Literature DB >> 22877610

Molecular delineation of species in the coral holobiont.

Michael Stat1, Andrew C Baker, David G Bourne, Adrienne M S Correa, Zac Forsman, Megan J Huggett, Xavier Pochon, Derek Skillings, Robert J Toonen, Madeleine J H van Oppen, Ruth D Gates.   

Abstract

The coral holobiont is a complex assemblage of organisms spanning a diverse taxonomic range including a cnidarian host, as well as various dinoflagellate, prokaryotic and acellular symbionts. With the accumulating information on the molecular diversity of these groups, binomial species classification and a reassessment of species boundaries for the partners in the coral holobiont is a logical extension of this work and will help enhance the capacity for comparative research among studies. To aid in this endeavour, we review the current literature on species diversity for the three best studied partners of the coral holobiont (coral, Symbiodinium, prokaryotes) and provide suggestions for future work on systematics within these taxa. We advocate for an integrative approach to the delineation of species using both molecular genetics in combination with phenetic characters. We also suggest that an a priori set of criteria be developed for each taxonomic group as no one species concept or accompanying set of guidelines is appropriate for delineating all members of the coral holobiont.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22877610     DOI: 10.1016/B978-0-12-394282-1.00001-6

Source DB:  PubMed          Journal:  Adv Mar Biol        ISSN: 0065-2881            Impact factor:   5.143


  13 in total

1.  Morphological variation and different branch modularity across contrasting flow conditions in dominant Pocillopora reef-building corals.

Authors:  David A Paz-García; Alejandro Aldana-Moreno; Rafael A Cabral-Tena; Francisco J García-De-León; Michael E Hellberg; Eduardo F Balart
Journal:  Oecologia       Date:  2015-01-04       Impact factor: 3.225

2.  Coral reef invertebrate microbiomes correlate with the presence of photosymbionts.

Authors:  David G Bourne; Paul G Dennis; Sven Uthicke; Rochelle M Soo; Gene W Tyson; Nicole Webster
Journal:  ISME J       Date:  2013-01-10       Impact factor: 10.302

3.  Depth specialization in mesophotic corals (Leptoseris spp.) and associated algal symbionts in Hawai'i.

Authors:  X Pochon; Z H Forsman; H L Spalding; J L Padilla-Gamiño; C M Smith; R D Gates
Journal:  R Soc Open Sci       Date:  2015-02-04       Impact factor: 2.963

4.  Variability of Symbiodinium Communities in Waters, Sediments, and Corals of Thermally Distinct Reef Pools in American Samoa.

Authors:  Ross Cunning; Denise M Yost; Marisa L Guarinello; Hollie M Putnam; Ruth D Gates
Journal:  PLoS One       Date:  2015-12-29       Impact factor: 3.240

5.  The extended phenotypes of marine symbioses: ecological and evolutionary consequences of intraspecific genetic diversity in coral-algal associations.

Authors:  John E Parkinson; Iliana B Baums
Journal:  Front Microbiol       Date:  2014-08-25       Impact factor: 5.640

Review 6.  The engine of the reef: photobiology of the coral-algal symbiosis.

Authors:  Melissa S Roth
Journal:  Front Microbiol       Date:  2014-08-22       Impact factor: 5.640

7.  Clues to unraveling the coral species problem: distinguishing species from geographic variation in Porites across the Pacific with molecular markers and microskeletal traits.

Authors:  Zac Forsman; Gerrard M Wellington; George E Fox; Robert J Toonen
Journal:  PeerJ       Date:  2015-02-03       Impact factor: 2.984

8.  Intra-genomic variation in symbiotic dinoflagellates: recent divergence or recombination between lineages?

Authors:  Shaun P Wilkinson; Paul L Fisher; Madeleine J H van Oppen; Simon K Davy
Journal:  BMC Evol Biol       Date:  2015-03-14       Impact factor: 3.260

9.  Using high-throughput sequencing of ITS2 to describe Symbiodinium metacommunities in St. John, US Virgin Islands.

Authors:  Ross Cunning; Ruth D Gates; Peter J Edmunds
Journal:  PeerJ       Date:  2017-06-21       Impact factor: 2.984

10.  Genome Size, rDNA Copy, and qPCR Assays for Symbiodiniaceae.

Authors:  Osama S Saad; Xin Lin; Tsz Yan Ng; Ling Li; Put Ang; Senjie Lin
Journal:  Front Microbiol       Date:  2020-05-26       Impact factor: 5.640

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