Literature DB >> 22899586

Computationally efficient neural feature extraction for spike sorting in implantable high-density recording systems.

Awais M Kamboh1, Andrew J Mason.   

Abstract

Modern microelectrode arrays acquire neural signals from hundreds of neurons in parallel that are subsequently processed for spike sorting. It is important to identify, extract, and transmit appropriate features that allow accurate spike sorting while using minimum computational resources. This paper describes a new set of spike sorting features, explicitly framed to be computationally efficient and shown to outperform principal component analysis (PCA)-based spike sorting. A hardware friendly architecture, feasible for implantation, is also presented for detecting neural spikes and extracting features to be transmitted for off chip spike classification. The proposed feature set does not require any off-chip training, and requires about 5% of computations as compared to the PCA-based features for the same classification accuracy, tested for spike trains with a broad range of signal-to-noise ratio. Our simulations show a reduction of required bandwidth to about 2% of original data rate, with an average classification accuracy of greater than 94% at a typical signal to noise ratio of 5 dB.

Mesh:

Year:  2012        PMID: 22899586     DOI: 10.1109/TNSRE.2012.2211036

Source DB:  PubMed          Journal:  IEEE Trans Neural Syst Rehabil Eng        ISSN: 1534-4320            Impact factor:   3.802


  6 in total

1.  Minimum requirements for accurate and efficient real-time on-chip spike sorting.

Authors:  Joaquin Navajas; Deren Y Barsakcioglu; Amir Eftekhar; Andrew Jackson; Timothy G Constandinou; Rodrigo Quian Quiroga
Journal:  J Neurosci Methods       Date:  2014-04-24       Impact factor: 2.390

2.  An Efficient Hardware Circuit for Spike Sorting Based on Competitive Learning Networks.

Authors:  Huan-Yuan Chen; Chih-Chang Chen; Wen-Jyi Hwang
Journal:  Sensors (Basel)       Date:  2017-09-28       Impact factor: 3.576

3.  Spike sorting based on shape, phase, and distribution features, and K-TOPS clustering with validity and error indices.

Authors:  Carmen Rocío Caro-Martín; José M Delgado-García; Agnès Gruart; R Sánchez-Campusano
Journal:  Sci Rep       Date:  2018-12-12       Impact factor: 4.379

4.  A robust spike sorting method based on the joint optimization of linear discrimination analysis and density peaks.

Authors:  Yiwei Zhang; Jiawei Han; Tengjun Liu; Zelan Yang; Weidong Chen; Shaomin Zhang
Journal:  Sci Rep       Date:  2022-09-15       Impact factor: 4.996

5.  Efficient architecture for spike sorting in reconfigurable hardware.

Authors:  Wen-Jyi Hwang; Wei-Hao Lee; Shiow-Jyu Lin; Sheng-Ying Lai
Journal:  Sensors (Basel)       Date:  2013-11-01       Impact factor: 3.576

6.  A Low Cost VLSI Architecture for Spike Sorting Based on Feature Extraction with Peak Search.

Authors:  Yuan-Jyun Chang; Wen-Jyi Hwang; Chih-Chang Chen
Journal:  Sensors (Basel)       Date:  2016-12-07       Impact factor: 3.576

  6 in total

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