Literature DB >> 22894513

Classification of inflammatory bowel diseases by means of Raman spectroscopic imaging of epithelium cells.

Christiane Bielecki1, Thomas W Bocklitz, Michael Schmitt, Christoph Krafft, Claudio Marquardt, Akram Gharbi, Thomas Knösel, Andreas Stallmach, Juergen Popp.   

Abstract

We report on a Raman microspectroscopic characterization of the inflammatory bowel diseases (IBD) Crohn's disease (CD) and ulcerative colitis (UC). Therefore, Raman maps of human colon tissue sections were analyzed by utilizing innovative chemometric approaches. First, support vector machines were applied to highlight the tissue morphology (=Raman spectroscopic histopathology). In a second step, the biochemical tissue composition has been studied by analyzing the epithelium Raman spectra of sections of healthy control subjects (n=11), subjects with CD (n=14), and subjects with UC (n=13). These three groups exhibit significantly different molecular specific Raman signatures, allowing establishment of a classifier (support-vector-machine). By utilizing this classifier it was possible to separate between healthy control patients, patients with CD, and patients with UC with an accuracy of 98.90%. The automatic design of both classification steps (visualization of the tissue morphology and molecular classification of IBD) paves the way for an objective clinical diagnosis of IBD by means of Raman spectroscopy in combination with chemometric approaches.

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Year:  2012        PMID: 22894513     DOI: 10.1117/1.JBO.17.7.076030

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  15 in total

1.  Cell optical density and molecular composition revealed by simultaneous multimodal label-free imaging.

Authors:  Nicolas Pavillon; Alison J Hobro; Nicholas I Smith
Journal:  Biophys J       Date:  2013-09-03       Impact factor: 4.033

Review 2.  Mammalian cell and tissue imaging using Raman and coherent Raman microscopy.

Authors:  Anthony A Fung; Lingyan Shi
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-07-19

3.  Clinical characterization of in vivo inflammatory bowel disease with Raman spectroscopy.

Authors:  Isaac J Pence; Dawn B Beaulieu; Sara N Horst; Xiaohong Bi; Alan J Herline; David A Schwartz; Anita Mahadevan-Jansen
Journal:  Biomed Opt Express       Date:  2017-01-04       Impact factor: 3.732

4.  Classification and prediction of HCC tissues by Raman imaging with identification of fatty acids as potential lipid biomarkers.

Authors:  T Tolstik; C Marquardt; C Beleites; C Matthäus; C Bielecki; M Bürger; C Krafft; O Dirsch; U Settmacher; J Popp; A Stallmach
Journal:  J Cancer Res Clin Oncol       Date:  2014-09-20       Impact factor: 4.553

5.  Decoding Optical Data with Machine Learning.

Authors:  Jie Fang; Anand Swain; Rohit Unni; Yuebing Zheng
Journal:  Laser Photon Rev       Date:  2020-12-23       Impact factor: 13.138

Review 6.  Artificial intelligence applications in inflammatory bowel disease: Emerging technologies and future directions.

Authors:  John Gubatan; Steven Levitte; Akshar Patel; Tatiana Balabanis; Mike T Wei; Sidhartha R Sinha
Journal:  World J Gastroenterol       Date:  2021-05-07       Impact factor: 5.742

7.  Raman spectroscopy of endoscopic colonic biopsies from patients with ulcerative colitis to identify mucosal inflammation and healing.

Authors:  James Addis; Noor Mohammed; Olorunda Rotimi; Derek Magee; Animesh Jha; Venkataraman Subramanian
Journal:  Biomed Opt Express       Date:  2016-04-27       Impact factor: 3.732

8.  Label-free Raman spectroscopic imaging to extract morphological and chemical information from a formalin-fixed, paraffin-embedded rat colon tissue section.

Authors:  Riana Gaifulina; Andrew Thomas Maher; Catherine Kendall; James Nelson; Manuel Rodriguez-Justo; Katherine Lau; Geraint Mark Thomas
Journal:  Int J Exp Pathol       Date:  2016-09-01       Impact factor: 1.925

9.  Pseudo-HE images derived from CARS/TPEF/SHG multimodal imaging in combination with Raman-spectroscopy as a pathological screening tool.

Authors:  Thomas W Bocklitz; Firas Subhi Salah; Nadine Vogler; Sandro Heuke; Olga Chernavskaia; Carsten Schmidt; Maximilian J Waldner; Florian R Greten; Rolf Bräuer; Michael Schmitt; Andreas Stallmach; Iver Petersen; Jürgen Popp
Journal:  BMC Cancer       Date:  2016-07-26       Impact factor: 4.430

10.  Linear and Non-Linear Optical Imaging of Cancer Cells with Silicon Nanoparticles.

Authors:  Elen Tolstik; Liubov A Osminkina; Denis Akimov; Maksim B Gongalsky; Andrew A Kudryavtsev; Victor Yu Timoshenko; Rainer Heintzmann; Vladimir Sivakov; Jürgen Popp
Journal:  Int J Mol Sci       Date:  2016-09-12       Impact factor: 5.923

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