Under normal conditions, the Arp2/3 complex activator SCAR/WAVE controls actin polymerization in pseudopods, whereas Wiskott-Aldrich syndrome protein (WASP) assembles actin at clathrin-coated pits. We show that, unexpectedly, Dictyostelium discoideum SCAR knockouts could still spread, migrate, and chemotax using pseudopods driven by the Arp2/3 complex. In the absence of SCAR, some WASP relocated from the coated pits to the leading edge, where it behaved with similar dynamics to normal SCAR, forming split pseudopods and traveling waves. Pseudopods colocalized with active Rac, whether driven by WASP or SCAR, though Rac was activated to a higher level in SCAR mutants. Members of the SCAR regulatory complex, in particular PIR121, were not required for WASP regulation. We thus show that WASP is able to respond to all core upstream signals and that regulators coupled through the other members of SCAR's regulatory complex are not essential for pseudopod formation. We conclude that WASP and SCAR can regulate pseudopod actin using similar mechanisms.
Under normal conditions, the Arp2/3 complex activator SCAR/WAVE controls actin polymerization in pseudopods, whereas Wiskott-Aldrich syndrome protein (WASP) assembles actin at clathrin-coated pits. We show that, unexpectedly, Dictyostelium discoideumSCAR knockouts could still spread, migrate, and chemotax using pseudopods driven by the Arp2/3 complex. In the absence of SCAR, some WASP relocated from the coated pits to the leading edge, where it behaved with similar dynamics to normal SCAR, forming split pseudopods and traveling waves. Pseudopods colocalized with active Rac, whether driven by WASP or SCAR, though Rac was activated to a higher level in SCAR mutants. Members of the SCAR regulatory complex, in particular PIR121, were not required for WASP regulation. We thus show that WASP is able to respond to all core upstream signals and that regulators coupled through the other members of SCAR's regulatory complex are not essential for pseudopod formation. We conclude that WASP and SCAR can regulate pseudopod actin using similar mechanisms.
Eukaryotic cells migrate using pseudopods that are made of actin filaments (Insall and Machesky, 2009). These actin
filaments are initiated by the seven-member Arp2/3 complex. The key step controlling
the formation of new pseudopods occurs when SCAR/WAVE proteins activate the Arp2/3
complex. SCAR/WAVE thus acts as the central regulator of cell movement. Other actin
nucleation promotion factors that activate the Arp2/3 complex include
Wiskott–Aldrich syndrome proteins (WASPs) and WASH. WASPs are typically found
at the plasma membrane in punctate structures associated with vesicle traffic, for
example, clathrin-coated pits (Taylor et al.,
2011; Veltman et al., 2011) and
invadopods (Yamaguchi et al., 2005). WASH,
on the other hand, acts intracellularly on vesicles such as recycling endosomes
(Derivery et al., 2009; Gomez and Billadeau, 2009) and lysosomes
(Carnell et al., 2011).Arp2/3 activators’ activation and recruitment are controlled by signaling
proteins. Both SCAR/WAVE and WASP are activated by small GTPases of the Rho family
(Higgs and Pollard, 2001), though
numerous other signaling pathways have been described. WASPs bind directly to Cdc42
(Symons et al., 1996) and (in the case
of neural WASP [N-WASP]) Rac (Tomasevic et al.,
2007) through their Cdc42- and Rac-interacting and binding (CRIB)
domains. SCAR/WAVEs do not possess any GTPase-binding domains but are activated by
Rac as part of a five-member complex including PIR121, Nap1, Abelson kinase (Abl)
interactor (Abi), and HSPC300 (Eden et al.,
2002). PIR121 binds directly to Rac, whereas Abi has also been found to
bind to WASP (Innocenti et al., 2005), thus
providing a connection between WASP and SCAR/WAVE regulation. The detailed roles of
the complex members are not well understood; however, Nap1 has been associated with
adhesion (Ibarra et al., 2006; Weiner et al., 2006), but the direct
regulators are not known, and HSPC300 remains a mystery.SCAR was first discovered in Dictyostelium discoideum (Bear et al., 1998), a widely used target of
cell migration research. SCAR, its regulatory complex, and WASP are all well
conserved relative to the metazoan proteins (Veltman and Insall, 2010) but are encoded by single genes, making
D. discoideum an ideal organism for analysis of the control of
the Arp2/3 complex (King and Insall, 2009).
However, D. discoideum is unusual in one respect. Mutants in SCAR
or its complex have multiple, strong phenotypes. Cell size and speed, pseudopod
size, and actin polymerization in response to signals are all decreased (Blagg et al., 2003; Ura et al., 2012). In qualitative terms, though, cells move
and chemotax surprisingly well, considering the principal pseudopod pathway has been
deleted. D. discoideum has a strong bleb pathway (Yoshida and Soldati, 2006), which can
generate protrusions independently of the Arp2/3 complex using hydrostatic pressure.
Loss of WASP is believed to be lethal (Myers et
al., 2005).In this paper, we show that pseudopods in SCAR mutant cells are generated after WASP
relocalizes to the leading edge. This shows unexpected plasticity in the regulation
of actin polymerization but, more surprisingly, that WASP is able to respond to all
the signals that are necessary for pseudopod generation and chemotaxis.
Results and discussion
Separate roles of SCAR and WASP in wild-type cells
We examined the localization of the SCAR complex in living cells by total
internal reflection fluorescence (TIRF) microscopy. Several different GFP
fusions all behaved similarly, indicating that the GFP tag was not causing SCAR
mislocalization (Fig. S1
A); GFP-HSPC300 gave a clear signal and was experimentally easy,
so we used it as a marker for the complete SCAR complex. We saw an extremely
dynamic pattern of localization (Video
1), as has been seen in cultured human neutrophils (Weiner et al., 2007). There were the
expected localizations at the extreme front of pseudopods and the tips of
filopods (Fig. 1 A); essentially all
actin pseudopods in wild-type cells have a bright region of localized SCAR. This
contrasts starkly with fixed cells (Pollitt et
al., 2006) in which SCAR shows almost no distinct localization,
presumably because the protein is too dynamic to fix. More surprisingly, two
conditions revealed particularly strong SCAR localization. Cell–cell
contacts were bright in vegetative cells and throughout development, and
recruitment was particularly bright all around the edge when cells first spread
after adhering (Fig. 1 A). Once cells
were fully spread, the SCAR localization became more fleeting and restricted to
the leading edge.
Figure 1.
SCAR complex and WASP localization in wild-type (A) TIRF microscopy of SCAR
complex (labeled with HSPC300-GFP) in pseudopods, filopods,
cell–cell contact, and cell spreading of wild-type cells. Numbers
indicate the time in seconds. The position of the asterisks is fixed
across different time points. Arrows show SCAR-rich protrusions. (B and
C) Colocalization of GFP-tagged SCAR complex (B) and WASP (C) with
RFP-tagged Arp2/3 complex (subunit ARPC4) during cell migration.
Quantitations of the fluorescence intensity along the indicated lines
through the pseudopod are displayed on the right. Images are
representative of ≥50 cells observed. (D) Colocalization of
GFP-WASP and RFP-clathrin light chain. (E) Kymograph from a video
similar to D showing arrival and disappearance of clathrin and WASP
during a single clathrin-mediated endocytosis event. a.u., arbitrary
unit. Bars, 5 µm.
SCAR complex and WASP localization in wild-type (A) TIRF microscopy of SCAR
complex (labeled with HSPC300-GFP) in pseudopods, filopods,
cell–cell contact, and cell spreading of wild-type cells. Numbers
indicate the time in seconds. The position of the asterisks is fixed
across different time points. Arrows show SCAR-rich protrusions. (B and
C) Colocalization of GFP-tagged SCAR complex (B) and WASP (C) with
RFP-tagged Arp2/3 complex (subunit ARPC4) during cell migration.
Quantitations of the fluorescence intensity along the indicated lines
through the pseudopod are displayed on the right. Images are
representative of ≥50 cells observed. (D) Colocalization of
GFP-WASP and RFP-clathrin light chain. (E) Kymograph from a video
similar to D showing arrival and disappearance of clathrin and WASP
during a single clathrin-mediated endocytosis event. a.u., arbitrary
unit. Bars, 5 µm.The Arp2/3 complex is principally seen in two sites, leading pseudopods (Hahne et al., 2001) and puncta at the
base of the cell that colocalize with clathrin (Kaksonen et al., 2006; Taylor et al., 2011). We examined the colocalization in TIRF of each
structure with SCAR and the D. discoideumWASP orthologue. In
pseudopods, only SCAR was normally visible (Fig.
1 B), in a narrow strip marginally in front of the start of the
broader Arp2/3 band. WASP was recruited to clathrin puncta as previously
described (Veltman et al., 2011), but
SCAR was not. Detailed examination of the leading edge (Fig. 1 C) showed no discernible increase in WASP levels at
the leading edge or throughout the Arp2/3 complex band. This conflicts with a
previous study (Myers et al., 2005). We
did not observe the broad bands of WASP reported by Myers et al. (2005) by TIRF, confocal, or wide-field
microscopy (Fig. S1 B), and quantitative analysis (Fig. 1 C) does not show significant WASP localization in
pseudopods. YeastWASP (Sun et al.,
2006) and humanN-WASP (Taylor et
al., 2011) in clathrin puncta are connected with the final stage of
endocytosis, and the same is true for D. discoideum (Veltman et al., 2011). Each clathrin spot
acquires a spot of WASP shortly before it vanishes from the TIRF field (which
occurs as coated pits bud off into the cell; Fig. 1 D and Video 1), and every WASP spot is associated with a
clathrin punctum. There is thus a clear separation of function in wild-type
cells, with WASP connected with clathrin-mediated endocytosis and SCAR with
leading edge protrusion.
Redeployment of WASP in SCAR mutants
The relatively normal migration of SCAR mutants (Blagg et al., 2003) has been a puzzle for several years. We
previously suspected that SCAR knockouts moved using blebs. Although SCAR
mutants generate substantially more blebs than wild type, they still generate
true actin pseudopods with normal Arp2/3 complex localization. We therefore
transfected SCAR mutants with RFP-Arp2/3 and GFP-WASP and examined them by TIRF
microscopy. Surprisingly, Arp2/3-positive pseudopods all contained WASP at the
extreme leading edge in the position normally filled by SCAR (Fig. 2 A and Video
2). WASP did not lose its normal localization to puncta (Fig. 2, A and F, last image) but took on
both functions simultaneously.
Figure 2.
WASP compensates for the loss of SCAR. (A) Colocalization of
WASP and Arp2/3 complex in SCAR-null cells. (B) Kymograph showing
distribution of GFP-tagged WASP and SCAR complex with RFP-tagged Arp2/3
complex in a wild-type cell protrusion. The protrusion extends upwards,
and time is along the horizontal axis. (C) Kymograph of WASP and the
Arp2/3 complex in a protrusion of a SCAR-null cell. (D) Quantification
of the number of pseudopods with SCAR complex and with WASP and the
number of blebs in wild-type and SCAR-null cells. Over 200
pseudopods/blebs were counted in a total of 40 cells that were recorded
with time-lapse microscopy for a length of 10 min each. (E) Western blot
of whole-cell lysates of the indicated strains with an anti-WASP
antibody. After immunodetection, the blot was stained with Coomassie
brilliant blue. Molecular mass (Mm) size markers are indicated on the
right in kilodaltons. (F) TIRF microscopy image of GFP-WASP in a
SCAR-null cell that is dropping out of solution and spreading on the
glass substratum. Time is indicated in seconds. Bars, 5 µm.
WASP compensates for the loss of SCAR. (A) Colocalization of
WASP and Arp2/3 complex in SCAR-null cells. (B) Kymograph showing
distribution of GFP-tagged WASP and SCAR complex with RFP-tagged Arp2/3
complex in a wild-type cell protrusion. The protrusion extends upwards,
and time is along the horizontal axis. (C) Kymograph of WASP and the
Arp2/3 complex in a protrusion of a SCAR-null cell. (D) Quantification
of the number of pseudopods with SCAR complex and with WASP and the
number of blebs in wild-type and SCAR-null cells. Over 200
pseudopods/blebs were counted in a total of 40 cells that were recorded
with time-lapse microscopy for a length of 10 min each. (E) Western blot
of whole-cell lysates of the indicated strains with an anti-WASP
antibody. After immunodetection, the blot was stained with Coomassie
brilliant blue. Molecular mass (Mm) size markers are indicated on the
right in kilodaltons. (F) TIRF microscopy image of GFP-WASP in a
SCAR-null cell that is dropping out of solution and spreading on the
glass substratum. Time is indicated in seconds. Bars, 5 µm.The cells were less polar, and fewer pseudopods were generated (Fig. 2 D), but they behaved normally. The
WASP patch also migrated with the leading edge and drove protrusion at normal
rates (Fig. 2, B and C, kymographs).
Thus, WASP was redeployed to replace the function lost in SCAR knockouts. WASPexpression levels remained unaltered in SCAR knockout cells (Fig. 2 E). WASP replaced SCAR in other
locations besides pseudopods (Fig. 2 F),
particularly spreading edges (Video
3). Overall, the only difference between localizations of SCAR in
normal cells and WASP in SCAR knockouts was in the number of events. As far as
we can tell, every structure that usually contains SCAR is still present in SCAR
knockouts but with WASP in the place of SCAR.
Evolution of WASP-driven pseudopods
We examined the evolution of pseudopods using TIRF microscopy. SCAR localization
is highly dynamic and typically spreads laterally along the cell edge. SCAR
patches can become unstable and divide into two subregions (Fig. 3 A), causing the pseudopod to split (Andrew and Insall, 2007). Again, WASP
behaved very similarly in SCAR mutants (Fig. 3
A). In neutrophils, the SCAR complex is recruited in expanding waves
that underpin pseudopod formation (Weiner et
al., 2006). We do not usually see expanding waves of SCAR complex in
D. discoideum, but interestingly, the WASP in SCAR mutants
can sometimes form expanding waves that resemble SCAR in neutrophils (Fig. 3 B and Video
4).
Figure 3.
WASP dynamics in SCAR complex mutants. (A) TIRF image series
of splitting pseudopods in a wild-type cell labeled with HSPC300-GFP and
a SCAR knockout cell labeled with GFP-WASP. Cells are moving to the
right, and time is indicated in seconds. (B) TIRF image series of WASP
waves in a SCAR-null cell. In the top images, this image is overlaid
with the localization of WASP 2 s before the current frame, and in the
bottom images, this image is overlaid with the Arp2/3 complex. A
single-pass Gaussian blur was applied to the full image to smooth
background fluorescence. The arrow tracks a single WASP wave. (C) TIRF
images of GFP-WASP and RFP-tagged Arp2/3 complex in strains deleted for
PIR121, Nap1, Abi, and HSPC300. Bars, 5 µm.
WASP dynamics in SCAR complex mutants. (A) TIRF image series
of splitting pseudopods in a wild-type cell labeled with HSPC300-GFP and
a SCAR knockout cell labeled with GFP-WASP. Cells are moving to the
right, and time is indicated in seconds. (B) TIRF image series of WASP
waves in a SCAR-null cell. In the top images, this image is overlaid
with the localization of WASP 2 s before the current frame, and in the
bottom images, this image is overlaid with the Arp2/3 complex. A
single-pass Gaussian blur was applied to the full image to smooth
background fluorescence. The arrow tracks a single WASP wave. (C) TIRF
images of GFP-WASP and RFP-tagged Arp2/3 complex in strains deleted for
PIR121, Nap1, Abi, and HSPC300. Bars, 5 µm.
Other SCAR complex subunits are not required
The unexpected replacement of SCAR by WASP raises fundamental questions about the
regulation of Arp2/3 complex in pseudopods. SCAR is thought to couple to most
signaling pathways through its regulatory complex (Chen et al., 2010), in particular by PIR121 binding to
activated Rac (Kobayashi et al., 1998)
and Abi-coupling protein kinases, such as Src (Ardern et al., 2006) and Abl (Dai
and Pendergast, 1995), to actin dynamics. Furthermore, Abi has been
shown to interact with mammalian WASPs and connect SCAR and N-WASP function
(Innocenti et al., 2005). We
therefore examined WASP dynamics in SCAR complex mutants. Actin pseudopods still
contained both WASP and the Arp2/3 complex in mutants lacking each of the SCAR
complex subunits (Fig. 3 B). Thus, the
connection between signaling pathways and WASP is not mediated by cross talk
through the SCAR complex.
Rac activation and WASP localization
If WASP is not recruited through the SCAR regulatory complex, how is its
localization controlled? It is not simply carried by F-actin because wild-type
pseudopods have plenty of F-actin but no WASP. The most likely shared component
is Rac, which binds to the PIR121 subunit of the SCAR complex. Mammalian WASPs
contain a small GTPase-binding CRIB domain. It is usually reported that this is
specific for Cdc42 binding (Aspenström
et al., 1996), but several workers have found that Rac1 is also
effective (Aspenström et al.,
1996; Kolluri et al., 1996;
Tomasevic et al., 2007). In
D. discoideum, an unusual Rac (RacC) normally mediates WASP
activation, but GTP-bound Rac1 isoforms also bind (Han et al., 2006).We examined the location of active Rac in living cells. We initially examined
FRET-based probes based on the Raichu format (Mochizuki et al., 2001), but they caused an unacceptable dominant
Rac1 activation effect, causing even vegetative cells to become hyperpolar and
adhesive. However, GFP and monomeric RFP (mRFP) variant, mRFPmars fusions of the
CRIB domain from PakB (de la Roche et al.,
2005), which binds strongly to Racs, in particular Rac1a–c,
yielded good localization. When CRIB-GFP was examined by confocal microscopy, a
small peak was visible in planes above the base of the cell (Fig. 4 A). In TIRF microscopy, however, the
localization was far clearer, but the active Rac was present in a patch of
membrane around the leading edge. Thus, active Rac is found in the pattern shown
in Fig. 4 B, defining the front portion
of the cell. This closely resembles the localization seen in mammalian
cells.
Figure 4.
Correlation between WASP, SCAR, and active Rac. (A)
Visualization of the active Rac marker CRIB-GFP in a migrating cell in a
confocal slice at a position 1 µm above the basal membrane
(confocal) and directly on the basal membrane (TIRF). Arrowheads mark
active protrusions. (B) Schematic drawing of the distribution of active
Rac in a migrating cell. (C) TIRF image of a migrating cell coexpressing
the active Rac marker CRIB-RFP and a marker for the SCAR complex
(HSPC300-GFP) or GFP-WASP. (D) Quantification of the number of visible
SCAR and WASP protrusions that are located on active Rac patches and
outside of active Rac patches, respectively (n =
130 pseudopods from two experiments). (E) CRIB-GFP and free RFP were
coexpressed in the indicated cells and visualized using TIRF microscopy.
Active Rac distribution was normalized by dividing the CRIB-GFP signal
by the free RFP signal. Background signal outside of the cell was
masked. Arrow indicates cell’s direction. (F) Short videos of
cells coexpressing CRIB-GFP and free RFP were recorded. Active Rac
levels were normalized as described in E. The fold enrichment of active
Rac in pseudopods in the normalized image was calculated by dividing the
mean pixel value of the pseudopod by the mean pixel value of the
cytosol. For each cell, the fold enrichment in pseudopods of each cell
is plotted. Each data point is the mean of at least three pseudopods.
The difference between the means is significant (Student’s
t test, P < 0.001). Lines and error bars
indicate means ± SEM. Bars, 5 µm.
Correlation between WASP, SCAR, and active Rac. (A)
Visualization of the active Rac marker CRIB-GFP in a migrating cell in a
confocal slice at a position 1 µm above the basal membrane
(confocal) and directly on the basal membrane (TIRF). Arrowheads mark
active protrusions. (B) Schematic drawing of the distribution of active
Rac in a migrating cell. (C) TIRF image of a migrating cell coexpressing
the active Rac marker CRIB-RFP and a marker for the SCAR complex
(HSPC300-GFP) or GFP-WASP. (D) Quantification of the number of visible
SCAR and WASP protrusions that are located on active Rac patches and
outside of active Rac patches, respectively (n =
130 pseudopods from two experiments). (E) CRIB-GFP and free RFP were
coexpressed in the indicated cells and visualized using TIRF microscopy.
Active Rac distribution was normalized by dividing the CRIB-GFP signal
by the free RFP signal. Background signal outside of the cell was
masked. Arrow indicates cell’s direction. (F) Short videos of
cells coexpressing CRIB-GFP and free RFP were recorded. Active Rac
levels were normalized as described in E. The fold enrichment of active
Rac in pseudopods in the normalized image was calculated by dividing the
mean pixel value of the pseudopod by the mean pixel value of the
cytosol. For each cell, the fold enrichment in pseudopods of each cell
is plotted. Each data point is the mean of at least three pseudopods.
The difference between the means is significant (Student’s
t test, P < 0.001). Lines and error bars
indicate means ± SEM. Bars, 5 µm.When SCAR and active Rac reporter were colocalized in living cells, it became
clear that SCAR recruitment only occurred at sites of Rac activation (Fig. 4 C). In SCAR mutants, the pattern of
Rac activation was not greatly altered, but WASP was recruited to the areas of
active Rac. A detailed analysis shows that SCAR recruitment is totally
restricted to the patches of the membrane in which Rac was activated (Fig. 4 D); in SCAR−
cells, WASP behaves in exactly the same way. Thus, in each case, Rac activation
is a principal determinant of Arp2/3 complex activation and pseudopod
formation.
Why does WASP relocalize in SCAR− mutants?
While examining the colocalization of WASP and active Rac, we observed that SCAR
mutants consistently showed a stronger CRIB-GFP localization in pseudopods. We
quantified this ratiometrically to normalize for uneven TIRF illumination.
CRIB-GFP was coexpressed with free RFP, and Rac activation was measured by the
green/red ratio (Fig. 4 E).
Quantification of the data (Fig. 4 F)
confirms that the enrichment of active Rac in pseudopods is consistently
substantially higher in the mutants.This suggests that WASP can be recruited to pseudopods by higher than usual
levels of activated Rac1. To test this, we inducibly expressed dominant-active
(G12V) Rac1A in wild-type cells and dominant-negative Rac1A (S17N) in SCAR
mutants (Fig.
S2). The dominant-active Rac1 caused strong recruitment of
GFP-WASP all the way round the periphery of the wild-type cells, confirming that
Rac1 activation is sufficient to recruit WASP. A complete ring, which is never
normally seen, was observed in 11/100 cells. The dominant-negative Rac1 caused
almost all WASP localization and pseudopod formation to be lost in 100% of
observed cells (n > 100).This allows us to propose a consistent and convincing model for the
relocalization of WASP when SCAR function is lost (Fig. 5). In normal cells, SCAR recruitment occurs in
patches of activated Rac. This causes Arp2/3 recruitment and pseudopod formation
but also (directly or indirectly) results in Rac1 inactivation. When SCAR
function is lost, by deletion of the genes for SCAR or any members of its
regulatory complex, this Rac inactivation no longer occurs, and the level of
activated Rac increases. When the level of activated Rac becomes high enough,
WASP is recruited through its CRIB domain. In normal cells, SCAR is recruited by
lower levels of active Rac1, and this recruitment maintains a low level Rac1
activation, so WASP is not normally recruited.
Figure 5.
Model of protrusion formation by SCAR and WASP in wild-type
cells. Rac1 activation of the SCAR complex leads to new actin
filament formation. We predict the following: (a) Feedback through actin
filaments results in excitable behavior and a normal pseudopod cycle.
(b) The Rac signal is turned off through negative feedback as the
pseudopod matures. (c) In the absence of SCAR, protrusion formation is
diminished, and active Rac levels increase until they engage WASP, which
then replaces SCAR in essentially all respects. (d) In SCAR-null cells,
as in wild-type cells, evolving pseudopods are formed through feedback,
and normal protrusions are formed, though at a reduced frequency.
Model of protrusion formation by SCAR and WASP in wild-type
cells. Rac1 activation of the SCAR complex leads to new actin
filament formation. We predict the following: (a) Feedback through actin
filaments results in excitable behavior and a normal pseudopod cycle.
(b) The Rac signal is turned off through negative feedback as the
pseudopod matures. (c) In the absence of SCAR, protrusion formation is
diminished, and active Rac levels increase until they engage WASP, which
then replaces SCAR in essentially all respects. (d) In SCAR-null cells,
as in wild-type cells, evolving pseudopods are formed through feedback,
and normal protrusions are formed, though at a reduced frequency.
Implications
Our conclusion that WASP can replace the functions of SCAR has surprising
implications for the control of actin polymerization and cell movement. Most
authors currently consider WASP and SCAR to be parts of completely separate
pathways (Stradal et al., 2004). They
perform different roles within the cell and have different regulators. Even in
mammalian cells, there are data contradicting this point—Rac1, the
upstream regulator of mammalianSCAR/WAVE, can also bind and activate WASP and
(particularly) N-WASP (Tomasevic et al.,
2007). Our data go much further—in SCAR knockout cells, we
find that WASP acquires SCAR’s localization, and the data suggest WASP
replaces its fundamental functions. Of course, the global proteomes of SCAR
mutants will be altered in complex and unforeseeable ways, but the obvious
conclusion is that all essential upstream regulatory pathways and downstream
effector pathways are shared between WASP and SCAR.The recapitulation of the traveling waves is particularly striking. Such waves,
which have been seen in other cells like neutrophils, require the existence of a
positive feedback loop including SCAR and actin. We had previously presumed that
this was mediated by the other four members of the SCAR regulatory complex
(Nap1, PIR121, HSPC300, and Abi). However, because WASP does not bind to these
proteins and because waves propagate effectively without them (Fig. 3), none of them is needed to make a
positive feedback loop. They may take part in the wave-generating loop in normal
cells, but none is essential.One other form of feedback is also implied by our data. The increased Rac
activation in SCAR knockouts implies that SCAR inhibits its upstream regulators.
Rac activates SCAR, but SCAR activation feeds back negatively to Rac. This type
of self-limitation is an important feature of robust systems (Brandman and Meyer, 2008) that also use
positive feedback. It could be mediated by either SCAR itself, a member of the
SCAR regulatory complex, or a downstream effector, such as actin or the Arp2/3
complex. Such feedback would have a key role in limiting the extent of pseudopod
generation and thus in cell polarization. It could act through direct inhibition
of any of the huge family of RacGEFs, activation of the similarly huge family of
RacGAPs, or through more complex indirect pathways. One possible candidate is
the WAVE-associated RacGAP (Soderling et al.,
2002); though in D. discoideum, we did not find a
strong association between the WAVE-associated RacGAP homologues (MEGAPs 1 and
2) and SCAR (Heath and Insall,
2008).Overall, our data provide important and very unexpected limits on the mechanisms
that generate pseudopods and actin regulation. Future work should focus on those
interactors that are shared between SCAR and WASP (Rac and the Arp2/3 complex,
in particular) as well as the specific components of each pathway.
Materials and methods
Cell strains
The axenic D. discoideum strain AX3 was used as wild type.
Knockout cell strains for SCAR (IR46), PIR121 (SB3), NAP (SB12), Abi (AP5b), and
HSPC300 (AP1) are previously described elsewhere (Blagg et al., 2003; Ibarra et al., 2006; Pollitt and
Insall, 2008, 2009). In each
strain, the gene was disrupted through homologous recombination by inserting a
blasticidin resistance cassette into the open reading frame of the gene.
Knockouts were confirmed by PCR. The marked cells expressing dominant Rac
mutants were made as follows: A single vector expressing both GFP-WASP and PakB
CRIB-mRFP (pDM982) was integrated into the genome of wild-type and SCAR-null
cells. Transformants with appropriate expression levels of both GFP and mRFP
were selected after cloning and then transfected with an extrachromosomal,
inducible vector expressing constitutively active Rac1G12V (pDM987) and
dominant-negative Rac1T17N (pDM985). WASP polyclonal antibody was a gift from
T. Soldati (University of Geneva, Geneva, Switzerland).
DNA constructs
Selected genes were amplified from cDNA. Primers were designed using the genome
data on Dictybase as a guideline. BglII–SpeI-compatible restriction sites
were added before the start codon and after the last codon of the open reading
frame. The CRIB motif was amplified from cDNA using primers
5′-ATGTCAATTTTCACTAATAAGAAAAAG-3′ and
5′-TTGAGCTTGTTGTTGTTGTTGTTGCATATG-3′ encoding
residues 339–420 of D. discoideum PakB. PCR fragments
were cloned in the PCR ligation vector pDM368 and fully sequenced. Correct
clones were selected, and the genes were subcloned into a GFP expression vector
(pDM448/pDM450 for N-terminal or C-terminal fusions, respectively; Veltman et al., 2009). For coexpression,
the second gene was cloned into an mRFPshuttle vector (pDM411/pDM413 for
N-terminal or C-terminal fusions, respectively). The entire expression cassette
was excised with NgoMIV and cloned into the single NgoMIV site of the GFP
expression vector that contains the first gene.
Microscopy and image analysis
Cells were incubated overnight under LoFlo medium (ForMedium) to remove
autofluorescence in preparation for fluorescence microscopy. Cells were washed
with development buffer (DB; 10 mM Na/K phosphate buffer, pH 6.5, 2 mM
MgCl2, and 1 mM CaCl2) and starved as a monolayer in a
Petri dish under DB until the onset of streaming to obtain developed cells.
Vegetative cells were imaged in LoFlo medium, and developed cells were imaged in
DB.TIRF microscopy was performed at 21°C on a microscope (Eclipse TE2000-U;
Nikon) that was fitted with a custom TIRF condenser and a 1.45 NA, 100×
Plan Apochromat TIRF objective (Nikon). Red and green fluorescent signals were
separated using a beam splitter and projected onto an EM charge-coupled device
camera (Cascade II:512; Photometrics). MetaMorph software (Molecular Devices)
was used to control the camera, shutters, and light sources. Wide-field
fluorescence microscopy was performed on the same microscope but with a mercury
lamp (X-Cite 120PC Q; Lumen Dynamics) as a light source. Confocal microscopy was
performed on a microscope (A1R; Nikon) using a 1.4 NA, 60× Plan
Apochromat objective.Microscopy data were analyzed using ImageJ (National Institutes of Health). For
Video 1, a windowed-sinc filter was applied to reduce noise. Active Rac levels
were quantified as follows. A single-pass Gaussian blur was first applied to the
image to remove potential zero-value pixels. Then, pixel values of the green
channel (CRIB-GFP) were divided by the pixel values of the red channel (free
RFP) to compensate for potential illumination differences originating from local
differences in the distance between the membrane and the glass surface. The fold
enrichment of the active Rac signal in the pseudopod was calculated by dividing
the mean pixel value in the pseudopod by the mean pixel value of the cell
body.
Online supplemental material
Fig. S1 shows the normal location of SCAR complex and WASP. Fig. S2 shows how
dominant Rac mutants affect WASP localization in SCAR knockout cells. Videos 1
and 2 show the change in WASP distribution in pseudopods of wild-type and SCAR
knockout cells, respectively. Video 3 shows cell spreading of SCAR in wild-type
cells and WASP in SCAR knockout cells. Video 4 shows self-propagating waves of
WASP in SCAR-null cells that mimic the waves of SCAR seen elsewhere. Online
supplemental material is available at http://www.jcb.org/cgi/content/full/jcb.201205058/DC1.
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