Literature DB >> 22872868

Essential anaplerotic role for the energy-converting hydrogenase Eha in hydrogenotrophic methanogenesis.

Thomas J Lie1, Kyle C Costa, Boguslaw Lupa, Suresh Korpole, William B Whitman, John A Leigh.   

Abstract

Despite decades of study, electron flow and energy conservation in methanogenic Archaea are still not thoroughly understood. For methanogens without cytochromes, flavin-based electron bifurcation has been proposed as an essential energy-conserving mechanism that couples exergonic and endergonic reactions of methanogenesis. However, an alternative hypothesis posits that the energy-converting hydrogenase Eha provides a chemiosmosis-driven electron input to the endergonic reaction. In vivo evidence for both hypotheses is incomplete. By genetically eliminating all nonessential pathways of H(2) metabolism in the model methanogen Methanococcus maripaludis and using formate as an additional electron donor, we isolate electron flow for methanogenesis from flux through Eha. We find that Eha does not function stoichiometrically for methanogenesis, implying that electron bifurcation must operate in vivo. We show that Eha is nevertheless essential, and a substoichiometric requirement for H(2) suggests that its role is anaplerotic. Indeed, H(2) via Eha stimulates methanogenesis from formate when intermediates are not otherwise replenished. These results fit the model for electron bifurcation, which renders the methanogenic pathway cyclic, and as such requires the replenishment of intermediates. Defining a role for Eha and verifying electron bifurcation provide a complete model of methanogenesis where all necessary electron inputs are accounted for.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22872868      PMCID: PMC3458328          DOI: 10.1073/pnas.1208779109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

Review 1.  Energy-converting [NiFe] hydrogenases from archaea and extremophiles: ancestors of complex I.

Authors:  Reiner Hedderich
Journal:  J Bioenerg Biomembr       Date:  2004-02       Impact factor: 2.945

2.  Regulation of nif expression in Methanococcus maripaludis: roles of the euryarchaeal repressor NrpR, 2-oxoglutarate, and two operators.

Authors:  Thomas J Lie; Gwendolyn E Wood; John A Leigh
Journal:  J Biol Chem       Date:  2004-12-07       Impact factor: 5.157

3.  Markerless mutagenesis in Methanococcus maripaludis demonstrates roles for alanine dehydrogenase, alanine racemase, and alanine permease.

Authors:  Brian C Moore; John A Leigh
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

4.  Stimulation of CO2 reduction to methane by methylcoenzyme M in extracts Methanobacterium.

Authors:  R P Gunsalus; R S Wolfe
Journal:  Biochem Biophys Res Commun       Date:  1977-06-06       Impact factor: 3.575

5.  Intracellular pyruvate flux in the methane-producing archaeon Methanococcus maripaludis.

Authors:  Yu-Ling Yang; John N Glushka; William B Whitman
Journal:  Arch Microbiol       Date:  2002-09-19       Impact factor: 2.552

6.  Genetic analysis of the archaeon Methanosarcina barkeri Fusaro reveals a central role for Ech hydrogenase and ferredoxin in methanogenesis and carbon fixation.

Authors:  Jörn Meuer; H Craig Kuettner; Jun Kai Zhang; Reiner Hedderich; William W Metcalf
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

7.  Mechanistic studies of the coenzyme F420 reducing formate dehydrogenase from Methanobacterium formicicum.

Authors:  N L Schauer; J G Ferry; J F Honek; W H Orme-Johnson; C Walsh
Journal:  Biochemistry       Date:  1986-11-04       Impact factor: 3.162

8.  The tungsten formylmethanofuran dehydrogenase from Methanobacterium thermoautotrophicum contains sequence motifs characteristic for enzymes containing molybdopterin dinucleotide.

Authors:  A Hochheimer; R A Schmitz; R K Thauer; R Hedderich
Journal:  Eur J Biochem       Date:  1995-12-15

9.  Pathway of glycogen metabolism in Methanococcus maripaludis.

Authors:  J P Yu; J Ladapo; W B Whitman
Journal:  J Bacteriol       Date:  1994-01       Impact factor: 3.490

10.  Physiological importance of the heterodisulfide of coenzyme M and 7-mercaptoheptanoylthreonine phosphate in the reduction of carbon dioxide to methane in Methanobacterium.

Authors:  T A Bobik; R S Wolfe
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

View more
  41 in total

1.  The Wolfe cycle comes full circle.

Authors:  Rudolf K Thauer
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-05       Impact factor: 11.205

2.  Genome-scale analysis of gene function in the hydrogenotrophic methanogenic archaeon Methanococcus maripaludis.

Authors:  Felipe Sarmiento; Jan Mrázek; William B Whitman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-04       Impact factor: 11.205

3.  Random mutagenesis identifies factors involved in formate-dependent growth of the methanogenic archaeon Methanococcus maripaludis.

Authors:  Christian Sattler; Sandro Wolf; Julia Fersch; Stefan Goetz; Michael Rother
Journal:  Mol Genet Genomics       Date:  2013-06-26       Impact factor: 3.291

4.  Hydrogenase-independent uptake and metabolism of electrons by the archaeon Methanococcus maripaludis.

Authors:  Svenja T Lohner; Jörg S Deutzmann; Bruce E Logan; John Leigh; Alfred M Spormann
Journal:  ISME J       Date:  2014-05-20       Impact factor: 10.302

Review 5.  Energy Conservation and Hydrogenase Function in Methanogenic Archaea, in Particular the Genus Methanosarcina.

Authors:  Thomas D Mand; William W Metcalf
Journal:  Microbiol Mol Biol Rev       Date:  2019-09-18       Impact factor: 11.056

6.  Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments.

Authors:  Patrick Browne; Hideyuki Tamaki; Nikos Kyrpides; Tanja Woyke; Lynne Goodwin; Hiroyuki Imachi; Suzanna Bräuer; Joseph B Yavitt; Wen-Tso Liu; Stephen Zinder; Hinsby Cadillo-Quiroz
Journal:  ISME J       Date:  2016-08-23       Impact factor: 10.302

Review 7.  Energy-converting hydrogenases: the link between H2 metabolism and energy conservation.

Authors:  Marie Charlotte Schoelmerich; Volker Müller
Journal:  Cell Mol Life Sci       Date:  2019-10-19       Impact factor: 9.261

8.  Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure.

Authors:  Julius K Demmer; Haiyan Huang; Shuning Wang; Ulrike Demmer; Rudolf K Thauer; Ulrich Ermler
Journal:  J Biol Chem       Date:  2015-07-02       Impact factor: 5.157

9.  Effects of H2 and formate on growth yield and regulation of methanogenesis in Methanococcus maripaludis.

Authors:  Kyle C Costa; Sung Ho Yoon; Min Pan; June A Burn; Nitin S Baliga; John A Leigh
Journal:  J Bacteriol       Date:  2013-01-18       Impact factor: 3.490

10.  H2 metabolism is widespread and diverse among human colonic microbes.

Authors:  Patricia G Wolf; Ambarish Biswas; Sergio E Morales; Chris Greening; H Rex Gaskins
Journal:  Gut Microbes       Date:  2016-05-03
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.