 0.64 e Å−3 |
| 2 restraints | Δρmin = −0.96 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.8192 (5) | 0.7991 (5) | 0.9158 (3) | 0.0581 (9) | |
| H1 | 0.8759 | 0.8033 | 0.8639 | 0.070* | |
| C2 | 0.8947 (6) | 0.7893 (6) | 1.0068 (3) | 0.0722 (12) | |
| H2 | 0.9992 | 0.7843 | 1.0152 | 0.087* | |
| C3 | 0.8151 (6) | 0.7869 (7) | 1.0838 (4) | 0.0845 (14) | |
| H3 | 0.8653 | 0.7822 | 1.1460 | 0.101* | |
| C4 | 0.6590 (6) | 0.7916 (7) | 1.0692 (3) | 0.0781 (13) | |
| H4 | 0.6029 | 0.7915 | 1.1213 | 0.094* | |
| C5 | 0.5877 (5) | 0.7965 (5) | 0.9757 (3) | 0.0570 (9) | |
| C6 | 0.4177 (5) | 0.7942 (5) | 0.9549 (3) | 0.0601 (9) | |
| H6A | 0.3628 | 0.8031 | 1.0067 | 0.072* | |
| C7 | 0.3108 (5) | 0.3972 (5) | 0.6895 (3) | 0.0564 (9) | |
| H7 | 0.2298 | 0.4142 | 0.7203 | 0.068* | |
| C8 | 0.2865 (6) | 0.2340 (5) | 0.6552 (3) | 0.0672 (11) | |
| H8 | 0.1925 | 0.1439 | 0.6637 | 0.081* | |
| C9 | 0.4040 (6) | 0.2086 (5) | 0.6088 (4) | 0.0731 (12) | |
| H9 | 0.3917 | 0.1006 | 0.5853 | 0.088* | |
| C10 | 0.5391 (6) | 0.3433 (5) | 0.5972 (3) | 0.0686 (11) | |
| H10 | 0.6188 | 0.3277 | 0.5643 | 0.082* | |
| C11 | 0.5577 (4) | 0.5027 (5) | 0.6342 (3) | 0.0508 (8) | |
| C12 | 0.7043 (5) | 0.6520 (5) | 0.6258 (3) | 0.0649 (11) | |
| H12A | 0.7859 | 0.6391 | 0.5939 | 0.078* | |
| C13 | 0.8125 (7) | 1.3947 (5) | 0.8418 (4) | 0.0858 (14) | |
| H13A | 0.8408 | 1.4150 | 0.9139 | 0.103* | |
| H13B | 0.7162 | 1.4160 | 0.8218 | 0.103* | |
| H13C | 0.9102 | 1.4682 | 0.8214 | 0.103* | |
| C14 | 0.7660 (5) | 1.2150 (5) | 0.7920 (3) | 0.0560 (9) | |
| C15 | 0.0811 (5) | 0.7410 (6) | 0.4978 (3) | 0.0698 (11) | |
| H15A | 0.1029 | 0.6727 | 0.4453 | 0.084* | |
| H15B | 0.1167 | 0.8513 | 0.4882 | 0.084* | |
| H15C | −0.0400 | 0.6904 | 0.4955 | 0.084* | |
| C16 | 0.1808 (5) | 0.7544 (5) | 0.5986 (3) | 0.0540 (9) | |
| N1 | 0.6675 (4) | 0.8026 (4) | 0.8998 (2) | 0.0509 (7) | |
| N2 | 0.3474 (4) | 0.7801 (4) | 0.8656 (2) | 0.0520 (7) | |
| N3 | 0.4438 (3) | 0.5309 (3) | 0.6806 (2) | 0.0459 (6) | |
| N4 | 0.7206 (4) | 0.7966 (4) | 0.6613 (2) | 0.0519 (7) | |
| O1 | 0.1873 (4) | 0.7749 (5) | 0.8529 (2) | 0.0717 (8) | |
| H1B | 0.159 (5) | 0.763 (5) | 0.7912 (10) | 0.058 (12)* | |
| O2 | 0.8603 (4) | 0.9252 (4) | 0.6470 (3) | 0.0863 (10) | |
| H2B | 0.864 (7) | 1.016 (4) | 0.675 (4) | 0.11 (2)* | |
| O3 | 0.6409 (4) | 1.1036 (3) | 0.8110 (2) | 0.0700 (8) | |
| O4 | 0.8568 (4) | 1.1901 (4) | 0.7372 (3) | 0.0850 (9) | |
| O5 | 0.3410 (3) | 0.8162 (4) | 0.6126 (2) | 0.0682 (7) | |
| O6 | 0.0997 (4) | 0.7014 (5) | 0.6609 (2) | 0.0892 (10) | |
| Cd1 | 0.51653 (3) | 0.82333 (3) | 0.745759 (18) | 0.04330 (10) |
| C1 | 0.062 (2) | 0.063 (2) | 0.051 (2) | 0.0298 (19) | 0.0140 (17) | 0.0144 (18) |
| C2 | 0.072 (3) | 0.082 (3) | 0.066 (3) | 0.042 (2) | 0.006 (2) | 0.019 (2) |
| C3 | 0.088 (3) | 0.109 (4) | 0.055 (3) | 0.044 (3) | 0.002 (2) | 0.032 (3) |
| C4 | 0.087 (3) | 0.106 (4) | 0.045 (2) | 0.045 (3) | 0.015 (2) | 0.026 (2) |
| C5 | 0.064 (2) | 0.061 (2) | 0.0416 (19) | 0.0260 (18) | 0.0115 (16) | 0.0115 (17) |
| C6 | 0.066 (2) | 0.073 (3) | 0.046 (2) | 0.032 (2) | 0.0223 (17) | 0.0176 (18) |
| C7 | 0.0511 (19) | 0.058 (2) | 0.054 (2) | 0.0191 (17) | 0.0148 (16) | 0.0152 (18) |
| C8 | 0.069 (2) | 0.054 (2) | 0.064 (3) | 0.0150 (19) | 0.012 (2) | 0.019 (2) |
| C9 | 0.088 (3) | 0.048 (2) | 0.077 (3) | 0.030 (2) | 0.012 (2) | 0.013 (2) |
| C10 | 0.076 (3) | 0.062 (2) | 0.074 (3) | 0.040 (2) | 0.023 (2) | 0.009 (2) |
| C11 | 0.0512 (18) | 0.055 (2) | 0.0488 (19) | 0.0270 (16) | 0.0140 (15) | 0.0122 (16) |
| C12 | 0.060 (2) | 0.071 (3) | 0.074 (3) | 0.034 (2) | 0.036 (2) | 0.018 (2) |
| C13 | 0.098 (3) | 0.047 (2) | 0.095 (4) | 0.020 (2) | 0.022 (3) | 0.010 (2) |
| C14 | 0.065 (2) | 0.053 (2) | 0.045 (2) | 0.0239 (18) | 0.0067 (17) | 0.0140 (17) |
| C15 | 0.062 (2) | 0.092 (3) | 0.059 (2) | 0.038 (2) | 0.0087 (19) | 0.024 (2) |
| C16 | 0.051 (2) | 0.055 (2) | 0.057 (2) | 0.0275 (17) | 0.0068 (16) | 0.0141 (17) |
| N1 | 0.0543 (16) | 0.0539 (17) | 0.0436 (16) | 0.0251 (14) | 0.0106 (13) | 0.0112 (13) |
| N2 | 0.0485 (15) | 0.0629 (19) | 0.0475 (17) | 0.0252 (14) | 0.0201 (13) | 0.0163 (14) |
| N3 | 0.0439 (14) | 0.0479 (16) | 0.0434 (15) | 0.0199 (12) | 0.0110 (11) | 0.0097 (12) |
| N4 | 0.0469 (15) | 0.0542 (17) | 0.0562 (17) | 0.0202 (13) | 0.0243 (13) | 0.0174 (14) |
| O1 | 0.0535 (15) | 0.110 (2) | 0.0619 (19) | 0.0426 (16) | 0.0251 (13) | 0.0259 (18) |
| O2 | 0.0739 (19) | 0.064 (2) | 0.123 (3) | 0.0204 (16) | 0.064 (2) | 0.026 (2) |
| O3 | 0.0821 (19) | 0.0466 (15) | 0.0721 (18) | 0.0207 (14) | 0.0283 (15) | 0.0095 (14) |
| O4 | 0.094 (2) | 0.0665 (19) | 0.092 (2) | 0.0296 (17) | 0.0422 (19) | 0.0197 (18) |
| O5 | 0.0527 (15) | 0.088 (2) | 0.0659 (18) | 0.0314 (14) | 0.0095 (12) | 0.0301 (16) |
| O6 | 0.0664 (18) | 0.136 (3) | 0.0616 (18) | 0.0385 (19) | 0.0151 (15) | 0.038 (2) |
| Cd1 | 0.04362 (14) | 0.04697 (15) | 0.04136 (15) | 0.02141 (11) | 0.01461 (9) | 0.01174 (10) |
| C1—N1 | 1.335 (5) | C12—N4 | 1.254 (5) |
| C1—C2 | 1.379 (6) | C12—H12A | 0.9300 |
| C1—H1 | 0.9300 | C13—C14 | 1.502 (6) |
| C2—C3 | 1.357 (7) | C13—H13A | 0.9600 |
| C2—H2 | 0.9300 | C13—H13B | 0.9600 |
| C3—C4 | 1.378 (7) | C13—H13C | 0.9600 |
| C3—H3 | 0.9300 | C14—O4 | 1.235 (5) |
| C4—C5 | 1.377 (6) | C14—O3 | 1.246 (5) |
| C4—H4 | 0.9300 | C15—C16 | 1.499 (5) |
| C5—N1 | 1.342 (5) | C15—H15A | 0.9600 |
| C5—C6 | 1.472 (5) | C15—H15B | 0.9600 |
| C6—N2 | 1.263 (5) | C15—H15C | 0.9600 |
| C6—H6A | 0.9300 | C16—O6 | 1.237 (5) |
| C7—N3 | 1.330 (5) | C16—O5 | 1.248 (4) |
| C7—C8 | 1.384 (6) | N2—O1 | 1.373 (4) |
| C7—H7 | 0.9300 | N4—O2 | 1.367 (4) |
| C8—C9 | 1.366 (6) | O1—H1B | 0.830 (10) |
| C8—H8 | 0.9300 | O2—H2B | 0.83 (5) |
| C9—C10 | 1.359 (6) | Cd1—N1 | 2.438 (3) |
| C9—H9 | 0.9300 | Cd1—N2 | 2.362 (3) |
| C10—C11 | 1.376 (5) | Cd1—N3 | 2.411 (3) |
| C10—H10 | 0.9300 | Cd1—N4 | 2.344 (3) |
| C11—N3 | 1.346 (4) | Cd1—O3 | 2.245 (3) |
| C11—C12 | 1.468 (6) | Cd1—O5 | 2.210 (3) |
| N1—C1—C2 | 122.3 (4) | O4—C14—C13 | 117.2 (4) |
| N1—C1—H1 | 118.8 | O3—C14—C13 | 117.3 (4) |
| C2—C1—H1 | 118.8 | C16—C15—H15A | 109.5 |
| C3—C2—C1 | 119.3 (4) | C16—C15—H15B | 109.5 |
| C3—C2—H2 | 120.3 | H15A—C15—H15B | 109.5 |
| C1—C2—H2 | 120.3 | C16—C15—H15C | 109.5 |
| C2—C3—C4 | 119.4 (4) | H15A—C15—H15C | 109.5 |
| C2—C3—H3 | 120.3 | H15B—C15—H15C | 109.5 |
| C4—C3—H3 | 120.3 | O6—C16—O5 | 124.8 (4) |
| C5—C4—C3 | 118.6 (4) | O6—C16—C15 | 118.3 (3) |
| C5—C4—H4 | 120.7 | O5—C16—C15 | 116.9 (4) |
| C3—C4—H4 | 120.7 | C1—N1—C5 | 118.0 (3) |
| N1—C5—C4 | 122.4 (4) | C1—N1—Cd1 | 127.0 (2) |
| N1—C5—C6 | 116.9 (3) | C5—N1—Cd1 | 115.0 (2) |
| C4—C5—C6 | 120.7 (4) | C6—N2—O1 | 115.0 (3) |
| N2—C6—C5 | 119.1 (3) | C6—N2—Cd1 | 118.9 (2) |
| N2—C6—H6A | 120.4 | O1—N2—Cd1 | 124.7 (2) |
| C5—C6—H6A | 120.4 | C7—N3—C11 | 117.1 (3) |
| N3—C7—C8 | 123.4 (4) | C7—N3—Cd1 | 127.8 (2) |
| N3—C7—H7 | 118.3 | C11—N3—Cd1 | 115.0 (2) |
| C8—C7—H7 | 118.3 | C12—N4—O2 | 115.3 (3) |
| C9—C8—C7 | 118.3 (4) | C12—N4—Cd1 | 118.4 (2) |
| C9—C8—H8 | 120.8 | O2—N4—Cd1 | 126.3 (2) |
| C7—C8—H8 | 120.8 | N2—O1—H1B | 103 (3) |
| C10—C9—C8 | 119.2 (4) | N4—O2—H2B | 109 (4) |
| C10—C9—H9 | 120.4 | C14—O3—Cd1 | 129.1 (3) |
| C8—C9—H9 | 120.4 | C16—O5—Cd1 | 124.6 (3) |
| C9—C10—C11 | 119.7 (4) | O5—Cd1—O3 | 95.55 (12) |
| C9—C10—H10 | 120.1 | O5—Cd1—N4 | 96.42 (11) |
| C11—C10—H10 | 120.1 | O3—Cd1—N4 | 100.57 (11) |
| N3—C11—C10 | 122.1 (4) | O5—Cd1—N2 | 103.25 (10) |
| N3—C11—C12 | 116.3 (3) | O3—Cd1—N2 | 91.65 (11) |
| C10—C11—C12 | 121.5 (3) | N4—Cd1—N2 | 155.72 (12) |
| N4—C12—C11 | 120.8 (3) | O5—Cd1—N3 | 92.09 (11) |
| N4—C12—H12A | 119.6 | O3—Cd1—N3 | 168.11 (10) |
| C11—C12—H12A | 119.6 | N4—Cd1—N3 | 69.45 (10) |
| C14—C13—H13A | 109.5 | N2—Cd1—N3 | 95.46 (10) |
| C14—C13—H13B | 109.5 | O5—Cd1—N1 | 170.71 (10) |
| H13A—C13—H13B | 109.5 | O3—Cd1—N1 | 89.02 (11) |
| C14—C13—H13C | 109.5 | N4—Cd1—N1 | 90.68 (10) |
| H13A—C13—H13C | 109.5 | N2—Cd1—N1 | 68.45 (10) |
| H13B—C13—H13C | 109.5 | N3—Cd1—N1 | 84.77 (10) |
| O4—C14—O3 | 125.5 (4) | ||
| N1—C1—C2—C3 | −1.5 (7) | C14—O3—Cd1—N3 | 43.8 (7) |
| C1—C2—C3—C4 | 1.0 (8) | C14—O3—Cd1—N1 | 102.2 (4) |
| C2—C3—C4—C5 | 0.8 (8) | C12—N4—Cd1—O5 | −92.2 (3) |
| C3—C4—C5—N1 | −2.3 (7) | O2—N4—Cd1—O5 | 88.5 (3) |
| C3—C4—C5—C6 | 177.3 (4) | C12—N4—Cd1—O3 | 170.9 (3) |
| N1—C5—C6—N2 | 7.4 (6) | O2—N4—Cd1—O3 | −8.4 (3) |
| C4—C5—C6—N2 | −172.3 (4) | C12—N4—Cd1—N2 | 51.9 (4) |
| N3—C7—C8—C9 | −0.9 (6) | O2—N4—Cd1—N2 | −127.4 (4) |
| C7—C8—C9—C10 | −0.4 (7) | C12—N4—Cd1—N3 | −2.4 (3) |
| C8—C9—C10—C11 | 1.4 (7) | O2—N4—Cd1—N3 | 178.3 (4) |
| C9—C10—C11—N3 | −1.2 (7) | C12—N4—Cd1—N1 | 81.8 (3) |
| C9—C10—C11—C12 | 178.3 (4) | O2—N4—Cd1—N1 | −97.5 (3) |
| N3—C11—C12—N4 | 0.6 (6) | C6—N2—Cd1—O5 | −172.9 (3) |
| C10—C11—C12—N4 | −178.9 (4) | O1—N2—Cd1—O5 | −7.2 (3) |
| C2—C1—N1—C5 | 0.1 (6) | C6—N2—Cd1—O3 | −76.8 (3) |
| C2—C1—N1—Cd1 | 179.1 (3) | O1—N2—Cd1—O3 | 88.9 (3) |
| C4—C5—N1—C1 | 1.9 (6) | C6—N2—Cd1—N4 | 43.8 (5) |
| C6—C5—N1—C1 | −177.8 (3) | O1—N2—Cd1—N4 | −150.5 (3) |
| C4—C5—N1—Cd1 | −177.3 (4) | C6—N2—Cd1—N3 | 93.6 (3) |
| C6—C5—N1—Cd1 | 3.0 (4) | O1—N2—Cd1—N3 | −100.7 (3) |
| C5—C6—N2—O1 | 178.4 (3) | C6—N2—Cd1—N1 | 11.5 (3) |
| C5—C6—N2—Cd1 | −14.5 (5) | O1—N2—Cd1—N1 | 177.2 (3) |
| C8—C7—N3—C11 | 1.1 (5) | C7—N3—Cd1—O5 | −84.9 (3) |
| C8—C7—N3—Cd1 | −175.4 (3) | C11—N3—Cd1—O5 | 98.6 (2) |
| C10—C11—N3—C7 | 0.0 (5) | C7—N3—Cd1—O3 | 145.1 (5) |
| C12—C11—N3—C7 | −179.5 (3) | C11—N3—Cd1—O3 | −31.4 (6) |
| C10—C11—N3—Cd1 | 176.9 (3) | C7—N3—Cd1—N4 | 179.1 (3) |
| C12—C11—N3—Cd1 | −2.6 (4) | C11—N3—Cd1—N4 | 2.6 (2) |
| C11—C12—N4—O2 | −178.7 (4) | C7—N3—Cd1—N2 | 18.7 (3) |
| C11—C12—N4—Cd1 | 2.0 (5) | C11—N3—Cd1—N2 | −157.8 (2) |
| O4—C14—O3—Cd1 | −6.0 (6) | C7—N3—Cd1—N1 | 86.4 (3) |
| C13—C14—O3—Cd1 | 175.2 (3) | C11—N3—Cd1—N1 | −90.1 (2) |
| O6—C16—O5—Cd1 | 6.3 (6) | C1—N1—Cd1—O5 | 146.5 (6) |
| C15—C16—O5—Cd1 | −172.3 (3) | C5—N1—Cd1—O5 | −34.4 (7) |
| C16—O5—Cd1—O3 | −111.5 (3) | C1—N1—Cd1—O3 | −93.9 (3) |
| C16—O5—Cd1—N4 | 147.2 (3) | C5—N1—Cd1—O3 | 85.2 (3) |
| C16—O5—Cd1—N2 | −18.5 (3) | C1—N1—Cd1—N4 | 6.7 (3) |
| C16—O5—Cd1—N3 | 77.6 (3) | C5—N1—Cd1—N4 | −174.3 (3) |
| C16—O5—Cd1—N1 | 7.6 (8) | C1—N1—Cd1—N2 | 173.9 (3) |
| C14—O3—Cd1—O5 | −85.9 (4) | C5—N1—Cd1—N2 | −7.0 (3) |
| C14—O3—Cd1—N4 | 11.7 (4) | C1—N1—Cd1—N3 | 76.0 (3) |
| C14—O3—Cd1—N2 | 170.6 (3) | C5—N1—Cd1—N3 | −105.0 (3) |
| H··· | ||||
| O1—H1 | 0.83 (2) | 1.72 (1) | 2.545 (4) | 169 (4) |
| O2—H2 | 0.83 (5) | 1.69 (5) | 2.512 (5) | 175 (6) |
| C6—H6 | 0.93 | 2.52 | 3.381 (5) | 153 |
| C9—H9···O5ii | 0.93 | 2.55 | 3.387 (6) | 151 |
| C12—H12 | 0.93 | 2.56 | 3.264 (6) | 132 |
Selected bond lengths (Å)
| Cd1—N1 | 2.438 (3) |
| Cd1—N2 | 2.362 (3) |
| Cd1—N3 | 2.411 (3) |
| Cd1—N4 | 2.344 (3) |
| Cd1—O3 | 2.245 (3) |
| Cd1—O5 | 2.210 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.83 (2) | 1.72 (1) | 2.545 (4) | 169 (4) |
| O2—H2 | 0.83 (5) | 1.69 (5) | 2.512 (5) | 175 (6) |
| C6—H6 | 0.93 | 2.52 | 3.381 (5) | 153 |
| C9—H9⋯O5ii | 0.93 | 2.55 | 3.387 (6) | 151 |
| C12—H12 | 0.93 | 2.56 | 3.264 (6) | 132 |
Symmetry codes: (i) ; (ii) ; (iii) .