Literature DB >> 22904227

Polaribacter porphyrae sp. nov., isolated from the red alga Porphyra yezoensis, and emended descriptions of the genus Polaribacter and two Polaribacter species.

Youhei Fukui1, Mahiko Abe2, Masahiro Kobayashi3, Hiroaki Saito1, Hiroshi Oikawa4, Yutaka Yano5, Masataka Satomi1.   

Abstract

Three Gram-negative, non-motile, strictly aerobic strains, designated LNM-20(T), LCM-1 and LAM-13, were isolated from thalli of the marine red alga Porphyra yezoensis. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolates were associated with the genus Polaribacter in the family Flavobacteriaceae and were most closely related to Polaribacter dokdonensis DSW-5(T) (96.2 % 16S rRNA gene sequence similarity) and Polaribacter gangjinensis K17-16(T) (95.0 %). The DNA G+C content of the isolates was 28.6-29.2 mol%. DNA-DNA hybridization analysis showed that the isolates belonged to a single species distinct from both of their closest relatives. The only isoprenoid quinone detected was menaquinone-6. The main polar lipids were phosphatidylethanolamine, two unidentified aminolipids and two unidentified lipids. The major fatty acids were iso-C15 : 0, iso-C15 : 1ω10c and iso-C15 : 0 3-OH. The phenotypic features of strain LNM-20(T) differed from those of their closest relatives in several regards (colony colour, growth with 1 % NaCl and on TSA plus 2.5 % NaCl, hydrolysis of Tweens 40 and 80, and oxidization of five carbon compounds). On the basis of phylogenetic, chemotaxonomic and phenotypic analysis, the isolates represent a novel species in the genus Polaribacter, for which the name Polaribacter porphyrae sp. nov. is proposed. The type strain is LNM-20(T) ( = LMG 26671(T)  = NBRC 108759(T)). Emended descriptions of the genus Polaribacter and P. dokdonensis and P. gangjinensis are also proposed.

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Year:  2012        PMID: 22904227     DOI: 10.1099/ijs.0.041434-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Isolation of hyphomonas strains that induce normal morphogenesis in protoplasts of the marine red alga Pyropia yezoensis.

Authors:  Youhei Fukui; Mahiko Abe; Masahiro Kobayashi; Yutaka Yano; Masataka Satomi
Journal:  Microb Ecol       Date:  2014-05-20       Impact factor: 4.552

2.  Spongiiferula fulva gen. nov., sp. nov., a Bacterium of the Family Flavobacteriaceae Isolated from a Marine Sponge.

Authors:  Jaewoo Yoon; Kyoko Adachi; Hiroaki Kasai
Journal:  Curr Microbiol       Date:  2016-03-10       Impact factor: 2.188

3.  Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom.

Authors:  Peng Xing; Richard L Hahnke; Frank Unfried; Stephanie Markert; Sixing Huang; Tristan Barbeyron; Jens Harder; Dörte Becher; Thomas Schweder; Frank Oliver Glöckner; Rudolf I Amann; Hanno Teeling
Journal:  ISME J       Date:  2014-12-05       Impact factor: 10.302

4.  Evaluation of the effects of different stocking densities on the sediment microbial community of juvenile hybrid grouper (♀Epinephelus fuscoguttatus × ♂ Epinephelus lanceolatus) in recirculating aquaculture systems.

Authors:  Xiaoyan Chen; Tianyun Shao; Xiaohua Long
Journal:  PLoS One       Date:  2018-12-20       Impact factor: 3.240

5.  Characterization of Gut Microbiome in the Mussel Mytilus galloprovincialis in Response to Thermal Stress.

Authors:  Yi-Feng Li; Jia-Kang Xu; Yan-Wen Chen; Wen-Yang Ding; An-Qi Shao; Xiao Liang; You-Ting Zhu; Jin-Long Yang
Journal:  Front Physiol       Date:  2019-08-22       Impact factor: 4.566

  5 in total

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