Literature DB >> 22904730

Diiodido[methyl 2-(quinolin-8-yl-oxy)-acetate-κN]mercury(II).

Yu-Hong Wang1, Qin Zhong, Rui-Feng Song.   

Abstract

In the title mononuclear complex, [HgI(2)(C(12)H(11)NO(3))], the Hg(II) ion has a distorted trigonal-planar coordination sphere defined by two I(-) anions and the N atom of a methyl 2-(quinolin-8-yl-oxy)acetate ligand. In the crystal, face-to-face π-π stacking inter-actions, with a centroid-centroid distance of 3.563 (9) Å, are observed.

Entities:  

Year:  2012        PMID: 22904730      PMCID: PMC3414123          DOI: 10.1107/S1600536812031017

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For derivatives of quinoline, see: Cheng et al. (2007 ▶); Ghedini et al. (2002 ▶); Inomata et al. (1999 ▶); Jotterand et al. (2001 ▶). For transition metal coordination compounds of 8-quinolinyloxy­acetic acid, see: Cheng et al. (2007 ▶); Song et al. (2004 ▶); Wang et al. (2005 ▶, 2008 ▶).

Experimental

Crystal data

[HgI2(C12H11NO3)] M = 671.61 Triclinic, a = 7.5889 (5) Å b = 10.3670 (7) Å c = 11.4241 (11) Å α = 72.203 (18)° β = 74.40 (2)° γ = 68.644 (19)° V = 784.33 (15) Å3 Z = 2 Mo Kα radiation μ = 13.75 mm−1 T = 223 K 0.30 × 0.15 × 0.12 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.095, T max = 0.191 6692 measured reflections 2912 independent reflections 2068 reflections with I > 2σ(I) R int = 0.075

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.104 S = 1.08 2912 reflections 127 parameters H-atom parameters constrained Δρmax = 1.74 e Å−3 Δρmin = −2.02 e Å−3 Data collection: CrystalClear (Rigaku, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812031017/rz2782sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031017/rz2782Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgI2(C12H11NO3)]Z = 2
Mr = 671.61F(000) = 600
Triclinic, P1Dx = 2.844 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71075 Å
a = 7.5889 (5) ÅCell parameters from 3945 reflections
b = 10.3670 (7) Åθ = 3.0–27.5°
c = 11.4241 (11) ŵ = 13.75 mm1
α = 72.203 (18)°T = 223 K
β = 74.40 (2)°Block, colourless
γ = 68.644 (19)°0.30 × 0.15 × 0.12 mm
V = 784.33 (15) Å3
Rigaku Saturn diffractometer2912 independent reflections
Radiation source: fine-focus sealed tube2068 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.075
Detector resolution: 14.63 pixels mm-1θmax = 25.5°, θmin = 3.0°
ω scansh = −9→9
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −11→12
Tmin = 0.095, Tmax = 0.191l = −13→11
6692 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.104w = 1/[σ2(Fo2) + (0.0218P)2] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
2912 reflectionsΔρmax = 1.74 e Å3
127 parametersΔρmin = −2.02 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0122 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.51208 (7)0.82132 (6)0.69012 (5)0.0363 (2)
I10.20950 (11)0.98926 (10)0.59179 (9)0.0367 (3)
I20.79754 (12)0.77753 (11)0.80042 (9)0.0407 (3)
O10.4074 (12)0.5817 (10)0.8269 (8)0.036 (2)
O20.2395 (13)0.8117 (11)0.9230 (9)0.044 (3)
O30.0431 (12)0.7026 (11)1.0766 (9)0.044 (3)
N10.6241 (13)0.6124 (11)0.5978 (11)0.032 (3)
C10.7266 (17)0.6246 (15)0.4837 (13)0.0351 (11)
H10.73880.71480.44040.042*
C20.8204 (17)0.5104 (14)0.4210 (13)0.0351 (11)
H20.89160.52590.33960.042*
C30.8046 (17)0.3814 (15)0.4808 (13)0.0351 (11)
H30.86400.30530.44090.042*
C40.6940 (18)0.3573 (15)0.6095 (13)0.0351 (11)
C50.6720 (17)0.2266 (15)0.6712 (13)0.0351 (11)
H50.73040.14890.63340.042*
C60.5686 (17)0.2116 (15)0.7835 (13)0.0351 (11)
H60.55650.12120.82610.042*
C70.4726 (17)0.3280 (14)0.8446 (13)0.0351 (11)
H70.39900.31590.92550.042*
C80.4950 (18)0.4584 (15)0.7775 (13)0.0351 (11)
C90.6036 (18)0.4816 (15)0.6632 (13)0.0351 (11)
C100.2660 (17)0.5716 (16)0.9448 (14)0.041 (4)
H10A0.16360.54160.93460.050*
H10B0.32950.50011.01190.050*
C110.1829 (19)0.7104 (17)0.9780 (15)0.040 (4)
C12−0.052 (2)0.8306 (17)1.1242 (14)0.056 (5)
H12A0.03730.84821.15980.083*
H12B−0.16210.81811.18810.083*
H12C−0.09460.91091.05650.083*
U11U22U33U12U13U23
Hg10.0374 (3)0.0355 (4)0.0358 (4)−0.0110 (2)−0.0080 (2)−0.0067 (3)
I10.0336 (5)0.0352 (6)0.0399 (6)−0.0105 (4)−0.0073 (4)−0.0065 (5)
I20.0408 (5)0.0497 (7)0.0322 (6)−0.0198 (4)−0.0088 (4)−0.0011 (5)
O10.045 (5)0.034 (6)0.026 (6)−0.013 (4)0.013 (4)−0.018 (5)
O20.052 (6)0.045 (7)0.036 (7)−0.019 (5)0.012 (5)−0.019 (6)
O30.046 (5)0.055 (7)0.028 (6)−0.022 (5)0.017 (4)−0.017 (6)
N10.030 (6)0.018 (6)0.050 (8)−0.005 (5)−0.011 (5)−0.010 (6)
C10.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C20.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C30.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C40.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C50.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C60.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C70.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C80.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C90.038 (2)0.032 (3)0.032 (3)−0.011 (2)−0.0028 (19)−0.005 (2)
C100.033 (7)0.053 (10)0.033 (9)−0.024 (7)−0.010 (6)0.014 (8)
C110.041 (8)0.038 (9)0.040 (10)−0.018 (7)−0.016 (7)0.007 (8)
C120.068 (10)0.064 (12)0.029 (10)−0.024 (9)0.029 (8)−0.030 (9)
Hg1—N12.470 (9)C4—C51.371 (19)
Hg1—I12.6163 (12)C4—C91.456 (17)
Hg1—I22.6246 (11)C5—C61.308 (18)
O1—C81.419 (14)C5—H50.9400
O1—C101.482 (15)C6—C71.441 (16)
O2—C111.209 (17)C6—H60.9400
O3—C111.328 (17)C7—C81.381 (19)
O3—C121.452 (15)C7—H70.9400
N1—C11.321 (17)C8—C91.348 (19)
N1—C91.377 (17)C10—C111.469 (19)
C1—C21.432 (16)C10—H10A0.9800
C1—H10.9400C10—H10B0.9800
C2—C31.336 (19)C12—H12A0.9700
C2—H20.9400C12—H12B0.9700
C3—C41.481 (19)C12—H12C0.9700
C3—H30.9400
N1—Hg1—I1104.4 (2)C7—C6—H6118.7
N1—Hg1—I2102.2 (2)C8—C7—C6116.1 (13)
I1—Hg1—I2151.47 (4)C8—C7—H7121.9
C8—O1—C10117.4 (10)C6—C7—H7121.9
C11—O3—C12116.1 (11)C9—C8—C7124.7 (12)
C1—N1—C9118.9 (10)C9—C8—O1113.5 (12)
C1—N1—Hg1117.2 (9)C7—C8—O1121.7 (12)
C9—N1—Hg1123.5 (9)C8—C9—N1123.9 (12)
N1—C1—C2124.8 (13)C8—C9—C4114.8 (13)
N1—C1—H1117.6N1—C9—C4121.2 (12)
C2—C1—H1117.6C11—C10—O1109.9 (12)
C3—C2—C1118.5 (13)C11—C10—H10A109.7
C3—C2—H2120.7O1—C10—H10A109.7
C1—C2—H2120.7C11—C10—H10B109.7
C2—C3—C4120.5 (12)O1—C10—H10B109.7
C2—C3—H3119.8H10A—C10—H10B108.2
C4—C3—H3119.8O2—C11—O3127.6 (13)
C5—C4—C9122.5 (13)O2—C11—C10123.5 (13)
C5—C4—C3121.4 (11)O3—C11—C10108.8 (13)
C9—C4—C3116.1 (12)O3—C12—H12A109.5
C6—C5—C4119.1 (12)O3—C12—H12B109.5
C6—C5—H5120.4H12A—C12—H12B109.5
C4—C5—H5120.4O3—C12—H12C109.5
C5—C6—C7122.6 (14)H12A—C12—H12C109.5
C5—C6—H6118.7H12B—C12—H12C109.5
I1—Hg1—N1—C180.1 (9)C7—C8—C9—N1−180.0 (12)
I2—Hg1—N1—C1−89.5 (9)O1—C8—C9—N1−1.9 (19)
I1—Hg1—N1—C9−107.3 (9)C7—C8—C9—C42 (2)
I2—Hg1—N1—C983.1 (9)O1—C8—C9—C4−179.4 (10)
C9—N1—C1—C2−0.1 (19)C1—N1—C9—C8−176.7 (13)
Hg1—N1—C1—C2172.9 (9)Hg1—N1—C9—C810.8 (18)
N1—C1—C2—C30 (2)C1—N1—C9—C40.7 (18)
C1—C2—C3—C4−0.7 (19)Hg1—N1—C9—C4−171.9 (8)
C2—C3—C4—C5178.3 (13)C5—C4—C9—C8−0.7 (19)
C2—C3—C4—C91.2 (18)C3—C4—C9—C8176.4 (12)
C9—C4—C5—C6−1 (2)C5—C4—C9—N1−178.3 (12)
C3—C4—C5—C6−178.1 (12)C3—C4—C9—N1−1.2 (18)
C4—C5—C6—C71 (2)C8—O1—C10—C11−177.0 (10)
C5—C6—C7—C80.2 (19)C12—O3—C11—O20 (2)
C6—C7—C8—C9−2 (2)C12—O3—C11—C10178.5 (11)
C6—C7—C8—O1179.8 (10)O1—C10—C11—O2−7.3 (19)
C10—O1—C8—C9172.5 (11)O1—C10—C11—O3173.7 (10)
C10—O1—C8—C7−9.4 (17)
  4 in total

1.  Asymmetric synthesis of a new 8-hydroxyquinoline-derived alpha-amino acid and its incorporation in a peptidylsensor for divalent zinc.

Authors:  N Jotterand; D A Pearce; B Imperiali
Journal:  J Org Chem       Date:  2001-05-04       Impact factor: 4.354

2.  Single crystal-to-single crystal transformation from ferromagnetic discrete molecules to a spin-canting antiferromagnetic layer.

Authors:  Xiao-Ning Cheng; Wei-Xiong Zhang; Xiao-Ming Chen
Journal:  J Am Chem Soc       Date:  2007-11-29       Impact factor: 15.419

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Di-μ-chlorido-bis-{[2-(8-quinol-yloxy)-acetato-κN,O,O]copper(II)}.

Authors:  Zhi-Hong Wang; Jun Fan; Wei-Guang Zhang; Jun Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-18
  4 in total

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