| Literature DB >> 22904717 |
Abstract
The structure of the title compound, [Zn(CH(3)COO)(2)(C(8)H(12)N(2))(2)], has one half molecule in the asymmetric unit. The Zn(II) atom is situated on a twofold rotation axis and is tetrahedrally coordinated by two N and two O atoms. The crystal packing displays inter-molecular N-H⋯O hydrogen bonds and intra-molecular N-H⋯O and N-H⋯N hydrogen bonding.Entities:
Year: 2012 PMID: 22904717 PMCID: PMC3414110 DOI: 10.1107/S160053681203036X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C2H3O2)2(C8H12N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C2yc | Cell parameters from 5876 reflections |
| θ = 2.7–25.0° | |
| µ = 1.12 mm−1 | |
| β = 92.284 (4)° | Plate, colourless |
| 0.80 × 0.30 × 0.20 mm | |
| Bruker SMART X2S benchtop diffractometer | 1986 independent reflections |
| Radiation source: fine-focus sealed tube | 1905 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 25.0°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 11403 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1986 reflections | (Δ/σ)max < 0.001 |
| 151 parameters | Δρmax = 0.67 e Å−3 |
| 0 restraints | Δρmin = −0.37 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.5000 | 0.21781 (8) | 0.2500 | 0.02608 (16) | |
| O1 | 0.53194 (10) | 0.4948 (4) | 0.30352 (6) | 0.0343 (4) | |
| O2 | 0.60458 (11) | 0.1492 (4) | 0.33024 (7) | 0.0421 (5) | |
| N1 | 0.56934 (12) | −0.0427 (5) | 0.21196 (8) | 0.0281 (5) | |
| N2 | 0.69849 (13) | 0.2531 (6) | 0.23902 (9) | 0.0360 (6) | |
| C1 | 0.60972 (12) | 0.0974 (5) | 0.17273 (9) | 0.0262 (5) | |
| C2 | 0.67121 (13) | 0.2524 (5) | 0.18723 (10) | 0.0279 (6) | |
| C3 | 0.70681 (14) | 0.3968 (6) | 0.14856 (10) | 0.0344 (6) | |
| H3 | 0.7496 | 0.4999 | 0.1579 | 0.041* | |
| C4 | 0.68215 (14) | 0.3954 (7) | 0.09706 (10) | 0.0364 (6) | |
| C5 | 0.61975 (15) | 0.2423 (7) | 0.08302 (10) | 0.0383 (7) | |
| C6 | 0.58503 (14) | 0.0931 (7) | 0.12132 (10) | 0.0351 (6) | |
| H6 | 0.5431 | −0.0149 | 0.1119 | 0.042* | |
| C7 | 0.5892 (2) | 0.2368 (9) | 0.02749 (12) | 0.0659 (12) | |
| H7A | 0.5444 | 0.1254 | 0.0258 | 0.099* | |
| H7B | 0.6248 | 0.1515 | 0.0049 | 0.099* | |
| H7C | 0.5787 | 0.4298 | 0.0159 | 0.099* | |
| C8 | 0.72326 (19) | 0.5613 (8) | 0.05768 (12) | 0.0553 (9) | |
| H8A | 0.7708 | 0.6160 | 0.0729 | 0.083* | |
| H8B | 0.6957 | 0.7310 | 0.0478 | 0.083* | |
| H8C | 0.7300 | 0.4446 | 0.0268 | 0.083* | |
| C9 | 0.57583 (14) | 0.3768 (6) | 0.33792 (9) | 0.0308 (6) | |
| C10 | 0.58890 (18) | 0.5363 (7) | 0.38778 (11) | 0.0488 (8) | |
| H10A | 0.6249 | 0.4360 | 0.4099 | 0.073* | |
| H10B | 0.5433 | 0.5516 | 0.4059 | 0.073* | |
| H10C | 0.6070 | 0.7256 | 0.3801 | 0.073* | |
| H1A | 0.5413 (19) | −0.167 (7) | 0.1990 (12) | 0.045 (9)* | |
| H1B | 0.5973 (17) | −0.120 (7) | 0.2345 (12) | 0.039 (8)* | |
| H2A | 0.6658 (18) | 0.234 (6) | 0.2628 (12) | 0.039 (9)* | |
| H2B | 0.7263 (18) | 0.383 (8) | 0.2448 (12) | 0.042 (9)* |
| Zn1 | 0.0257 (2) | 0.0218 (2) | 0.0310 (2) | 0.000 | 0.00465 (15) | 0.000 |
| O1 | 0.0391 (10) | 0.0294 (10) | 0.0338 (9) | 0.0044 (8) | −0.0066 (7) | −0.0022 (8) |
| O2 | 0.0462 (12) | 0.0404 (13) | 0.0398 (10) | 0.0137 (10) | 0.0034 (8) | 0.0026 (9) |
| N1 | 0.0235 (10) | 0.0279 (13) | 0.0330 (11) | −0.0022 (10) | 0.0030 (9) | 0.0003 (9) |
| N2 | 0.0251 (11) | 0.0492 (17) | 0.0336 (12) | −0.0046 (11) | −0.0011 (10) | 0.0021 (10) |
| C1 | 0.0210 (11) | 0.0258 (13) | 0.0323 (12) | 0.0021 (10) | 0.0053 (9) | −0.0003 (10) |
| C2 | 0.0213 (12) | 0.0306 (15) | 0.0319 (12) | 0.0030 (10) | 0.0022 (9) | −0.0002 (10) |
| C3 | 0.0232 (12) | 0.0393 (16) | 0.0410 (14) | −0.0057 (12) | 0.0055 (10) | −0.0013 (12) |
| C4 | 0.0315 (14) | 0.0424 (17) | 0.0360 (13) | 0.0002 (13) | 0.0101 (11) | 0.0045 (12) |
| C5 | 0.0327 (14) | 0.0525 (19) | 0.0297 (13) | −0.0007 (13) | 0.0026 (11) | 0.0009 (12) |
| C6 | 0.0260 (13) | 0.0440 (17) | 0.0355 (13) | −0.0073 (12) | 0.0033 (10) | −0.0067 (12) |
| C7 | 0.053 (2) | 0.110 (4) | 0.0338 (16) | −0.014 (2) | −0.0010 (14) | 0.0017 (18) |
| C8 | 0.0550 (19) | 0.066 (2) | 0.0455 (17) | −0.0125 (18) | 0.0163 (14) | 0.0110 (16) |
| C9 | 0.0298 (13) | 0.0311 (15) | 0.0314 (12) | −0.0015 (11) | 0.0017 (10) | 0.0037 (11) |
| C10 | 0.066 (2) | 0.0427 (19) | 0.0368 (15) | 0.0084 (16) | −0.0131 (14) | −0.0038 (13) |
| Zn1—O1 | 1.9759 (18) | C3—H3 | 0.9500 |
| Zn1—O1i | 1.9759 (18) | C4—C5 | 1.395 (4) |
| Zn1—N1 | 2.054 (2) | C4—C8 | 1.511 (4) |
| Zn1—N1i | 2.054 (2) | C5—C6 | 1.390 (4) |
| O1—C9 | 1.302 (3) | C5—C7 | 1.516 (4) |
| O2—C9 | 1.222 (3) | C6—H6 | 0.9500 |
| N1—C1 | 1.441 (3) | C7—H7A | 0.9800 |
| N1—H1A | 0.84 (4) | C7—H7B | 0.9800 |
| N1—H1B | 0.84 (3) | C7—H7C | 0.9800 |
| N2—C2 | 1.406 (3) | C8—H8A | 0.9800 |
| N2—H2A | 0.88 (3) | C8—H8B | 0.9800 |
| N2—H2B | 0.81 (4) | C8—H8C | 0.9800 |
| C1—C6 | 1.382 (3) | C9—C10 | 1.501 (4) |
| C1—C2 | 1.389 (4) | C10—H10A | 0.9800 |
| C2—C3 | 1.394 (4) | C10—H10B | 0.9800 |
| C3—C4 | 1.384 (4) | C10—H10C | 0.9800 |
| O1—Zn1—O1i | 96.70 (10) | C6—C5—C4 | 118.6 (2) |
| O1—Zn1—N1 | 123.94 (8) | C6—C5—C7 | 119.7 (3) |
| O1i—Zn1—N1 | 103.95 (8) | C4—C5—C7 | 121.7 (3) |
| O1—Zn1—N1i | 103.95 (8) | C1—C6—C5 | 121.9 (2) |
| O1i—Zn1—N1i | 123.94 (8) | C1—C6—H6 | 119.1 |
| N1—Zn1—N1i | 106.06 (13) | C5—C6—H6 | 119.1 |
| C9—O1—Zn1 | 110.40 (17) | C5—C7—H7A | 109.5 |
| C1—N1—Zn1 | 113.93 (17) | C5—C7—H7B | 109.5 |
| C1—N1—H1A | 112 (2) | H7A—C7—H7B | 109.5 |
| Zn1—N1—H1A | 103 (2) | C5—C7—H7C | 109.5 |
| C1—N1—H1B | 111 (2) | H7A—C7—H7C | 109.5 |
| Zn1—N1—H1B | 108 (2) | H7B—C7—H7C | 109.5 |
| H1A—N1—H1B | 109 (3) | C4—C8—H8A | 109.5 |
| C2—N2—H2A | 115 (2) | C4—C8—H8B | 109.5 |
| C2—N2—H2B | 112 (2) | H8A—C8—H8B | 109.5 |
| H2A—N2—H2B | 113 (3) | C4—C8—H8C | 109.5 |
| C6—C1—C2 | 119.9 (2) | H8A—C8—H8C | 109.5 |
| C6—C1—N1 | 120.3 (2) | H8B—C8—H8C | 109.5 |
| C2—C1—N1 | 119.6 (2) | O2—C9—O1 | 122.1 (2) |
| C1—C2—C3 | 118.1 (2) | O2—C9—C10 | 121.8 (2) |
| C1—C2—N2 | 120.9 (2) | O1—C9—C10 | 116.1 (2) |
| C3—C2—N2 | 121.0 (2) | C9—C10—H10A | 109.5 |
| C4—C3—C2 | 122.4 (2) | C9—C10—H10B | 109.5 |
| C4—C3—H3 | 118.8 | H10A—C10—H10B | 109.5 |
| C2—C3—H3 | 118.8 | C9—C10—H10C | 109.5 |
| C3—C4—C5 | 119.1 (2) | H10A—C10—H10C | 109.5 |
| C3—C4—C8 | 119.1 (3) | H10B—C10—H10C | 109.5 |
| C5—C4—C8 | 121.8 (3) |
| H··· | ||||
| N1—H1 | 0.84 (4) | 2.10 (4) | 2.897 (3) | 158 (3) |
| N2—H2 | 0.88 (3) | 2.15 (3) | 3.013 (3) | 168 (3) |
| N2—H2 | 0.81 (4) | 2.26 (4) | 3.076 (3) | 179 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.84 (4) | 2.10 (4) | 2.897 (3) | 158 (3) |
| N2—H2 | 0.88 (3) | 2.15 (3) | 3.013 (3) | 168 (3) |
| N2—H2 | 0.81 (4) | 2.26 (4) | 3.076 (3) | 179 (3) |
Symmetry codes: (i) ; (ii) .