Literature DB >> 22902369

BIRC7-E2 ubiquitin conjugate structure reveals the mechanism of ubiquitin transfer by a RING dimer.

Hao Dou1, Lori Buetow1, Gary J Sibbet1, Kenneth Cameron1, Danny T Huang1.   

Abstract

Certain RING ubiquitin ligases (E3s) dimerize to facilitate ubiquitin (Ub) transfer from ubiquitin-conjugating enzyme (E2) to substrate, but structural evidence on how this process promotes Ub transfer is lacking. Here we report the structure of the human dimeric RING domain from BIRC7 in complex with the E2 UbcH5B covalently linked to Ub (UbcH5BUb). The structure reveals extensive noncovalent donor Ub interactions with UbcH5B and both subunits of the RING domain dimer that stabilize the globular body and C-terminal tail of Ub. Mutations that disrupt these noncovalent interactions or RING dimerization reduce UbcH5BUb binding affinity and ubiquitination activity. Moreover, NMR analyses demonstrate that BIRC7 binding to UbcH5BUb induces peak-shift perturbations in the donor Ub consistent with the crystallographically-observed Ub interactions. Our results provide structural insights into how dimeric RING E3s recruit E2Ub and optimize the donor Ub configuration for transfer.

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Year:  2012        PMID: 22902369      PMCID: PMC3880866          DOI: 10.1038/nsmb.2379

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  48 in total

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Journal:  Cell       Date:  2007-07-13       Impact factor: 41.582

5.  Structural mechanisms underlying posttranslational modification by ubiquitin-like proteins.

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Journal:  Annu Rev Biophys Biomol Struct       Date:  2007

6.  Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.

Authors:  Ali A Yunus; Christopher D Lima
Journal:  Nat Struct Mol Biol       Date:  2006-05-28       Impact factor: 15.369

7.  Mms2-Ubc13 covalently bound to ubiquitin reveals the structural basis of linkage-specific polyubiquitin chain formation.

Authors:  Michael J Eddins; Candice M Carlile; Kamila M Gomez; Cecile M Pickart; Cynthia Wolberger
Journal:  Nat Struct Mol Biol       Date:  2006-09-17       Impact factor: 15.369

8.  Structure and E3-ligase activity of the Ring-Ring complex of polycomb proteins Bmi1 and Ring1b.

Authors:  Gretel Buchwald; Petra van der Stoop; Oliver Weichenrieder; Anastassis Perrakis; Maarten van Lohuizen; Titia K Sixma
Journal:  EMBO J       Date:  2006-05-18       Impact factor: 11.598

9.  An essential function of the extreme C-terminus of MDM2 can be provided by MDMX.

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Journal:  EMBO J       Date:  2006-12-14       Impact factor: 11.598

10.  E2-BRCA1 RING interactions dictate synthesis of mono- or specific polyubiquitin chain linkages.

Authors:  Devin E Christensen; Peter S Brzovic; Rachel E Klevit
Journal:  Nat Struct Mol Biol       Date:  2007-09-16       Impact factor: 15.369

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  169 in total

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2.  Control of APC/C-dependent ubiquitin chain elongation by reversible phosphorylation.

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Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-25       Impact factor: 11.205

Review 3.  Using protein motion to read, write, and erase ubiquitin signals.

Authors:  Aaron H Phillips; Jacob E Corn
Journal:  J Biol Chem       Date:  2015-09-09       Impact factor: 5.157

4.  A Bifunctional Role for the UHRF1 UBL Domain in the Control of Hemi-methylated DNA-Dependent Histone Ubiquitylation.

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Journal:  Nat Commun       Date:  2015-07-07       Impact factor: 14.919

6.  Secondary ubiquitin-RING docking enhances Arkadia and Ark2C E3 ligase activity.

Authors:  Joshua D Wright; Peter D Mace; Catherine L Day
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Review 7.  Structural and functional insights to ubiquitin-like protein conjugation.

Authors:  Frederick C Streich; Christopher D Lima
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

8.  DUB-resistant ubiquitin to survey ubiquitination switches in mammalian cells.

Authors:  Miklós Békés; Keiji Okamoto; Sarah B Crist; Mathew J Jones; Jessica R Chapman; Bradley B Brasher; Francesco D Melandri; Beatrix M Ueberheide; Eros Lazzerini Denchi; Tony T Huang
Journal:  Cell Rep       Date:  2013-11-07       Impact factor: 9.423

Review 9.  Posing the APC/C E3 Ubiquitin Ligase to Orchestrate Cell Division.

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10.  Activation of the APC/C ubiquitin ligase by enhanced E2 efficiency.

Authors:  Vanessa A Van Voorhis; David O Morgan
Journal:  Curr Biol       Date:  2014-06-12       Impact factor: 10.834

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