Literature DB >> 22869135

Crystallization and preliminary X-ray analysis of Pac17 from the pacidamycin-biosynthetic cluster of Streptomyces coeruleorubidus.

Daniel R Tromans1, Clare E M Stevenson, Rebecca J M Goss, David M Lawson.   

Abstract

Pac17 is an uncharacterized protein from the pacidamycin gene cluster of the soil bacterium Streptomyces coeruleorubidus. It is implicated in the biosynthesis of the core diaminobutyric acid residue of the antibiotic, although its precise role is uncertain at present. Given that pacidamycins inhibit translocase I of Pseudomonas aeruginosa, a clinically unexploited antibiotic target, they offer new hope in the search for antibacterial agents directed against this important pathogen. Crystals of Pac17 were grown by vapour diffusion and X-ray data were collected at a synchrotron to a resolution of 1.9 Å from a single crystal. The crystal belonged to space group C2, with unit-cell parameters a = 214.12, b = 70.88, c = 142.22 Å, β = 92.96°. Preliminary analysis of these data suggests that the asymmetric unit consists of one Pac17 homotetramer, with an estimated solvent content of 49.0%.

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Year:  2012        PMID: 22869135      PMCID: PMC3412786          DOI: 10.1107/S1744309112029144

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

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2.  Sequencing and analysis of the biosynthetic gene cluster of the lipopeptide antibiotic Friulimicin in Actinoplanes friuliensis.

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Journal:  Antimicrob Agents Chemother       Date:  2007-01-12       Impact factor: 5.191

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

Review 4.  Antimicrobial nucleoside antibiotics targeting cell wall assembly: recent advances in structure-function studies and nucleoside biosynthesis.

Authors:  Michael Winn; Rebecca J M Goss; Ken-ichi Kimura; Timothy D H Bugg
Journal:  Nat Prod Rep       Date:  2009-12-16       Impact factor: 13.423

5.  Friulimicins: novel lipopeptide antibiotics with peptidoglycan synthesis inhibiting activity from Actinoplanes friuliensis sp. nov. II. Isolation and structural characterization.

Authors:  L Vértesy; E Ehlers; H Kogler; M Kurz; J Meiwes; G Seibert; M Vogel; P Hammann
Journal:  J Antibiot (Tokyo)       Date:  2000-08       Impact factor: 2.649

6.  Identification of the biosynthetic gene cluster for the pacidamycin group of peptidyl nucleoside antibiotics.

Authors:  Wenjun Zhang; Bohdan Ostash; Christopher T Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-08       Impact factor: 11.205

7.  Mureidomycin A, a new inhibitor of bacterial peptidoglycan synthesis.

Authors:  F Isono; M Inukai
Journal:  Antimicrob Agents Chemother       Date:  1991-02       Impact factor: 5.191

Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

9.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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