Literature DB >> 22897443

Two thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana.

Anders R Clausen1, Lenart Girandon, Ashfaq Ali, Wolfgang Knecht, Elzbieta Rozpedowska, Michael P B Sandrini, Erik Andreasson, Birgitte Munch-Petersen, Jure Piškur.   

Abstract

Deoxyribonucleotides are the building blocks of DNA and can be synthesized via de novo and salvage pathways. Deoxyribonucleoside kinases (EC 2.7.1.145) salvage deoxyribonucleosides by transfer of a phosphate group to the 5' of a deoxyribonucleoside. This salvage pathway is well characterized in mammals, but in contrast, little is known about how plants salvage deoxyribonucleosides. We show that during salvage, deoxyribonucleosides can be phosphorylated by extracts of Arabidopsis thaliana into corresponding monophosphate compounds with an unexpected preference for purines over pyrimidines. Deoxyribonucleoside kinase activities were present in all tissues during all growth stages. In the A. thaliana genome, we identified two types of genes that could encode enzymes which are involved in the salvage of deoxyribonucleosides. Thymidine kinase activity was encoded by two thymidine kinase 1 (EC 2.7.1.21)-like genes (AtTK1a and AtTK1b). Deoxyadenosine, deoxyguanosine and deoxycytidine kinase activities were encoded by a single AtdNK gene. T-DNA insertion lines of AtTK1a and AtTK1b mutant genes had normal growth, although AtTK1a AtTK1b double mutants died at an early stage, which indicates that AtTK1a and AtTK1b catalyze redundant reactions. The results obtained in the present study suggest a crucial role for the salvage of thymidine during early plant development.
© 2012 The Authors Journal compilation © 2012 FEBS.

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Year:  2012        PMID: 22897443     DOI: 10.1111/j.1742-4658.2012.08747.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  12 in total

1.  The phylogenetic distribution and evolution of enzymes within the thymidine kinase 2-like gene family in metazoa.

Authors:  Anke Konrad; Jason Lai; Zeeshan Mutahir; Jure Piškur; David A Liberles
Journal:  J Mol Evol       Date:  2014-02-06       Impact factor: 2.395

2.  Nucleotide Metabolism in Plants.

Authors:  Claus-Peter Witte; Marco Herde
Journal:  Plant Physiol       Date:  2019-10-22       Impact factor: 8.340

3.  Arabidopsis thaliana thymidine kinase 1a is ubiquitously expressed during development and contributes to confer tolerance to genotoxic stress.

Authors:  José Antonio Pedroza-García; Manuela Nájera-Martínez; María de la Paz Sanchez; Javier Plasencia
Journal:  Plant Mol Biol       Date:  2014-12-24       Impact factor: 4.076

4.  The nucleotide metabolome of germinating Arabidopsis thaliana seeds reveals a central role for thymidine phosphorylation in chloroplast development.

Authors:  Markus Niehaus; Henryk Straube; André Specht; Chiara Baccolini; Claus-Peter Witte; Marco Herde
Journal:  Plant Cell       Date:  2022-09-27       Impact factor: 12.085

5.  Requirement and functional redundancy of two large ribonucleotide reductase subunit genes for cell cycle, chloroplast biogenesis and photosynthesis in tomato.

Authors:  Mengjun Gu; Qiao Lu; Yi Liu; Man Cui; Yaoqi Si; Huilan Wu; Tuanyao Chai; Hong-Qing Ling
Journal:  Ann Bot       Date:  2022-09-06       Impact factor: 5.040

6.  Efficient Replication of the Plastid Genome Requires an Organellar Thymidine Kinase.

Authors:  Monique Le Ret; Susan Belcher; Stéfanie Graindorge; Clémentine Wallet; Sandrine Koechler; Mathieu Erhardt; Rosalind Williams-Carrier; Alice Barkan; José M Gualberto
Journal:  Plant Physiol       Date:  2018-10-10       Impact factor: 8.340

7.  WHITE STRIPE LEAF8, encoding a deoxyribonucleoside kinase, is involved in chloroplast development in rice.

Authors:  L L Liu; J You; Z Zhu; K Y Chen; M M Hu; H Gu; Z W Liu; Z Y Wang; Y H Wang; S J Liu; L M Chen; X Liu; Y L Tian; S R Zhou; L Jiang; J M Wan
Journal:  Plant Cell Rep       Date:  2019-09-04       Impact factor: 4.570

8.  New Variants of Tomato Thymidine Kinase 1 Selected for Increased Sensitivity of E. coli KY895 towards Azidothymidine.

Authors:  Louise Slot Christiansen; Louise Egeblad; Birgitte Munch-Petersen; Jure Piškur; Wolfgang Knecht
Journal:  Cancers (Basel)       Date:  2015-06-08       Impact factor: 6.639

9.  Maize Thymidine Kinase Activity Is Present throughout Plant Development and Its Heterologous Expression Confers Tolerance to an Organellar DNA-Damaging Agent.

Authors:  Manuela Nájera-Martínez; José Antonio Pedroza-García; Luis Jiro Suzuri-Hernández; Christelle Mazubert; Jeannine Drouin-Wahbi; Jorge Vázquez-Ramos; Cécile Raynaud; Javier Plasencia
Journal:  Plants (Basel)       Date:  2020-07-23

10.  Enhanced nucleotide analysis enables the quantification of deoxynucleotides in plants and algae revealing connections between nucleoside and deoxynucleoside metabolism.

Authors:  Henryk Straube; Markus Niehaus; Sarah Zwittian; Claus-Peter Witte; Marco Herde
Journal:  Plant Cell       Date:  2021-04-17       Impact factor: 11.277

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