Literature DB >> 22851688

Sequential eukaryotic translation initiation factor 5 (eIF5) binding to the charged disordered segments of eIF4G and eIF2β stabilizes the 48S preinitiation complex and promotes its shift to the initiation mode.

Chingakham Ranjit Singh1, Ryosuke Watanabe, Wasimul Chowdhury, Hiroyuki Hiraishi, Marcelo J Murai, Yasufumi Yamamoto, David Miles, Yuka Ikeda, Masayo Asano, Katsura Asano.   

Abstract

During translation initiation in Saccharomyces cerevisiae, an Arg- and Ser-rich segment (RS1 domain) of eukaryotic translation initiation factor 4G (eIF4G) and the Lys-rich segment (K-boxes) of eIF2β bind three common partners, eIF5, eIF1, and mRNA. Here, we report that both of these segments are involved in mRNA recruitment and AUG recognition by distinct mechanisms. First, the eIF4G-RS1 interaction with the eIF5 C-terminal domain (eIF5-CTD) directly links eIF4G to the preinitiation complex (PIC) and enhances mRNA binding. Second, eIF2β-K-boxes increase mRNA binding to the 40S subunit in vitro in a manner reversed by the eIF5-CTD. Third, mutations altering eIF4G-RS1, eIF2β-K-boxes, and eIF5-CTD restore the accuracy of start codon selection impaired by an eIF2β mutation in vivo, suggesting that the mutual interactions of the eIF segments within the PIC prime the ribosome for initiation in response to start codon selection. We propose that the rearrangement of interactions involving the eIF5-CTD promotes mRNA recruitment through mRNA binding by eIF4G and eIF2β and assists the start codon-induced release of eIF1, the major antagonist of establishing tRNA(i)(Met):mRNA binding to the P site.

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Year:  2012        PMID: 22851688      PMCID: PMC3457530          DOI: 10.1128/MCB.00376-12

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

1.  A multifactor complex of eukaryotic initiation factors, eIF1, eIF2, eIF3, eIF5, and initiator tRNA(Met) is an important translation initiation intermediate in vivo.

Authors:  K Asano; J Clayton; A Shalev; A G Hinnebusch
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

2.  Characterization of a novel RNA-binding region of eIF4GI critical for ribosomal scanning.

Authors:  Déborah Prévôt; Didier Décimo; Cécile H Herbreteau; Florence Roux; Jérôme Garin; Jean-Luc Darlix; Théophile Ohlmann
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

Review 3.  Analysis and reconstitution of translation initiation in vitro.

Authors:  Katsura Asano; Lon Phan; Thanuja Krishnamoorthy; Graham D Pavitt; Edith Gomez; Ernest M Hannig; Joseph Nika; Thomas F Donahue; Han-kuei Huang; Alan G Hinnebusch
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

4.  The C-terminal domain of eukaryotic initiation factor 5 promotes start codon recognition by its dynamic interplay with eIF1 and eIF2β.

Authors:  Rafael E Luna; Haribabu Arthanari; Hiroyuki Hiraishi; Jagpreet Nanda; Pilar Martin-Marcos; Michelle A Markus; Barak Akabayov; Alexander G Milbradt; Lunet E Luna; Hee-Chan Seo; Sven G Hyberts; Amr Fahmy; Mikhail Reibarkh; David Miles; Patrick R Hagner; Elizabeth M O'Day; Tingfang Yi; Assen Marintchev; Alan G Hinnebusch; Jon R Lorsch; Katsura Asano; Gerhard Wagner
Journal:  Cell Rep       Date:  2012-05-24       Impact factor: 9.423

5.  Association of the yeast poly(A) tail binding protein with translation initiation factor eIF-4G.

Authors:  S Z Tarun; A B Sachs
Journal:  EMBO J       Date:  1996-12-16       Impact factor: 11.598

6.  Interactions of eukaryotic translation initiation factor 3 (eIF3) subunit NIP1/c with eIF1 and eIF5 promote preinitiation complex assembly and regulate start codon selection.

Authors:  Leos Valásek; Klaus H Nielsen; Fan Zhang; Christie A Fekete; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

7.  The yeast eukaryotic initiation factor 4G (eIF4G) HEAT domain interacts with eIF1 and eIF5 and is involved in stringent AUG selection.

Authors:  Hui He; Tobias von der Haar; C Ranjit Singh; Miki Ii; Bin Li; Alan G Hinnebusch; John E G McCarthy; Katsura Asano
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

8.  RNA-binding activity of translation initiation factor eIF4G1 from Saccharomyces cerevisiae.

Authors:  Catherine Berset; Andreas Zurbriggen; Siamak Djafarzadeh; Michael Altmann; Hans Trachsel
Journal:  RNA       Date:  2003-07       Impact factor: 4.942

9.  Identification and characterization of cap-binding proteins from yeast.

Authors:  C Goyer; M Altmann; H Trachsel; N Sonenberg
Journal:  J Biol Chem       Date:  1989-05-05       Impact factor: 5.157

10.  Mutations in GCD11, the structural gene for eIF-2 gamma in yeast, alter translational regulation of GCN4 and the selection of the start site for protein synthesis.

Authors:  D R Dorris; F L Erickson; E M Hannig
Journal:  EMBO J       Date:  1995-05-15       Impact factor: 11.598

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  19 in total

Review 1.  The role of the poly(A) binding protein in the assembly of the Cap-binding complex during translation initiation in plants.

Authors:  Daniel R Gallie
Journal:  Translation (Austin)       Date:  2014-10-30

2.  Interaction between 25S rRNA A loop and eukaryotic translation initiation factor 5B promotes subunit joining and ensures stringent AUG selection.

Authors:  Hiroyuki Hiraishi; Byung-Sik Shin; Tsuyoshi Udagawa; Naoki Nemoto; Wasimul Chowdhury; Jymie Graham; Christian Cox; Megan Reid; Susan J Brown; Katsura Asano
Journal:  Mol Cell Biol       Date:  2013-07-08       Impact factor: 4.272

3.  Mechanism of cytoplasmic mRNA translation.

Authors:  Karen S Browning; Julia Bailey-Serres
Journal:  Arabidopsis Book       Date:  2015-04-24

4.  Regulation of Hypoxia-Inducible Factor 1α during Hypoxia by DAP5-Induced Translation of PHD2.

Authors:  Jeffrey D Bryant; Michael C Brown; Mikhail I Dobrikov; Elena Y Dobrikova; Sarah L Gemberling; Qing Zhang; Matthias Gromeier
Journal:  Mol Cell Biol       Date:  2018-05-15       Impact factor: 4.272

5.  Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.

Authors:  Eiji Obayashi; Rafael E Luna; Takashi Nagata; Pilar Martin-Marcos; Hiroyuki Hiraishi; Chingakham Ranjit Singh; Jan Peter Erzberger; Fan Zhang; Haribabu Arthanari; Jacob Morris; Riccardo Pellarin; Chelsea Moore; Ian Harmon; Evangelos Papadopoulos; Hisashi Yoshida; Mahmoud L Nasr; Satoru Unzai; Brytteny Thompson; Eric Aube; Samantha Hustak; Florian Stengel; Eddie Dagraca; Asokan Ananbandam; Philip Gao; Takeshi Urano; Alan G Hinnebusch; Gerhard Wagner; Katsura Asano
Journal:  Cell Rep       Date:  2017-03-14       Impact factor: 9.423

6.  Dynamic Interaction of Eukaryotic Initiation Factor 4G1 (eIF4G1) with eIF4E and eIF1 Underlies Scanning-Dependent and -Independent Translation.

Authors:  Ora Haimov; Urmila Sehrawat; Ana Tamarkin-Ben Harush; Anat Bahat; Anna Uzonyi; Alexander Will; Hiroyuki Hiraishi; Katsura Asano; Rivka Dikstein
Journal:  Mol Cell Biol       Date:  2018-08-28       Impact factor: 4.272

7.  The interaction between eukaryotic initiation factor 1A and eIF5 retains eIF1 within scanning preinitiation complexes.

Authors:  Rafael E Luna; Haribabu Arthanari; Hiroyuki Hiraishi; Barak Akabayov; Leiming Tang; Christian Cox; Michelle A Markus; Lunet E Luna; Yuka Ikeda; Ryosuke Watanabe; Edward Bedoya; Cathy Yu; Shums Alikhan; Gerhard Wagner; Katsura Asano
Journal:  Biochemistry       Date:  2013-12-19       Impact factor: 3.162

8.  Eukaryotic Initiation Factor eIFiso4G1 and eIFiso4G2 Are Isoforms Exhibiting Distinct Functional Differences in Supporting Translation in Arabidopsis.

Authors:  Daniel R Gallie
Journal:  J Biol Chem       Date:  2015-11-17       Impact factor: 5.157

9.  The stringency of start codon selection in the filamentous fungus Neurospora crassa.

Authors:  Jiajie Wei; Ying Zhang; Ivaylo P Ivanov; Matthew S Sachs
Journal:  J Biol Chem       Date:  2013-02-08       Impact factor: 5.157

10.  Human oncoprotein 5MP suppresses general and repeat-associated non-AUG translation via eIF3 by a common mechanism.

Authors:  Chingakham Ranjit Singh; M Rebecca Glineburg; Chelsea Moore; Naoki Tani; Rahul Jaiswal; Ye Zou; Eric Aube; Sarah Gillaspie; Mackenzie Thornton; Ariana Cecil; Madelyn Hilgers; Azuma Takasu; Izumi Asano; Masayo Asano; Carlos R Escalante; Akira Nakamura; Peter K Todd; Katsura Asano
Journal:  Cell Rep       Date:  2021-07-13       Impact factor: 9.423

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