| Literature DB >> 22884312 |
Abstract
A statistical study of cis-regulatory modules (CRMs) is presented based on the estimation of similar-word set distribution. It is observed that CRMs tend to have a fat-tail distribution. A new statistical fat-tail test with two kurtosis-based fatness coefficients is proposed to distinguish CRMs from non-CRMs. As compared with the existing fluffy-tail test, the first fatness coefficient is designed to reduce computational time, making the novel fat-tail test very suitable for long sequences and large database analysis in the post-genome time and the second one to improve separation accuracy between CRMs and non-CRMs. These two fatness coefficients may serve as valuable filtering indexes to predict CRMs experimentally.Entities:
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Year: 2012 PMID: 22884312 DOI: 10.1016/j.compbiomed.2012.07.007
Source DB: PubMed Journal: Comput Biol Med ISSN: 0010-4825 Impact factor: 4.589