Literature DB >> 22897262

Kinetic lattice Monte Carlo simulation of viscoelastic subdiffusion.

Christian C Fritsch1, Jörg Langowski.   

Abstract

We propose a kinetic Monte Carlo method for the simulation of subdiffusive random walks on a cartesian lattice. The random walkers are subject to viscoelastic forces which we compute from their individual trajectories via the fractional Langevin equation. At every step the walkers move by one lattice unit, which makes them differ essentially from continuous time random walks, where the subdiffusive behavior is induced by random waiting. To enable computationally inexpensive simulations with n-step memories, we use an approximation of the memory and the memory kernel functions with a complexity O(log n). Eventual discretization and approximation artifacts are compensated with numerical adjustments of the memory kernel functions. We verify with a number of analyses that this new method provides binary fractional random walks that are fully consistent with the theory of fractional brownian motion.

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Year:  2012        PMID: 22897262     DOI: 10.1063/1.4742909

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  3 in total

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Journal:  Biophys J       Date:  2019-02-28       Impact factor: 4.033

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3.  Microtubules Regulate Localization and Availability of Insulin Granules in Pancreatic Beta Cells.

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  3 in total

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